| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,397,557 | G→T | 100% | G49V (GGT→GTT) | mutL → | methyl‑directed mismatch repair protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,397,557 | 0 | G | T | 99.3% | 460.5 / ‑4.5 | 134 | G49V (GGT→GTT) | mutL | methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base T (62/70); minor base C (0/1); total (62/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.48e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCG > NC_000913/4397460‑4397652 | ggtgaggtgGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTg < 1:3010698/100‑1 (MQ=255) gtgaggtgGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTgg < 1:2941928/100‑1 (MQ=255) gaggtgGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTgggg < 2:2486650/100‑1 (MQ=255) aggtgGTCGAGCGACCTGCGTCGGTAGGCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGc < 1:1482277/100‑1 (MQ=255) ggtggtCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCg > 1:464780/1‑100 (MQ=255) ggtggtCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCg > 2:2964715/1‑100 (MQ=255) gtggtCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGa > 1:2488252/1‑100 (MQ=255) tggtCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGaa < 2:2540620/100‑1 (MQ=255) gtCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAAc < 2:193112/100‑1 (MQ=255) cGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACtt > 1:127646/1‑100 (MQ=255) gAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTa < 1:2821716/100‑1 (MQ=255) aGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTAt > 1:644259/1‑100 (MQ=255) aGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTAt > 2:980555/1‑100 (MQ=255) gCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATc > 2:2382558/1‑100 (MQ=255) gCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATc > 2:1398358/1‑100 (MQ=255) cGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATcc < 1:1133534/100‑1 (MQ=255) gACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCg < 1:1332006/100‑1 (MQ=255) tCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTg < 2:205611/100‑1 (MQ=255) tCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTg < 2:2824373/100‑1 (MQ=255) ggTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGAt > 1:19275/1‑100 (MQ=255) ggTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGAt < 1:1631105/100‑1 (MQ=255) aGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAAc < 1:982577/100‑1 (MQ=255) aGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAAc < 1:2720085/100‑1 (MQ=255) gTCAAAGGAGTAGTGAAAAACATCCTCGATGCAGGTGCGACGCATATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACg < 1:556556/100‑1 (MQ=255) gTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACg > 1:1122267/1‑100 (MQ=255) tCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACgg > 2:1875703/1‑100 (MQ=255) cAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGc < 2:2794784/100‑1 (MQ=255) cAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGc > 2:2113071/1‑100 (MQ=255) cAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGc > 1:615015/1‑100 (MQ=255) aaaGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCt > 2:674321/1‑100 (MQ=255) gAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCg < 1:1007478/100‑1 (MQ=255) gAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCg < 2:1227938/100‑1 (MQ=255) tAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTAt < 2:1414315/100‑1 (MQ=255) tAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTAt < 1:2261471/100‑1 (MQ=255) aGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATc > 2:2319126/1‑100 (MQ=255) gTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCa < 1:275247/100‑1 (MQ=255) gTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCa > 1:277683/1‑100 (MQ=255) gTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCa > 1:2449718/1‑100 (MQ=255) gTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCa > 1:665108/1‑100 (MQ=255) gTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCa > 1:556566/1‑100 (MQ=255) tGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCaa > 1:151739/1‑100 (MQ=255) ggAAAACGGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCaaa > 2:164749/1‑100 (MQ=255) gatgagaGCGTCGATGCAGGTGCGACGGGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCaaa < 1:2550595/93‑1 (MQ=255) aCAGCCTCCATGCAGGTGCGACGCGTATCGATATTGATCTCG‑A‑ACGCGTTGGGGAGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGa < 2:562535/100‑1 (MQ=255) cAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGAt < 2:631433/100‑1 (MQ=255) cAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGAt < 2:1701298/100‑1 (MQ=255) cAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGAt < 1:297850/100‑1 (MQ=255) aGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATG < 1:1916173‑M1/100‑1 (MQ=255) aGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATG < 2:844029‑M1/100‑1 (MQ=255) aGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATG < 2:2544455‑M1/100‑1 (MQ=255) gCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGA > 1:1246151‑M1/1‑100 (MQ=255) gCCTCGATGCAGGGGCGACGCGTATGGATATTGATATCG‑A‑GCGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATG < 1:268789‑M1/99‑1 (MQ=255) ccTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAG > 2:283100‑M1/1‑100 (MQ=255) ccTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAG > 2:1601858‑M1/1‑100 (MQ=255) cTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGC > 2:192659‑M1/1‑100 (MQ=255) tCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGC < 1:2257696‑M1/99‑1 (MQ=255) aTGCAGGTGCGACCCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggc < 1:2880666/100‑1 (MQ=255) tGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcg > 1:331503/1‑100 (MQ=255) ggTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCACAAAAGATGAgctggcgctgg > 2:1782001/1‑100 (MQ=255) ggTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcgctgg > 1:716640/1‑100 (MQ=255) gTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcgctggc < 2:1387124/100‑1 (MQ=255) gTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcgctggc < 2:2136253/100‑1 (MQ=255) ccccaaCGCGT‑TCGATATCAATATCG‑ATACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcgctggc > 2:625156/6‑100 (MQ=25) tGCGACGCGTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAgctggcgctggcg > 2:797571/1‑100 (MQ=255) cgcgTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGgc < 1:2227064‑M2/100‑3 (MQ=255) cgcgT‑TCGATATCAATATCG‑ATACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGgc < 1:812250‑M2/100‑3 (MQ=255) cgTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGgctc > 1:2568179‑M2/1‑96 (MQ=255) gTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCg < 2:2042026/100‑1 (MQ=255) gTATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCg < 1:283098/100‑1 (MQ=255) tATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGt < 2:2255636/100‑1 (MQ=255) tATCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGt < 2:918775/100‑1 (MQ=255) tCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatct < 2:1809721‑M1/100‑23 (MQ=255) tCGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCa < 2:1727999/100‑1 (MQ=255) cGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTcct < 2:2060215/100‑3 (MQ=255) cGATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCAt < 2:2923806/100‑1 (MQ=255) gATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATg > 2:1094055/1‑100 (MQ=255) gATATTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCAGAAGAATAAAAAAAGATGAGCcagcgccagcgccagctcatct < 1:1817335‑M1/98‑23 (MQ=255) gATATTGATATCG‑A‑ACGCGCTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatcttt < 1:2674195‑M1/100‑25 (MQ=255) tatcaatatCGAA‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGc > 1:2295506/6‑100 (MQ=255) tatTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatcttttt < 1:1398352‑M1/100‑27 (MQ=255) tatTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGcc < 2:728325/100‑1 (MQ=255) tatTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGcc < 1:2178667/100‑1 (MQ=255) tatTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGcc < 2:1246157/100‑1 (MQ=255) atTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGcca > 1:969168/1‑100 (MQ=255) atTGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTCATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatctttttt < 1:2152759‑M1/100‑28 (MQ=255) atTGATATCG‑A‑ACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatctttttt < 2:2987154‑M1/100‑28 (MQ=255) ttGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCcagcgccagcgccagctcatcttttttg < 2:3030665‑M1/100‑29 (MQ=255) tGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGccacc < 2:1644013/100‑1 (MQ=255) tGATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGccacc > 2:375765/1‑100 (MQ=255) gATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGccacca > 1:2948918/1‑100 (MQ=255) gATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGccacca > 2:3016751/1‑100 (MQ=255) gATATCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGAAGAGCTGGCGCTGGCGCTGGCTCGTCATGccacca > 1:1613823/1‑100 (MQ=255) atatCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAg < 2:1725890/100‑1 (MQ=255) atatCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAg > 2:217693/1‑100 (MQ=255) tatCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGt > 2:1776388/1‑100 (MQ=255) atCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTa > 1:121834/1‑100 (MQ=255) tCG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTaa > 1:2418335/1‑100 (MQ=255) cG‑A‑ACGCGTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTa < 1:650479/98‑1 (MQ=255) cgcgTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATc > 2:49889/1‑99 (MQ=255) cgcgTTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCg < 2:331505/100‑1 (MQ=255) | GGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCG‑A‑ACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCG > NC_000913/4397460‑4397652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |