New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1068354 =NA (NA)4 (0.040) 3/164 NT NA noncoding (1/98 nt) RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP92 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2684142 = NA (NA)noncoding (26/98 nt) RIP186 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP186 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 147 total aligned reads displayed.

TACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACAGCA  >  NC_000913/2684043‑2684239
                                                                                                   |                                                                                                 
tACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGcc                                                                                                   <  2:2034580/100‑1 (MQ=255)
tACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGcc                                                                                                   >  2:784026/1‑100 (MQ=255)
tACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGcc                                                                                                   <  2:328950/100‑1 (MQ=255)
tACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGcc                                                                                                   <  2:1129455/100‑1 (MQ=255)
 aCGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGTCTGATGCGCTACGCTTATCAGGCCt                                                                                                  >  2:2334948/1‑100 (MQ=255)
 aCGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                                  <  2:1123230/100‑1 (MQ=255)
 aCGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                                  >  1:2610056/1‑100 (MQ=255)
  cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 >  1:1091544/1‑100 (MQ=255)
  cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 >  2:2187000/1‑100 (MQ=255)
  cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 <  1:1846132/100‑1 (MQ=255)
  cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 <  1:1819003/100‑1 (MQ=255)
  cGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 <  2:136417/100‑1 (MQ=255)
   gACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTa                                                                                                 >  1:349765/1‑99 (MQ=255)
     cAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTacac                                                                                              <  2:2950227/100‑1 (MQ=255)
        aTTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGga                                                                                           >  1:229111/1‑100 (MQ=255)
          ttGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGgaga                                                                                         <  2:1996561/100‑1 (MQ=255)
            gATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGAtt                                                                                       <  1:904626/100‑1 (MQ=255)
              tGGCGCGCTAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGc                                                                                     >  2:1601429/1‑100 (MQ=255)
              tGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGc                                                                                     <  2:2322103/100‑1 (MQ=255)
                 cgcgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAat                                                                                  <  2:1671404/100‑1 (MQ=255)
                 cgcgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAat                                                                                  <  1:584751/100‑1 (MQ=255)
                 cgcgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAat                                                                                  >  2:2004366/1‑100 (MQ=255)
                 cgcgATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAat                                                                                  <  1:1462057/100‑1 (MQ=255)
                   ctaTAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAat                                                                                  <  1:1730828/96‑1 (MQ=255)
                    gATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAatata                                                                               <  1:2299831/100‑1 (MQ=255)
                        aCGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAACAATTTCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGa                                                                           >  2:258426/1‑100 (MQ=255)
                           tAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAAtt                                                                        >  2:910001/1‑100 (MQ=255)
                           tAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAAtt                                                                        <  2:58027/100‑1 (MQ=255)
                             gAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTg                                                                      <  2:2047298/100‑1 (MQ=255)
                             gAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTg                                                                      <  2:1685498/100‑1 (MQ=255)
                             gAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTg                                                                      <  2:1426136/100‑1 (MQ=255)
                             gAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTg                                                                      >  1:281691/1‑100 (MQ=255)
                              aaaGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGc                                                                     >  1:2652972/1‑100 (MQ=255)
                                 ggCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCaaa                                                                  >  2:214789/1‑100 (MQ=255)
                                   cTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGt                                                                >  1:1964740/1‑100 (MQ=255)
                                     tCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGttt                                                              >  1:223066/1‑100 (MQ=255)
                                       ccGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTg                                                            <  2:1707825/100‑1 (MQ=255)
                                        cGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACTCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGt                                                           <  1:3047205/100‑1 (MQ=255)
                                        cGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGt                                                           <  1:2719585/100‑1 (MQ=255)
                                        cGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGt                                                           <  2:2549952/100‑1 (MQ=255)
                                        cGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGt                                                           >  1:121386/1‑100 (MQ=255)
                                         gatggaagCCTTGATGATCATAAACGAAAAATTGCCTTATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTa                                                          <  1:1097064/97‑1 (MQ=255)
                                         gaaggaagCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTa                                                          <  1:2565418/100‑1 (MQ=255)
                                         gaaggaagCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTa                                                          <  2:2573255/100‑1 (MQ=255)
                                           aggaagCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAgg                                                        >  2:406633/1‑100 (MQ=255)
                                           aggaagCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAgg                                                        >  2:2749485/1‑100 (MQ=255)
                                             gaagCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGcc                                                      <  2:831132/100‑1 (MQ=255)
                                               agCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCgg                                                    <  2:1951972/100‑1 (MQ=255)
                                               agCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCgg                                                    <  2:1952160/100‑1 (MQ=255)
                                               agCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCAACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCgn                                                    <  1:1442138/100‑2 (MQ=255)
                                                 ccTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGAt                                                  >  2:1550263/1‑100 (MQ=255)
                                                   ttGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATaa                                                <  2:1849716/100‑1 (MQ=255)
                                                   ttGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATa                                                 <  2:2526161/99‑1 (MQ=255)
                                                    tgatgaTCATAAACGAAAAATTGCCTGATGCGCTACTCTTATCAGGCCTACACGGATATTGCAATATATTTAATTTGCAAAGTTTTGTAGGCCGGATAAg                                               <  1:1394015/100‑1 (MQ=255)
                                                    tgatgaTCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAg                                               <  2:112513/100‑1 (MQ=255)
                                                    tgatgaTCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAg                                               >  1:2397585/1‑100 (MQ=255)
                                                     gatgatCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAgg                                              <  1:1929734/100‑1 (MQ=255)
                                                     gatgatCATAAACAAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAgg                                              <  2:1777854/100‑1 (MQ=255)
                                                      atgatCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGc                                             <  1:2886964/100‑1 (MQ=255)
                                                       tgatCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGAGTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCg                                            >  1:902987/1‑100 (MQ=255)
                                                        gatCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGt                                           >  1:1720921/1‑100 (MQ=255)
                                                         ttgcaatcttctggtaggcctgataagcatcgcgcatcaggcCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGtt                                          >  2:875140‑M2/43‑100 (MQ=255)
                                                          tCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTc                                         >  1:2313805/1‑100 (MQ=255)
                                                          tCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTc                                         <  2:383192/100‑1 (MQ=255)
                                                          tCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTc                                         >  1:1820220/1‑100 (MQ=255)
                                                           cATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCa                                        >  1:44397/1‑100 (MQ=255)
                                                           cATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCa                                        >  1:1897530/1‑100 (MQ=255)
                                                              aaaCGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCAcgc                                     <  1:3055396/100‑1 (MQ=255)
                                                              aaaCGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTAAcgc                                     >  2:2122548/1‑100 (MQ=255)
                                                               aaCGAAAAATTGCCTGATGCGCTACGCTTATCAGGCTTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCAcgcc                                    <  2:1054367/100‑1 (MQ=255)
                                                               aaCGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCAcgcc                                    <  2:1875100/100‑1 (MQ=255)
                                                                aCGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCAcgccg                                   <  2:2538367/100‑1 (MQ=255)
                                                                 cGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCAcgccgc                                  >  1:2152206/1‑100 (MQ=255)
                                                                  gAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCa                                 <  1:2370055/100‑1 (MQ=255)
                                                                     aaaTTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc                              <  1:94709/100‑1 (MQ=255)
                                                                        ttGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                           <  1:1260929/100‑1 (MQ=255)
                                                                         ggcctgataagcgtagcgcatcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCa                          >  2:1486442‑M2/27‑100 (MQ=255)
                                                                         ggcctgataagcatcgcgcatcaggcCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                          >  2:406001‑M2/27‑100 (MQ=255)
                                                                          gcctgataagcgtagcgcatcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAt                         >  1:1925953‑M2/26‑100 (MQ=255)
                                                                           ccTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                        <  1:1882781/100‑1 (MQ=255)
                                                                           ccTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg                        <  2:2230439/100‑1 (MQ=255)
                                                                            cTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGAGTTCACGCCGCATCCGGCATGa                       <  2:1794267/100‑1 (MQ=255)
                                                                                 gcgcTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGaacaac                  <  2:2810075/100‑1 (MQ=255)
                                                                                  cgcTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACg                 <  2:1350403/100‑1 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGa                >  1:1200012/1‑100 (MQ=255)
                                                                                     tACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGc              <  2:1891046/100‑1 (MQ=255)
                                                                                        gcgcatcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGcaca           <  2:3042352‑M2/89‑1 (MQ=255)
                                                                                        gCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGcaca           <  2:606286/100‑1 (MQ=255)
                                                                                         cTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACAt          >  1:1121828/1‑100 (MQ=255)
                                                                                          ttATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACAtt         <  1:473420/100‑1 (MQ=255)
                                                                                           tATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTg        >  1:2048650/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTg        <  1:341982/100‑1 (MQ=255)
                                                                                             tcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGAc      >  2:1661461‑M2/7‑100 (MQ=255)
                                                                                             tcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGAc      >  1:1242578‑M2/7‑100 (MQ=255)
                                                                                             tcaggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGAc      <  1:760146‑M2/94‑1 (MQ=255)
                                                                                              caggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACa     >  2:1570530‑M2/6‑100 (MQ=255)
                                                                                              caggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACa     >  2:1381900‑M2/6‑100 (MQ=255)
                                                                                               aggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACAg    >  1:1370079‑M2/5‑100 (MQ=255)
                                                                                               aggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACAg    <  1:214787‑M2/96‑1 (MQ=255)
                                                                                               aggcCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACAg    >  1:2709797‑M2/5‑100 (MQ=255)
                                                                                                   |                                                                                                 
TACGACAGATTTGATGGCGCGATAACGTAGAAAGGCTTCCCGAAGGAAGCCTTGATGATCATAAACGAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACACGGAGATTGCAATATATTGAATTTGCAAAGTTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGAGCACATTGACAGCA  >  NC_000913/2684043‑2684239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.