Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,121,887 (GC)5→4 coding (400‑401/531 nt) hslV ← peptidase component of the HslUV protease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,121,8790G.100.0% 417.3 / NA 89coding (409/531 nt)hslVpeptidase component of the HslUV protease
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (48/41);  total (48/41)
*NC_0009134,121,8800C.100.0% 417.3 / NA 89coding (408/531 nt)hslVpeptidase component of the HslUV protease
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (48/41);  total (48/41)

Only 100 of 103 total aligned reads displayed.

CGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGA  >  NC_000913/4121780‑4121971
                                                                                                   ||                                                                                           
cGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAg                                                                                              <  2:1481351/100‑1 (MQ=255)
cGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAg                                                                                              >  1:1749506/1‑100 (MQ=255)
 gATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgc                                                                                             <  1:1906763/100‑1 (MQ=255)
    ggTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcg                                                                                          >  1:243192/1‑100 (MQ=255)
    ggTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcg                                                                                          <  1:145616/100‑1 (MQ=255)
     gtgtGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgc                                                                                         <  2:1087406/100‑1 (MQ=255)
      tgtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcg                                                                                        >  1:352633/1‑100 (MQ=255)
      tgtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcg                                                                                        >  2:1197106/1‑100 (MQ=255)
       gtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc                                                                                       >  1:2214292/1‑100 (MQ=255)
         ggAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccg                                                                                     <  2:1909709/100‑3 (MQ=255)
           aaaTGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgca                                                                                   >  2:260879/1‑96 (MQ=255)
             aTGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcagc                                                                                 >  1:1939438/1‑94 (MQ=255)
              tggttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcagcc                                                                                <  2:420706/100‑8 (MQ=255)
              tggttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcagcc                                                                                <  1:1623756/100‑8 (MQ=255)
                gttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTg                                                                            >  2:967299/1‑100 (MQ=255)
                 ttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTgg                                                                           <  2:1144119/100‑1 (MQ=255)
                  tggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTggg                                                                          <  2:1178801/100‑1 (MQ=255)
                   ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGc                                                                         >  1:1375128/1‑100 (MQ=255)
                    gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCg                                                                        <  1:599238/100‑1 (MQ=255)
                     tataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGt                                                                       >  1:2762184/1‑100 (MQ=255)
                       taGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTaa                                                                     >  1:1233058/1‑100 (MQ=255)
                       taGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTaa                                                                     >  1:2366662/1‑100 (MQ=255)
                       taGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTaa                                                                     >  1:1458381/1‑100 (MQ=255)
                        aGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAg                                                                    <  1:1193567/100‑1 (MQ=255)
                         gATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAgg                                                                   >  1:1041276/1‑100 (MQ=255)
                         gATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAgg                                                                   >  2:1282082/1‑100 (MQ=255)
                          aTGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGTCGCAGCCTGGGCGTAAggg                                                                  >  1:1834690/1‑100 (MQ=255)
                           tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgc                                                                 >  2:2410598/1‑100 (MQ=255)
                            gCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgcc                                                                >  1:1873977/1‑100 (MQ=255)
                             cAAATGTCGCATGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGAgccg                                                               >  2:1131259/1‑100 (MQ=255)
                               aaTGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgccgcc                                                             >  1:2719422/1‑100 (MQ=255)
                                  gTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGa                                                          <  1:2346307/100‑1 (MQ=255)
                                   tCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAg                                                         <  1:1354767/100‑1 (MQ=255)
                                    cGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc                                                        <  2:347612/100‑1 (MQ=255)
                                    cGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc                                                        >  2:582778/1‑100 (MQ=255)
                                     gCCTGCAATATCCAGCGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc                                                       <  1:427560/100‑1 (MQ=255)
                                     gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc                                                       >  2:2381830/1‑100 (MQ=255)
                                     gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc                                                       <  1:231191/100‑1 (MQ=255)
                                     gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc                                                       <  1:1875350/100‑1 (MQ=255)
                                     gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc                                                       >  1:436093/1‑100 (MQ=255)
                                      ccTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCg                                                      <  2:2960242/100‑1 (MQ=255)
                                       cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa                                                     >  2:2408704/1‑100 (MQ=255)
                                       cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa                                                     >  2:2630956/1‑100 (MQ=255)
                                       cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa                                                     >  1:1026260/1‑100 (MQ=255)
                                       cTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGa                                                     <  1:582781/100‑1 (MQ=255)
                                        tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt                                                    <  1:2630213/100‑1 (MQ=255)
                                         gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATa                                                   <  2:1290656/100‑1 (MQ=255)
                                         gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATa                                                   <  1:2520819/100‑1 (MQ=255)
