New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 3620123 = | NA (NA) | 3 (0.030) | 3/166 | NT | 100% | coding (932/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
? | NC_000913 | 3620147 = | 0 (0.000) | coding (956/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC > NC_000913/3620049‑3620246 | ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc < 1:1974165‑M2/2‑1 (MQ=255) ccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagc < 2:1310794‑M2/2‑1 (MQ=255) cggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcg > 1:1279181‑M2/98‑100 (MQ=255) cggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcg < 1:139830‑M2/3‑1 (MQ=255) ggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg > 1:1229424‑M2/97‑100 (MQ=255) ggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg < 2:629590‑M2/4‑1 (MQ=255) ggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcgg > 1:2379941‑M2/97‑100 (MQ=255) ggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcatggcgtccagccatagcgcaccagcgg > 1:169667‑M2/97‑100 (MQ=255) gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 2:124942‑M2/5‑1 (MQ=255) gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggc < 2:2134677‑M2/5‑1 (MQ=255) gtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagtacgccgcgtggcgtccagccatagcgcaccagcggc > 2:2043739‑M2/96‑100 (MQ=255) tatttattatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg > 1:1981621‑M2/95‑100 (MQ=255) tatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagcggcg < 2:2464724‑M2/6‑1 (MQ=255) tttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccagatcggaa > 2:1692554‑M2/93‑93 (MQ=255) caccaccgccagttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTttact > 1:2490804‑M2/45‑100 (MQ=255) gccgcgtggcgtccagccatagcgcaccagcggcGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATa > 1:1115102‑M2/35‑100 (MQ=255) gttcgccgcgtggcgtccagccatagcgcaccaGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATaa > 2:585426‑M2/34‑100 (MQ=255) GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCGAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGAGGGTGGCGCACCGTcaca > 1:2978786‑M2/1‑99 (MQ=255) GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCACCCCGGTGCGCAGCTTTACTTACGATGATAACTCCCGGGGCCGGATGGTGGCGCACCGTCacac < 2:902953‑M2/100‑1 (MQ=255) GCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCacac > 2:1986283‑M2/1‑100 (MQ=255) | CAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACAC > NC_000913/3620049‑3620246 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |