New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4627662 =117 (1.040)14 (0.130) 6/170 NT 11.6% coding (348/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 4627688 = 102 (0.950)coding (374/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

Only 100 of 156 total aligned reads displayed.

ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAG  >  NC_000913/4627589‑4627787
                                                                                                   |                                                                                                   
aCGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCg                                                                                                     >  1:2491820/1‑100 (MQ=255)
 gctccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGt                                                                                                    >  2:1372449‑M1/73‑100 (MQ=255)
 cGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCACAGCAGCCGACCGTGCCGGATCGTCTGCGt                                                                                                    <  2:2597627/100‑1 (MQ=255)
  gAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGtt                                                                                                   <  1:946112/100‑1 (MQ=255)
  gAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGtt                                                                                                   <  1:1549136/100‑1 (MQ=255)
   tccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  >  1:2331566‑M1/71‑100 (MQ=255)
   tccatgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  >  1:1844730‑M1/71‑100 (MQ=255)
   aGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTg                                                                                                  >  2:49707/1‑100 (MQ=255)
    gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                 <  2:2085009/100‑1 (MQ=255)
    gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                 <  2:1819952/100‑1 (MQ=255)
    gCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTgg                                                                                                 <  1:1188533/100‑1 (MQ=255)
     catgccctcttcgttgaaagcatgaatgcgaatatttttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                >  2:692581‑M1/69‑100 (MQ=255)
     catgccctcttcgttgaaagcatgaatgcgaatattcttctgatatttaaaagtttgcaataaccaacGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                >  2:774052‑M1/69‑100 (MQ=255)
     cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                <  2:404589/100‑1 (MQ=255)
     cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                <  2:69149/100‑1 (MQ=255)
     cTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGt                                                                                                <  2:198784/100‑1 (MQ=255)
      tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                               >  1:798020/1‑100 (MQ=255)
      tGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGtt                                                                                               <  2:87976/100‑1 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTggat                                                                                               >  1:1022354/1‑97 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                              >  1:590048/1‑100 (MQ=255)
       gCATATCATTATGGGTTTTGACGATACCCGTGACCACGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTa                                                                                              >  1:2927412/1‑100 (MQ=255)
        cATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGGAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAt                                                                                             >  2:2147514/1‑100 (MQ=255)
        cATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTAt                                                                                             >  1:2670707/1‑100 (MQ=255)
          tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                           >  2:2344678/1‑100 (MQ=255)
          tatCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTg                                                                                           <  2:2451849/100‑1 (MQ=255)
           atCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGc                                                                                          >  2:434182/1‑100 (MQ=255)
              aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                                                       >  2:1004782/1‑100 (MQ=255)
              aTTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCaaa                                                                                       <  1:634315/100‑1 (MQ=255)
                 aTGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACtt                                                                                    >  1:431921/1‑100 (MQ=255)
                    ggTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                 <  2:2308062/100‑1 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTaa                                                                                >  1:1566465/1‑100 (MQ=255)
                     gTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCAATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTa                                                                                 >  2:3049464/1‑99 (MQ=255)
                       tttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAat                                                                              >  2:1798892/1‑100 (MQ=255)
                        ttGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAata                                                                             <  2:1237257/100‑1 (MQ=255)
                          gACGGTACCCGTGACCGCGCGTTGTGCGAAGACAGTGCCATGTCGCATCAGCCGACCGTGCCGGATCGTCTGCGTGGGTTATTGCAAACTTTTAAATATc                                                                           <  1:2598044/100‑1 (MQ=255)
                          gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                           <  1:582055/100‑1 (MQ=255)
                          gACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                           <  2:104894/100‑1 (MQ=255)
                          gACGATACCCGTGACCGCGCGTGGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATc                                                                           <  1:897794/100‑1 (MQ=255)
                           aCGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCa                                                                          <  1:2242860/100‑1 (MQ=255)
                                 nccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                                    >  2:1640841/2‑100 (MQ=255)
                                 cccGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGaaaaa                                                                    >  2:456299/1‑100 (MQ=255)
                                   cGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAata                                                                  <  2:393925/100‑1 (MQ=255)
                                      gACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTc                                                               >  2:1425643/1‑100 (MQ=255)
                                       aCCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCg                                                              >  2:688709/1‑100 (MQ=255)
                                         cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCa                                                            >  1:1785898/1‑100 (MQ=255)
                                         cgcgcgTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCa                                                            <  1:475577/100‑1 (MQ=255)
                                              gttgttCGAAGACATTTCCATGTCGCAGCAGCTGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCa                                                        <  1:2792037/99‑1 (MQ=255)
                                              gttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCAt                                                       <  2:2894113/100‑1 (MQ=255)
                                              gttgttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCAt                                                       >  2:2710329/1‑100 (MQ=255)
                                               ttgttCGAAGACAGTGACATGTCGCAGCAGCCGACCGTGCCGGATCGTTTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATg                                                      <  1:1783130/100‑1 (MQ=255)
                                                tgttCGAAGACAGTGCCATGTCGAAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGc                                                     >  2:1115980/1‑100 (MQ=255)
                                                 gttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCt                                                    <  2:1347027/100‑1 (MQ=255)
                                                 gttCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCt                                                    >  1:724484/1‑100 (MQ=255)
                                                   tCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAGCTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                                                  >  2:1887309/1‑100 (MQ=255)
                                                    cGAAGACATTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCttt                                                  <  1:2492363/99‑1 (MQ=255)
                                                     gAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCa                                                >  2:1149557/1‑100 (MQ=255)
                                                       aagtttgcaataaccaacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                              <  2:2605298‑M2/56‑1 (MQ=255)
                                                       aGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAAc                                              <  1:1314266/100‑1 (MQ=255)
                                                        gACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACg                                             <  1:706485/100‑1 (MQ=255)
                                                        gACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACg                                             >  2:213248/1‑100 (MQ=255)
                                                         aCAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGa                                            <  2:724489/100‑1 (MQ=255)
                                                            gTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAaga                                         <  2:2665248/100‑1 (MQ=255)
                                                               ccATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTTTTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAggg                                      <  2:1022360/100‑1 (MQ=255)
                                                                 aTGTCGCAGCCGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTAAACGAAGAGGGCa                                    <  1:2620926/100‑1 (MQ=255)
                                                                   gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                                  >  1:2345326/1‑100 (MQ=255)
                                                                   gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                                  <  1:1387678/100‑1 (MQ=255)
                                                                   gTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                                  <  2:764099/100‑1 (MQ=255)
                                                                   accaacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAGAATATTCGCATTCATGCTTTCAACGAAGAGGGCATg                                  >  2:774052‑M2/33‑100 (MQ=255)
                                                                     caacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa                                >  1:2331566‑M2/31‑100 (MQ=255)
                                                                     caacgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa                                >  1:1844730‑M2/31‑100 (MQ=255)
                                                                     cGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGa                                >  1:131994/1‑100 (MQ=255)
                                                                       cagcagCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGc                              >  2:1727718/1‑100 (MQ=255)
                                                                       cagcagCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGc                              >  2:414478/1‑100 (MQ=255)
                                                                       acgcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGc                              >  2:1372449‑M2/29‑100 (MQ=255)
                                                                         gcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  1:2399416‑M2/27‑100 (MQ=255)
                                                                         gcagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  2:2530702‑M2/27‑100 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAGGAGGGCATggagacg                            <  2:3006803‑M1/100‑4 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  1:354832‑M1/1‑100 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  2:1696401‑M1/1‑100 (MQ=255)
                                                                         GCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCg                            >  2:1134770‑M1/1‑100 (MQ=255)
                                                                          cagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGt                           >  1:1684188‑M2/26‑100 (MQ=255)
                                                                          cagacgatccggcacggtcggctgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGt                           >  2:2507565‑M2/26‑100 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                          <  1:1965522‑M1/100‑1 (MQ=255)
                                                                           AGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTa                          >  2:2551104‑M1/1‑100 (MQ=255)
                                                                             ccGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATc                        >  2:1317830/1‑100 (MQ=255)
                                                                              cGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATcc                       <  1:2710313/100‑1 (MQ=255)
                                                                               gACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCg                      <  1:1233854/100‑1 (MQ=255)
                                                                                aCCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGc                     <  2:2953747/100‑1 (MQ=255)
                                                                                   gTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGc                     >  1:1435575/1‑97 (MQ=255)
                                                                                   gTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATAGCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACg                  >  2:3036565/1‑100 (MQ=255)
                                                                                     gCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGc                <  2:2978691/100‑1 (MQ=255)
                                                                                      ccGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCt               <  1:574290/100‑1 (MQ=255)
                                                                                      ccGGATCGTCTGCGTTGGTTATTGCAAACTATTGAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCt               >  1:2008771/1‑100 (MQ=255)
                                                                                          aTCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGa           <  2:2927430/100‑1 (MQ=255)
                                                                                             gactgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgt        >  2:2073279‑M2/7‑100 (MQ=255)
                                                                                             gTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgt        >  2:185446/1‑100 (MQ=255)
                                                                                              tCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtg       >  2:467832/1‑100 (MQ=255)
                                                                                                tgcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGAtgtgtg     <  1:1004777‑M2/97‑1 (MQ=255)
                                                                                                 gcGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTgg    <  1:2706530‑M2/98‑1 (MQ=255)
                                                                                                  cGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGa   <  2:588454‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACGAGCTGCATATCATTATGGGTTTTGACGATACCCGTGACCGCGCGTTGTTCGAAGACAGTGCCATGTCGCAGCAGCCGACCGTGCCGGATCGTCTGCGTTGGTTATTGCAAACTTTTAAATATCAGAAAAATATTCGCATTCATGCTTTCAACGAAGAGGGCATGGAGCCGTATCCGCACGGCTGGGATGTGTGGAG  >  NC_000913/4627589‑4627787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.