                                         gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCATGGGCGTAAGGGCCGCCGGAGCCGATa                                                   >  1:2563802/1‑100 (MQ=255)
                                          cAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAg                                                  >  2:454813/1‑100 (MQ=255)
                                           aaTATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGc                                                 >  1:2792664/1‑100 (MQ=255)
                                              atCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAAt                                              <  2:439868/100‑1 (MQ=255)
                                               tCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa                                             >  1:321170/1‑100 (MQ=255)
                                                ncAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATaa                                            >  2:27450/2‑100 (MQ=255)
                                                ccAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATaa                                            >  1:2949389/1‑100 (MQ=255)
                                                ccAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa                                             >  2:2427760/1‑99 (MQ=255)
                                                 cAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAg                                           <  2:2902196/100‑1 (MQ=255)
                                                  aaCGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGa                                          >  1:558082/1‑100 (MQ=255)
                                                    cGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATc                                        <  1:1215551/100‑1 (MQ=255)
                                                       cTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtt                                     >  1:1095310/1‑100 (MQ=255)
                                                         tttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtttt                                   >  1:212023/1‑100 (MQ=255)
                                                          ttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTc                                  <  1:1190227/100‑1 (MQ=255)
                                                          ttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTc                                  >  2:2164062/1‑100 (MQ=255)
                                                            cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg                                <  1:95085/100‑1 (MQ=255)
                                                             aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTgg                               <  2:2364988/100‑1 (MQ=255)
                                                             aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTgg                               >  2:1467424/1‑100 (MQ=255)
                                                             aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTgg                               <  2:1530164/100‑1 (MQ=255)
                                                             aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTgg                               >  2:1087729/1‑100 (MQ=255)
                                                              gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                              >  1:2934863/1‑100 (MQ=255)
                                                              gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                              >  1:596336/1‑100 (MQ=255)
                                                              gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                              >  2:390355/1‑100 (MQ=255)
                                                              gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                              <  2:671815/100‑1 (MQ=255)
                                                              gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCACCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                              <  2:1719806/100‑1 (MQ=255)
                                                               cAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCt                             <  2:2884238/100‑1 (MQ=255)
                                                               cAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCt                             <  2:78721/100‑1 (MQ=255)
                                                                aaTTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTg                            <  2:1796951/100‑1 (MQ=255)
                                                                  tttCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGca                          <  2:1818895/100‑1 (MQ=255)
                                                                    tCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacc                        >  2:2908279/1‑100 (MQ=255)
                                                                      aCGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcaccac                      <  1:378266/100‑1 (MQ=255)
                                                                       cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg                     >  1:1230670/1‑100 (MQ=255)
                                                                       cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg                     <  1:1020605/100‑1 (MQ=255)
                                                                       cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg                     >  2:1463594/1‑100 (MQ=255)
                                                                        gggCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGt                    <  1:1282088/100‑1 (MQ=255)
                                                                            gcTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAcc                >  1:2390857/1‑100 (MQ=255)
                                                                             cTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCg               >  1:188134/1‑100 (MQ=255)
                                                                             cTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCg               <  1:2410613/100‑1 (MQ=255)
                                                                                aGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTa            <  2:2231966/100‑1 (MQ=255)
                                                                                 gTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAc           >  1:423786/1‑100 (MQ=255)
                                                                                 gTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAc           >  2:745736/1‑100 (MQ=255)
                                                                                   tCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCg         <  1:2408719/100‑1 (MQ=255)
                                                                                   tCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCg         >  1:65191/1‑100 (MQ=255)
                                                                                    cgatcttttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCgg        <  2:1411704/95‑1 (MQ=255)
                                                                                      gtgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtg      >  2:2078919/1‑100 (MQ=255)
                                                                                      gtgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGt       <  2:1213040/99‑1 (MQ=255)
                                                                                         ttttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg   >  2:1314782/1‑100 (MQ=255)
                                                                                          tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga  <  2:1857102/100‑1 (MQ=255)
                                                                                          tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga  >  2:2178984/1‑100 (MQ=255)
                                                                                          tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga  <  1:812745/100‑1 (MQ=255)
                                                                                          tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga  <  2:2272801/100‑1 (MQ=255)
                                                                                          tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGagatcg  >  1:1411712/1‑98 (MQ=255)
                                                                                                   ||                                                                                           
CGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGA  >  NC_000913/4121780‑4121971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