BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4235425 =	NA (NA)	6 (0.060)	5/164	NT	NA	noncoding (5/77 nt)	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4235455 =	NA (NA)	6 (0.060)	5/164	NT	NA	noncoding (35/77 nt)	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP313 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 181 total aligned reads displayed.

GATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATT  >  NC_000913/4235357‑4235553

acgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttgccggataaggcgttcacgccgcatccggcaa                                                                                                   <  2:1660927‑M2/2‑1 (MQ=255)

 cgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                                                                                                  >  2:223135‑M1/68‑100 (MQ=255)

 cgatgtacatatcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGCCGGATAAGGCGTTCACGCCGCATCCGGCAAc                                                                                                  >  2:242669‑M1/68‑100 (MQ=255)

    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCg                                                                                                >  1:358609/1‑99 (MQ=255)

    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                                                               >  1:2950726/1‑100 (MQ=255)

    gCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGa                                                                                               >  1:2950680/1‑100 (MQ=255)

      tCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATg                                                                                             <  2:1226863/100‑1 (MQ=255)

        gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                                                           <  1:1101414/100‑1 (MQ=255)

        gACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGcc                                                                                           <  1:3016743/100‑1 (MQ=255)

         aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                                                                          <  2:2912890/100‑1 (MQ=255)

         aCCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCt                                                                                          >  2:2304570/1‑100 (MQ=255)

           cAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGa                                                                                        >  1:542780/1‑100 (MQ=255)

            tcggcatcgacctgtaggcctgataagacgcgaccgcgtcgcatcaggcatcggttGCCGGATAAGGCGTTCGCGCCGCATCCGGCAACCGATGCCTGAt                                                                                       >  1:2128625‑M1/57‑100 (MQ=255)

                gTCTTATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGa                                                                                   <  1:241676/100‑1 (MQ=255)

                 tCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAc                                                                                  >  1:1003740/1‑100 (MQ=255)

                    gATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                                                               >  1:709169/1‑100 (MQ=255)

                    gATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGAcgcg                                                                               >  2:2683642/1‑100 (MQ=255)

                     aTTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCgg                                                                              >  1:2641026/1‑100 (MQ=255)

                      ttAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGt                                                                             <  2:80891/100‑1 (MQ=255)

                       tAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTc                                                                            >  1:85296/1‑100 (MQ=255)

                         aCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                                                                          >  1:1737159/1‑100 (MQ=255)

                         aCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                                                                          >  1:1465571/1‑100 (MQ=255)

                         aCCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgc                                                                          >  2:47272/1‑100 (MQ=255)

                          ccGCTATAAAGCGTGGCGCGGTTAATCATCGTCGTTATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                                                                         <  1:1882579/100‑1 (MQ=255)

                          ccGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                                                                         >  1:1680198/1‑100 (MQ=255)

                          ccGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                                                                         >  2:662442/1‑100 (MQ=255)

                          ccGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                                                                         >  2:356711/1‑100 (MQ=255)

                          ccGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTcgcg                                                                         <  2:1524687/100‑1 (MQ=255)

                           cGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGt                                                                        >  2:2698756/1‑100 (MQ=255)

                            gCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                                                                       >  2:562671/1‑100 (MQ=255)

                            gCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTc                                                                       <  1:3035332/100‑1 (MQ=255)

                             cTATAAAGCGTGGCGCGGTTAATCACCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCt                                                                      <  1:2551520/100‑1 (MQ=255)

                               ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                                                                    <  2:1295928/100‑1 (MQ=255)

                               ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                                                                    >  1:2072084/1‑100 (MQ=255)

                               ataAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTa                                                                    >  2:2735564/1‑100 (MQ=255)

                                   aGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAg                                                                >  1:2782135/1‑100 (MQ=255)

                                     cGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATAAGACGCGACCGCGTCGCATCAGGc                                                              <  2:1635565/100‑1 (MQ=21)

                                      gTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGcc                                                             <  2:1994783/100‑1 (MQ=255)

                                        ggCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTa                                                           >  2:2819327/1‑100 (MQ=255)

                                         gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc                                                          <  2:1132763/100‑1 (MQ=255)

                                         gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc                                                          >  1:1073859/1‑100 (MQ=255)

                                         gcgcGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTAc                                                          >  2:2674907/1‑100 (MQ=255)

                                          cgcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACa                                                         <  2:780250/100‑1 (MQ=255)

                                           gcgGTTAATCATCGTCGATATGTAGGCCGGATAAGGTGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAg                                                        >  2:1560496/1‑100 (MQ=255)

                                            cgGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAgg                                                       <  1:2172325/100‑1 (MQ=255)

                                             ngTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGt                                                      >  1:28203/2‑100 (MQ=255)

                                                tAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGa                                                   >  2:91054/1‑100 (MQ=255)

                                                 aaTCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGAt                                                  >  2:74983/1‑100 (MQ=255)

                                                  atcatcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATg                                                 <  2:1696203/100‑1 (MQ=255)

                                                    catcGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGcc                                               >  1:586346/1‑100 (MQ=255)

                                                       cgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGat                                            <  1:2735548/100‑1 (MQ=255)

                                                       cgtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGat                                            >  1:1539220/1‑100 (MQ=255)

                                                        gtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata                                           <  1:74982/100‑1 (MQ=255)

                                                        gtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata                                           >  2:1540486/1‑100 (MQ=255)

                                                        gtcgATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGata                                           <  1:1465432/100‑1 (MQ=255)

                                                           gATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGt                                        >  2:1682672/1‑100 (MQ=255)

                                                           gATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGATCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGt                                        >  1:1663366/1‑100 (MQ=255)

                                                            atatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTa                                       <  1:2327782/100‑1 (MQ=255)

                                                            atatGTAGGCCGGATAAGGCGTGCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTa                                       <  1:1298267/100‑1 (MQ=255)

                                                             tatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTAc                                      >  2:2238314/1‑100 (MQ=255)

                                                             tatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTAc                                      >  2:976303/1‑100 (MQ=255)

                                                             tatGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTAc                                      >  2:1447525/1‑100 (MQ=255)

                                                              atGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACa                                     <  1:2160133/100‑1 (MQ=255)

                                                               tGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACAt                                    >  2:2280336/1‑100 (MQ=255)

                                                                gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATc                                   >  2:879932/1‑100 (MQ=255)

                                                                gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATc                                   <  1:356707/100‑1 (MQ=255)

                                                                 tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCg                                  >  1:1185837/1‑100 (MQ=255)

                                                                 tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCg                                  >  2:325289/1‑100 (MQ=255)

                                                                 gttgccggatgcggcgtgaacgccttatccggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCg                                  >  2:223135‑M2/34‑100 (MQ=255)

                                                                  ttgccggatgcggcgtgaacgccttatcaggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGt                                 >  2:1379522‑M2/33‑100 (MQ=255)

                                                                  aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGt                                 >  2:2528084/1‑100 (MQ=255)

                                                                   ggCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTa                                <  2:2950699/100‑1 (MQ=255)

                                                                     CCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAtt                              >  2:2657485‑M1/1‑100 (MQ=255)

                                                                        GATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTAttcag                           >  2:2072096‑M1/1‑98 (MQ=255)

                                                                        GATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCgg                           >  2:1073865‑M1/1‑100 (MQ=255)

                                                                          TAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCa                         >  2:1737169‑M1/1‑100 (MQ=255)

                                                                           aaGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCaa                        <  2:186407/100‑1 (MQ=255)

                                                                            aGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                       >  2:2424911/1‑100 (MQ=255)

                                                                            aGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                       <  2:2558467/100‑1 (MQ=255)

                                                                            aGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                       >  2:1372727/1‑100 (MQ=255)

                                                                            aGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAt                       >  2:1775554/1‑100 (MQ=255)

                                                                             ggCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAtt                      >  2:2456102/1‑100 (MQ=255)

                                                                             ggCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAAtt                      >  2:1019653/1‑100 (MQ=255)

                                                                             ggCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTGATCAGGCCTACAGGTGGATGCCGAGATGTACATCGTATTCGGCAAtt                      >  1:2061514/1‑100 (MQ=255)

                                                                              gCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTa                     <  2:134263/100‑1 (MQ=255)

                                                                                  gaacgccttatccggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATAc                 >  2:788800‑M2/17‑100 (MQ=255)

                                                                                   cACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACa                >  1:1799168/1‑100 (MQ=255)

                                                                                   cACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACa                >  1:2755347/1‑100 (MQ=255)

                                                                                     cgccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa              >  1:3050092/1‑100 (MQ=255)

                                                                                     cgccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa              <  1:2238301/100‑1 (MQ=255)

                                                                                     cgccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATa              <  1:2726602/100‑1 (MQ=255)

                                                                                      gccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAg             <  1:677900/100‑1 (MQ=255)

                                                                                       ccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGc            <  1:47271/100‑1 (MQ=255)

                                                                                       ccgcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGc            >  2:1347395/1‑100 (MQ=255)

                                                                                         gcATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCAc          <  1:1600759/100‑1 (MQ=255)

                                                                                           atccggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACga        <  1:795309‑M2/93‑1 (MQ=255)

                                                                                              cggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACCTCGTATTCGGCAATTAATACATAGCACgattg     >  1:1982100‑M2/5‑100 (MQ=255)

                                                                                              cggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACgattg     <  2:585703‑M2/96‑1 (MQ=255)

                                                                                               ggcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCATACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACCTAGCACgattga    >  2:611511‑M2/4‑100 (MQ=255)

                                                                                                gcAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACgattgat   <  1:2396029‑M2/98‑1 (MQ=255)

GATAGCTCGACCAATGGTCTGATTAACCGCTATAAAGCGTGGCGCGGTTAATCATCGTCGATATGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAACCGATGCCTGATGCGACGCGGTCGCGTCTTATCAGGCCTACAGGTCGATGCCGATATGTACATCGTATTCGGCAATTAATACATAGCACGATTGATT  >  NC_000913/4235357‑4235553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.