New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1852547NA (NA)4 (0.040) 4/156 NT NA intergenic (+19/+74) pncA/ydjE nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein
?NC_000913 = 1852558 NA (NA)intergenic (+30/+63) pncA/ydjE nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein

Only 100 of 150 total aligned reads displayed.

TGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCC  >  NC_000913/1852450‑1852645
                                                                                                 |                                                                                                  
tGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTc                                                                                                  >  1:1585082/1‑100 (MQ=255)
tGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTc                                                                                                  <  2:2321307/100‑1 (MQ=255)
  cgcACGCGTTTGTGGTGATGTCAGCAGCGGGTGCTACGCTATATACGCTGGCTGACTGGGAAGAGACGCTGGTGTAATTTTACTCTTGTCTTCAATTCTg                                                                                                <  1:126663/100‑1 (MQ=255)
   gcACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGt                                                                                               >  2:2206908/1‑100 (MQ=255)
    cACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTa                                                                                              >  2:2913080/1‑100 (MQ=255)
    cACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTa                                                                                              >  1:387133/1‑100 (MQ=255)
       gcgTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTg                                                                                           <  1:1300332/100‑1 (MQ=255)
        cgTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTgg                                                                                          <  1:1678850/100‑1 (MQ=255)
        cgTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTgg                                                                                          <  1:279120/100‑1 (MQ=255)
         gTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGc                                                                                         <  2:1062747/100‑1 (MQ=255)
          tttATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCa                                                                                        <  2:2484363‑M2/100‑2 (MQ=255)
           ttATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCat                                                                                       >  1:2570352‑M2/1‑98 (MQ=255)
             aTGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattg                                                                                     >  1:1793352‑M2/1‑96 (MQ=255)
              tGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACACTTCTGTACTGGCattgt                                                                                    <  2:812554‑M2/100‑6 (MQ=255)
              tGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgt                                                                                    <  2:2426117‑M2/100‑6 (MQ=255)
               ggAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgta                                                                                   <  2:1706941‑M2/100‑7 (MQ=255)
                 agaTGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgtagn                                                                                 >  1:1583174‑M2/1‑92 (MQ=255)
                 agaTGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgtagg                                                                                 >  1:38238‑M2/1‑92 (MQ=255)
                  gaTGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgtaggc                                                                                >  1:2850985‑M2/1‑91 (MQ=255)
                   tttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGc                                                                                >  2:356166‑M1/77‑99 (MQ=255)
                   tttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGc                                                                                >  1:1429959‑M1/77‑99 (MQ=255)
                    tGTCAACAGCTCGGGCAACGCGATATACGCTGGCAGACCGGGAAGAGACACATGGGTAATTTTACGCTGGCCTACAATgccagtacagaattgtagg                                                                                 <  1:2973645‑M1/97‑20 (MQ=255)
                     gTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATgccagtacagaattgtaggccag                                                                             <  1:703767‑M1/100‑24 (MQ=255)
                       cagcagCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAAt                                                                           >  1:428504/1‑100 (MQ=255)
                       cagcagCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAAt                                                                           >  1:1232851/1‑100 (MQ=255)
                        agcagcTGGGGCAACGCTATATACGCTGGCAGAGTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGCAGGCCAAATa                                                                          >  1:2002427/1‑100 (MQ=255)
                         gcagcTGGGGCAACGCTATAGACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATgccagtacagaattgtaggccagcgta                                                                         <  1:736964‑M1/100‑28 (MQ=255)
                            tgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAac                                                                      >  1:2165287‑M1/68‑100 (MQ=255)
                             cTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGACACACAGGGGTAATTTTACGTTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAac                                                                      <  1:1666134/99‑1 (MQ=255)
                              tGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAacac                                                                    >  1:304851/1‑100 (MQ=255)
                               ggttcAACGCTGTATACGCTTGCAGACTGGGAAGATACACAGGTGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACg                                                                   <  2:252454/96‑1 (MQ=255)
                                 ggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTc                                                                 <  2:396091/100‑1 (MQ=255)
                                 ggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTc                                                                 <  2:118359/100‑1 (MQ=255)
                                 ggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTc                                                                 >  2:3044195/1‑100 (MQ=255)
                                  gCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCa                                                                <  2:131312/100‑1 (MQ=255)
                                     aCGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTg                                                             <  1:2303095/100‑1 (MQ=255)
                                     aCGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTg                                                             <  2:2892341/100‑1 (MQ=255)
                                     aCGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTg                                                             >  1:758190/1‑100 (MQ=255)
                                        cTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGca                                                          <  1:2505922/100‑1 (MQ=255)
                                         tatataCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGcac                                                         >  2:2832178/1‑100 (MQ=255)
                                          atataCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGcaca                                                        >  1:138176/1‑100 (MQ=255)
                                           tataCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACAt                                                       >  2:1720508/1‑100 (MQ=255)
                                            ataCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACACTTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATc                                                      >  1:3045493/1‑100 (MQ=255)
                                             taCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCt                                                     >  1:2586340/1‑100 (MQ=255)
                                              ttccgatctgACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTg                                                    <  1:778812/91‑1 (MQ=255)
                                               cGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTgg                                                   >  2:1635954/1‑100 (MQ=255)
                                               cGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTgg                                                   <  1:1067120/100‑1 (MQ=255)
                                                gCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGc                                                  <  2:2709467/100‑1 (MQ=255)
                                                gCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGc                                                  >  2:2921484/1‑100 (MQ=255)
                                                gCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGc                                                  <  2:3034024/100‑1 (MQ=255)
                                                  tGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCaa                                                >  2:2166453/1‑100 (MQ=255)
                                                   ggCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAAt                                               >  2:1303410/1‑100 (MQ=255)
                                                     cAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTg                                             >  2:1524148/1‑100 (MQ=255)
                                                      aGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGa                                            <  2:1164432/100‑1 (MQ=255)
                                                       gACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTgagatcggaa                                           >  2:778817/1‑91 (MQ=255)
                                                       gACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGAt                                           <  1:2390443/100‑1 (MQ=255)
                                                       gACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGAt                                           >  1:1684119/1‑100 (MQ=255)
                                                        aCTGGGAAGAGACACATGTGTAATTTTACGCTGTGCTACAATTCTGTAATGGCACTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGAta                                          <  1:2903681/100‑2 (MQ=255)
                                                        aCTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATg                                          <  2:1987434/100‑1 (MQ=255)
                                                         cTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGc                                         >  2:529308/1‑100 (MQ=255)
                                                         cTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGc                                         >  2:585928/1‑100 (MQ=255)
                                                            ggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCAt                                      <  1:2106908/100‑1 (MQ=255)
                                                            ggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCAt                                      >  2:926271/1‑100 (MQ=255)
                                                             gAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCAt                                      >  1:2912348/1‑99 (MQ=255)
                                                              aaGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCa                                    >  1:1474982/1‑100 (MQ=255)
                                                               agagACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtat                                   <  2:148786‑M2/100‑55 (MQ=255)
                                                                gagaCACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAAc                                  >  1:569314/1‑100 (MQ=255)
                                                                gagaCACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAAc                                  >  1:675280/1‑100 (MQ=255)
                                                                 agaCACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACg                                 <  2:298280/100‑1 (MQ=255)
                                                                  gaCACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACGGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACg                                 <  1:465759/99‑1 (MQ=255)
                                                                    cacaGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGaaa                              <  2:2215378/100‑1 (MQ=255)
                                                                      caGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGa                            >  1:1672441/1‑100 (MQ=255)
                                                                      caGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGa                            >  2:1037246/1‑100 (MQ=255)
                                                                      caGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGa                            >  1:2780507/1‑100 (MQ=255)
                                                                      caGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGa                            >  2:725695/1‑100 (MQ=255)
                                                                        ggggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGAtt                          >  1:2381477/1‑100 (MQ=255)
                                                                         gggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGAttt                         >  2:2530064/1‑100 (MQ=255)
                                                                          ggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTa                        >  2:2485839/1‑100 (MQ=255)
                                                                          ggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTa                        <  2:2291075/100‑1 (MQ=255)
                                                                           gTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTaa                       >  2:1064931/1‑100 (MQ=255)
                                                                            tAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAAt                      >  2:1915951/1‑100 (MQ=255)
                                                                                tttACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCAc                  >  1:2512668/1‑100 (MQ=255)
                                                                                 ttACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCAcc                 <  2:2618908/100‑1 (MQ=255)
                                                                                  tACGCTGGCCTACAATTCTGTACTGGCattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtctatagcgttgccccagctgc                <  1:736964‑M2/100‑74 (MQ=255)
                                                                                    cGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATCGATGCCATCAACGAAAGATTTAATTCACCTCa              >  2:2201532/1‑100 (MQ=255)
                                                                                     gCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAg             <  2:951150/100‑1 (MQ=255)
                                                                                       tGGCCTACAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgaca           <  2:2852580‑M1/100‑90 (MQ=255)
                                                                                         gcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAt         <  1:114047‑M1/94‑1 (MQ=255)
                                                                                         gCCTACAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatc         >  1:2850985‑M1/1‑9 (MQ=255)
                                                                                          cctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTAGCACATCTGGCAATTGATGCCATCAACCAAAGATTTAATTCACCTCAGAAAt         <  1:2343317‑M1/94‑1 (MQ=255)
                                                                                          ccTACAATTCTGTACTGGCattgtaggccagcgtaaaattacccatgtgtctcttcccggtctgccagcgtatatcgcgttgcccgagctgttgaca           <  1:2973645‑M2/97‑79 (MQ=255)
                                                                                            tacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtctc      <  1:2140431‑M1/97‑1 (MQ=255)
                                                                                            tACAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatctcc      >  1:633604‑M1/1‑6 (MQ=255)
                                                                                             acAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATctct     >  1:926266‑M1/3‑100 (MQ=255)
                                                                                             acAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATctct     <  2:614539‑M1/98‑1 (MQ=255)
                                                                                             aCAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatctcca     <  2:2426117‑M1/100‑96 (MQ=255)
                                                                                             aCAATgccagtacagaagtgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatctcca     <  2:812554‑M1/100‑96 (MQ=255)
                                                                                              cAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatctccat    >  2:2631547‑M1/1‑4 (MQ=255)
                                                                                              cAATgccagtacagaattgtaggccagcgtaaaattacccctgtgtctcttcccagtctgccagcgtatatagcgttgccccagctgctgacatctccat    >  1:1793352‑M1/1‑4 (MQ=255)
                                                                                                ATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTcc  >  2:1646929‑M1/1‑100 (MQ=255)
                                                                                                 |                                                                                                  
TGCGCACGCGTTTATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCC  >  NC_000913/1852450‑1852645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.