Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,525,969 T→A 81.8% I61F (ATC→TTC)  nudE ← adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,525,9690TA81.8% 310.6 / 57.7 121I61F (ATC→TTC) nudEadenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase
Reads supporting (aligned to +/- strand):  ref base T (9/13);  new base A (50/49);  total (59/62)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 134 total aligned reads displayed.

TTAGCGGCTTCGTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAACTCCA  >  NC_000913/3525872‑3526064
                                                                                                 |                                                                                               
ttAGCGGCTTCGTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCggatcaggaaca                                                                                               <  2:1389515/100‑1 (MQ=255)
         tCGTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGt                                                                                      >  2:611796/1‑100 (MQ=255)
          cGTAGACGCTTTCACCCGGATCAATTAATCCTTTCGCAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTc                                                                                     >  1:476444/1‑100 (MQ=255)
          cGTAGACGCTTTCACCCGGATCAATTAATACTATCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTc                                                                                     <  1:2307913/100‑1 (MQ=255)
           gTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTcc                                                                                    <  1:2950156/100‑1 (MQ=255)
           gTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTcc                                                                                    <  2:2340054/100‑1 (MQ=255)
           gTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTcc                                                                                    <  2:1216926/100‑1 (MQ=255)
            tAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCca                                                                                   <  2:1453291/100‑1 (MQ=255)
             aGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCcac                                                                                  <  2:1109650/100‑1 (MQ=255)
                  gtttCACCCGGACCAATTAATCCTTTCCAAAAACCTAATTCTGAGGAGTCAGTTCCCACTGCGTATGCGCGGATCAGGAACAGGTGATCGTCCACAATCg                                                                             <  1:2995648/99‑1 (MQ=255)
                  cTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCCCAATc                                                                              >  1:2897150/1‑99 (MQ=255)
                  cTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCg                                                                             >  2:1001974/1‑100 (MQ=255)
                  cTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCg                                                                             >  1:91174/1‑100 (MQ=255)
                  cTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCg                                                                             >  2:681259/1‑100 (MQ=255)
                   tttCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCgg                                                                            >  1:2209577/1‑100 (MQ=255)
                      cACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGcac                                                                         >  2:507354/1‑100 (MQ=255)
                      cACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTACGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGcac                                                                         >  1:1960712/1‑100 (MQ=255)
                       aCCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGcaca                                                                        <  2:226199/100‑1 (MQ=255)
                       aCCCGGATCAATTAATCCTTTCGAAAAACCAAAGTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCAAAATCGGcaca                                                                        >  1:2008153/1‑100 (MQ=255)
                        cccGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACaa                                                                       >  2:1509733/1‑100 (MQ=255)
                        cccGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACaa                                                                       >  2:464348/1‑100 (MQ=255)
                        cccGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACaa                                                                       >  2:907198/1‑100 (MQ=255)
                          cGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAatc                                                                     <  1:1283299/100‑1 (MQ=255)
                           ggATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAatca                                                                    <  2:2025519/100‑1 (MQ=255)
                              tCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAAtcatca                                                                 <  2:2141051/100‑1 (MQ=255)
                              tCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAAtcatca                                                                 >  2:196147/1‑100 (MQ=255)
                               cAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCAc                                                                >  1:1064309/1‑100 (MQ=255)
                               cAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCAc                                                                <  2:2209590/100‑1 (MQ=255)
                               cAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCAc                                                                <  1:1208083/100‑1 (MQ=255)
                               cAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCAc                                                                <  2:1498386/100‑1 (MQ=255)
                                 aTTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTg                                                              >  2:331362/1‑100 (MQ=255)
                                 aTTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTg                                                              >  2:2622980/1‑100 (MQ=255)
                                      tCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTcc                                                         >  2:2691186/1‑100 (MQ=255)
                                       ccTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTccc                                                        >  2:1954216/1‑100 (MQ=255)
                                       ccTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTccn                                                        <  1:652599/100‑2 (MQ=255)
                                       ccTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTccc                                                        >  1:474239/1‑100 (MQ=255)
                                        cTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCg                                                       <  2:1714518/100‑1 (MQ=255)
                                           tCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggtt                                                    <  2:2966802/100‑1 (MQ=255)
                                            cGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttg                                                   <  1:894969/100‑1 (MQ=255)
                                            cGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttg                                                   >  1:1454007/1‑100 (MQ=255)
                                            cGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttg                                                   >  1:2760504/1‑100 (MQ=255)
                                            cGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttg                                                   <  1:2815467/100‑1 (MQ=255)
                                            cGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttg                                                   >  1:1920311/1‑100 (MQ=255)
                                             gAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttgg                                                  >  2:2893561/1‑100 (MQ=255)
                                             gAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttgg                                                  >  2:660629/1‑100 (MQ=255)
                                             gAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGAGCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttgg                                                  >  1:1696930/1‑100 (MQ=255)
                                              aaaaaCCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttggt                                                 <  2:2982800/100‑1 (MQ=255)
                                               aaaaCCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCggttggtt                                                <  2:1995451/100‑1 (MQ=255)
                                                aaaCCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGgttggttg                                               <  2:2512671/100‑1 (MQ=255)
                                                 aaCCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGttggttgg                                              <  2:1609586/100‑1 (MQ=255)
                                                   ccTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGAc                                            >  1:1674640/1‑100 (MQ=255)
                                                    cTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACg                                           <  1:913680/100‑1 (MQ=255)
                                                     tAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGc                                          >  1:1707764/1‑100 (MQ=255)
                                                      aaTTCGTGGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCa                                         <  1:525466/100‑1 (MQ=255)
                                                        ttCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCAtt                                       >  2:1397454/1‑100 (MQ=255)
                                                          cGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCg                                     >  1:922206/1‑100 (MQ=255)
                                                           gTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCg                                     >  2:2474583/1‑99 (MQ=255)
                                                            tAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGtt                                   <  1:2294866/100‑1 (MQ=255)
                                                              ggATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCACTCGTTCa                                 <  2:1602613/100‑1 (MQ=255)
                                                              ggATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCa                                 <  1:265030/100‑1 (MQ=255)
                                                              ggATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCa                                 <  1:225825/100‑1 (MQ=255)
                                                              ggATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCa                                 >  1:887781/1‑100 (MQ=255)
                                                              ggATTCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCa                                 >  2:1237236/1‑100 (MQ=255)
                                                                aTTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATa                               >  1:1034197/1‑100 (MQ=255)
                                                                aTTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATa                               <  1:1298736/100‑1 (MQ=255)
                                                                 ttCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATaa                              <  2:2616751/100‑1 (MQ=255)
                                                                 ttCAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATaa                              <  2:2570687/100‑1 (MQ=255)
                                                                 ttCAGTTCCCACTGCGTATGCGCTGAGCAGTAACAGGTGATCGGCCACAATGGCCACAATCATCACTGCTTCCCGATTGGTTGGACGCATGCGTTCATa                               <  1:1333836/99‑1 (MQ=255)
                                                                   cAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAac                            <  2:1110431/100‑1 (MQ=255)
                                                                   cAGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAac                            >  2:265284/1‑100 (MQ=255)
                                                                    aGTTCCCACTGCGTATTCGCGTATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATa                               <  1:2601884/96‑1 (MQ=255)
                                                                    aGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAaca                           >  2:2052735/1‑100 (MQ=255)
                                                                    aGTTCCCACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAaca                           >  1:2597478/1‑100 (MQ=255)
                                                                        cccACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACAcgc                        <  2:3004931/99‑1 (MQ=255)
                                                                        cccACTGCGTATTCGAGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTACCGGGTGGGTCGACGCATTCGTGCATAAACAcgcc                       >  1:3063003/1‑100 (MQ=255)
                                                                         ccACTGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACAcgccg                      >  2:1342041/1‑100 (MQ=255)
                                                                             tGCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACg                  >  1:2966454/1‑100 (MQ=255)
                                                                              gCGTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGc                 >  1:1552906/1‑100 (MQ=255)
                                                                                gTATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCa               >  1:2883276/1‑100 (MQ=255)
                                                                                 tATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCAt              <  1:1982010/100‑1 (MQ=255)
                                                                                 tATTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCAt              <  1:983757/100‑1 (MQ=255)
                                                                                  aTTCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCAtt             >  2:2079314/1‑100 (MQ=255)
                                                                                    tCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGc           <  1:323238/100‑1 (MQ=255)
                                                                                    tCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGc           <  1:2248090/100‑1 (MQ=255)
                                                                                    tCGCGGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGc           <  1:2847272/100‑1 (MQ=255)
                                                                                     cgcgGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCt          >  2:592722/1‑100 (MQ=255)
                                                                                     cgcgGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCt          <  2:1724540/100‑1 (MQ=255)
                                                                                     cgcgGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCt          <  2:1264669/100‑1 (MQ=255)
                                                                                     cgcgGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCt          <  2:2172422/100‑1 (MQ=255)
                                                                                     cgcgGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACGGCGTCCCGGATGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCt          >  1:252568/1‑100 (MQ=255)
                                                                                      gcgGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTg         <  1:396023/100‑1 (MQ=255)
                                                                                      gcgGATCAGGAACAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTg         >  2:1543114/1‑100 (MQ=255)
                                                                                       cgGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGa        <  2:870452/100‑1 (MQ=255)
                                                                                       cgGATCAGGAACAGGTGATCGTACAAAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGa        <  2:467689/100‑1 (MQ=255)
                                                                                         gatcaggaacagGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAAc      <  2:10129/100‑1 (MQ=255)
                                                                                         gatcaggaacagGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAAc      >  1:2743826/1‑100 (MQ=255)
                                                                                         gatcaggaacagGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAAc      >  2:1784938/1‑100 (MQ=255)
                                                                                          atcaggaacaggTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAACt     <  2:2356418/100‑1 (MQ=255)
                                                                                             aggatcaggTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAACTCCa  >  2:2794777/1‑100 (MQ=255)
                                                                                             aggaacaggTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAACTCCa  <  2:551887/100‑1 (MQ=255)
                                                                                                 |                                                                                               
TTAGCGGCTTCGTAGACGCTTTCACCCGGATCAATTAATCCTTTCGAAAAACCTAATTCGTAGGATTCAGTTCCCACTGCGTATTCGCGGATCAGGATCAGGTGATCGTCCACAATCGGCACAATCATCACTGCTTCCCGGTTGGTTGGACGCATTCGTTCATAAACACGCCGCACGCCATTGCTGAACTCCA  >  NC_000913/3525872‑3526064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: