BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3281702 =	NA (NA)	7 (0.070)	5/164	NT	NA	noncoding (1/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3281734 =	NA (NA)	7 (0.070)	5/164	NT	NA	noncoding (33/82 nt)	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP239 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 164 total aligned reads displayed.

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

ccTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTCCAGCGGTGTCGAATTCGACGCTAACGCGTCTTATCCGAcc                                                                                                     >  1:735669/1‑100 (MQ=255)

aggaagcaaaagggattgctggatgcggcgcaaacgctttatccggccttgcggtcaccaactgtagGTCGGATGCGACGCTAACGCGTCTTATCCGAcc                                                                                                     >  2:994039‑M1/68‑100 (MQ=255)

 cTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTTTCGGATGCGACGCTAACGCGTCTTATCCGACCt                                                                                                    >  1:2717110/1‑100 (MQ=255)

 cTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCt                                                                                                    >  2:540548/1‑100 (MQ=255)

 cTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCt                                                                                                    >  2:2147656/1‑100 (MQ=255)

 cTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCt                                                                                                    <  2:2073691/100‑1 (MQ=255)

      ttGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGt                                                                                               <  1:2711672/100‑1 (MQ=255)

      ttGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGt                                                                                               >  2:1755640/1‑100 (MQ=255)

      ttGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGt                                                                                               >  2:1809610/1‑100 (MQ=255)

        gggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTg                                                                                             <  1:430542/100‑1 (MQ=255)

         ggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTgg                                                                                            <  2:1913572/100‑1 (MQ=255)

         ggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTgg                                                                                            <  2:2094916/100‑1 (MQ=255)

         ggCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTgg                                                                                            <  2:2190126/100‑1 (MQ=255)

          gCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCGGCGGTGTCGGATGCGACCCTAACGCGTCTTATACGACCTCCAGTTgat                                                                                           >  2:3014220/1‑98 (MQ=38)

          gCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGt                                                                                           <  1:1550387/100‑1 (MQ=255)

          gCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGt                                                                                           >  2:2347415/1‑100 (MQ=255)

          gCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGt                                                                                           >  1:353154/1‑100 (MQ=255)

           ccTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTg                                                                                          >  1:2806215/1‑100 (MQ=255)

            cTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGa                                                                                         >  2:1067497/1‑100 (MQ=255)

             ttCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAc                                                                                        >  1:1092655/1‑100 (MQ=255)

              tCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGAcc                                                                                       >  2:2520733/1‑100 (MQ=255)

               cACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCg                                                                                      >  1:1294302/1‑100 (MQ=255)

                aCTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGc                                                                                     <  2:2886569/100‑1 (MQ=255)

                    cccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAgg                                                                                 <  2:1184121/100‑1 (MQ=255)

                    cccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGGTGGTGACCGCAAgg                                                                                 >  1:2240041/1‑100 (MQ=255)

                     ccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGGGTCTTATCCGACCTACAGTTGGTGACCGCAAGGc                                                                                >  2:2904090/1‑100 (MQ=255)

                     ccccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGc                                                                                >  2:1407799/1‑100 (MQ=255)

                       ccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCg                                                                              >  2:1747047/1‑100 (MQ=255)

                       ccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAACTACAGTTGGTGACCGCAAGGCCg                                                                              >  1:2228655/1‑100 (MQ=255)

                       ccGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGAACTACAGTTGGGGACCGCAAgg                                                                                 >  1:755825/1‑97 (MQ=255)

                        cGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCgg                                                                             <  1:1462340/100‑1 (MQ=255)

                        cGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCgg                                                                             <  1:3010964/100‑1 (MQ=255)

                         gTAAGGCCTTTCTTTTTCGTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCgg                                                                             <  1:239357/99‑1 (MQ=255)

                           aaGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATa                                                                          <  1:2802698/100‑1 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      <  2:14869/100‑1 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      >  1:1915762/1‑100 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      >  1:2065581/1‑100 (MQ=255)

                               ccTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGc                                                                      >  1:750528/1‑100 (MQ=255)

                                   tctttttttttTGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGTTAAAGCGttt                                                                  >  1:2447429/1‑100 (MQ=255)

                                   tctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGttt                                                                  >  1:929912/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  1:551313/1‑100 (MQ=255)

                                    ctttttctttCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTg                                                                 >  2:236626/1‑100 (MQ=255)

                                       tttctttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTgcgc                                                              <  1:2909222/100‑1 (MQ=255)

                                         tctttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGcgccg                                                            <  1:1319686/100‑1 (MQ=255)

                                           tttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCa                                                          <  1:1197577/100‑1 (MQ=255)

                                           tttcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCa                                                          <  2:2533615/100‑1 (MQ=255)

                                             tcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATc                                                        <  2:745894/100‑1 (MQ=255)

                                             tcGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATc                                                        >  2:133435/1‑100 (MQ=255)

                                               gTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCa                                                      >  1:831605/1‑100 (MQ=255)

                                                ttttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAg                                                     >  1:3002873/1‑100 (MQ=255)

                                                 tttGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGc                                                    <  2:2240054/100‑1 (MQ=255)

                                                   tGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCa                                                   >  2:2950052/1‑99 (MQ=255)

                                                     aTCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATc                                                <  2:40064/100‑1 (MQ=255)

                                                       cTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATcc                                               <  2:418857/99‑1 (MQ=255)

                                                        tgtgCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATccc                                              >  2:21668/1‑99 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  1:575986/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          <  2:1424087/100‑1 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  2:1635055/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          >  2:260053/1‑100 (MQ=255)

                                                           gCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCtttt                                          <  1:1147266/100‑1 (MQ=255)

                                                            cAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTg                                         <  2:1964404/100‑1 (MQ=255)

                                                              gCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCt                                       >  2:108942/1‑100 (MQ=255)

                                                                ggTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTc                                     >  2:555769/1‑100 (MQ=255)

                                                                 gtgtCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTcc                                    <  2:1839083/100‑1 (MQ=255)

                                                                 gtgtCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTcc                                    <  1:2313537/100‑1 (MQ=255)

                                                                 aggtcggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTcc                                    >  2:796040‑M2/35‑100 (MQ=255)

                                                                   GTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  2:755830‑M1/1‑100 (MQ=255)

                                                                   GTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCtt                                  >  2:984057‑M1/1‑100 (MQ=255)

                                                                    TCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCttt                                 >  1:797660‑M1/1‑100 (MQ=255)

                                                                      ggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAt                               >  2:1080895‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAt                               >  2:1047106‑M2/30‑100 (MQ=255)

                                                                      GGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAt                               <  1:75642‑M1/100‑1 (MQ=255)

                                                                       gataagacgcgttagcgtcttatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCGTTAtc                              >  2:1171440‑M2/29‑100 (MQ=255)

                                                                        ATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCt                             >  2:2391325‑M1/1‑100 (MQ=255)

                                                                            gACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttc                         >  2:2050155/1‑100 (MQ=255)

                                                                             aCGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtctttttt                        <  2:2065593/100‑3 (MQ=255)

                                                                             aCGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttct                        <  2:74085/100‑1 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       <  2:1335268/100‑1 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       >  2:2285872/1‑100 (MQ=255)

                                                                              cGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttctt                       <  1:1018422/100‑1 (MQ=255)

                                                                               gCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttcttt                      <  1:1755630/100‑1 (MQ=255)

                                                                               gCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTAtcttttcttt                      <  1:2843624/100‑1 (MQ=255)

                                                                                cgttagcgtcgcatccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTtttctttc                     >  1:2507486‑M2/20‑100 (MQ=255)

                                                                                cTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTtttctttc                     >  1:2747850/1‑100 (MQ=255)

                                                                                  aaCGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCaa                   >  1:1655113/1‑100 (MQ=255)

                                                                                    cgcgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACg                 <  2:3046536/100‑1 (MQ=255)

                                                                                    cgagTCTTATCCGACTTACAGTTGGTGACCGCAAGTCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCGAc                  <  1:825610/96‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGAt               >  1:915695/1‑100 (MQ=255)

                                                                                       gTCTTATCCGTCCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCTAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  2:1835723/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              >  1:296262/1‑100 (MQ=255)

                                                                                        tCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATca             >  1:1334512/1‑100 (MQ=255)

                                                                                        tCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATca             <  2:75643/100‑1 (MQ=255)

                                                                                          ttATCCGACCTACAGCTGGTCACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCACTCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATc              <  1:162682/97‑1 (MQ=255)

                                                                                            atccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACaaa         >  1:938123‑M2/8‑100 (MQ=255)

                                                                                              ccgacCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAAtt       <  2:2768488‑M2/95‑1 (MQ=255)

                                                                                                 acCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCg    <  1:1747037‑M2/98‑1 (MQ=255)

                                                                                                 acCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCg    <  2:353158‑M2/98‑1 (MQ=255)

                                                                                                  cCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGt   <  1:2106329‑M2/99‑1 (MQ=255)

                                                                                                  cCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGt   <  2:910235‑M2/99‑1 (MQ=255)

                                                                                                   cTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGtt  <  2:2661935/100‑1 (MQ=255)

CCTTTATTGGGCCTTCACTTCCCCCGTAAGGCCTTTCTTTTTCTTTCGTTTTGATCTGTGCAGCGGTGTCGGATGCGACGCTAACGCGTCTTATCCGACCTACAGTTGGTGACCGCAAGGCCGGATAAAGCGTTTGCGCCGCATCCAGCAATCCCTTTTGCTTCCTTTATCTTTTCTTTCAACGATCACAAATTTCGTT  >  NC_000913/3281635‑3281833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.