Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 632,017 (G)7→6 intergenic (+18/‑165) cstA → / → ybdD carbon starvation protein involved in peptide utilization; APC peptide transporter family protein/DUF466 family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913632,0110G.97.9% 427.2 / 2.1 94intergenic (+12/‑171)cstA/ybdDcarbon starvation protein involved in peptide utilization; APC peptide transporter family protein/DUF466 family protein
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base . (37/55);  total (39/55)
Fisher's exact test for biased strand distribution p-value = 1.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01

Only 100 of 106 total aligned reads displayed.

CCGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAGGGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGTTG  >  NC_000913/631913‑632105
                                                                                                  |                                                                                              
ccGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAgg                                                                                               <  2:2584017/100‑1 (MQ=255)
 cGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggg                                                                                              >  2:38022/1‑100 (MQ=255)
 cGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggg                                                                                              >  1:2633286/1‑100 (MQ=255)
 cGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggg                                                                                              <  1:2412247/100‑1 (MQ=255)
  gAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAgggg                                                                                             >  2:1266781/1‑100 (MQ=255)
  gAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAgggg                                                                                             <  2:38368/100‑1 (MQ=255)
    aGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAgggggg                                                                                           <  2:246960/100‑1 (MQ=255)
     gCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggggggn                                                                                          <  1:1406343/100‑2 (MQ=255)
       cAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggggggatg                                                                                        >  2:797813/1‑97 (MQ=255)
       cAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggggggatg                                                                                        >  1:2754150/1‑97 (MQ=255)
       cAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggggggatg                                                                                        >  2:2656370/1‑97 (MQ=255)
        aaCGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAggcgggatg                                                                                        >  2:527336/1‑96 (MQ=255)
            gCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGc                                                                                  <  2:689518/100‑1 (MQ=255)
            gCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGc                                                                                  >  2:2661512/1‑100 (MQ=255)
            gCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGc                                                                                  >  2:2139542/1‑100 (MQ=255)
             cGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCg                                                                                 >  1:1612213/1‑100 (MQ=255)
               aaagaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGaa                                                                               <  2:1396514/100‑1 (MQ=255)
                aagaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAAt                                                                              >  2:1029121/1‑100 (MQ=255)
                aagaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAAt                                                                              >  1:1135298/1‑100 (MQ=255)
                aagaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAAt                                                                              >  2:2897574/1‑100 (MQ=255)
                 agaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATg                                                                             <  2:268829/100‑1 (MQ=255)
                  gaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGt                                                                            >  2:2427594/1‑100 (MQ=255)
                  gaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGt                                                                            <  1:2352254/100‑1 (MQ=255)
                  gaaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGt                                                                            <  1:51010/100‑1 (MQ=255)
                   aaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGCGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGtt                                                                           <  2:1651082/100‑1 (MQ=255)
                   aaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGtt                                                                           >  1:2446508/1‑100 (MQ=255)
                   aaaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGGGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGtt                                                                           <  1:2129072/100‑1 (MQ=255)
                    aaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTg                                                                          <  2:1942595/100‑1 (MQ=255)
                    aaCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTg                                                                          >  1:937375/1‑100 (MQ=255)
                     aCGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTgg                                                                         <  1:811588/100‑1 (MQ=255)
                      cGCCGTATGAACCAATGCCGGAAAATGTCTAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGc                                                                        <  2:1030187/100‑1 (MQ=255)
                      cGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAGGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGc                                                                        <  1:2365341/100‑1 (MQ=255)
                      cGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGc                                                                        >  1:515315/1‑100 (MQ=255)
                      cGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGc                                                                        <  2:1654201/100‑1 (MQ=255)
                        ccGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCtt                                                                      <  2:2455327/100‑1 (MQ=255)
                        ccGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCtt                                                                      <  1:1230436/100‑1 (MQ=255)
                          gTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAg                                                                    <  1:1904662/100‑1 (MQ=255)
                               aaCCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGccc                                                               <  1:1643895/100‑1 (MQ=255)
                                     tGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGtt                                                         >  1:2258509/1‑100 (MQ=255)
                                     tGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGtt                                                         >  2:258785/1‑100 (MQ=255)
                                      gCCGGAAAATGTCGAGGAGATCGTGGCGGAGGCAAAAGGCGCACACTAAAGTCAGAGGGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAg                                                             <  2:2755041/95‑1 (MQ=255)
                                      gCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAACGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTc                                                        <  2:879054/100‑1 (MQ=255)
                                       ccGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTcc                                                       >  1:29895/1‑100 (MQ=255)
                                        cGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTccc                                                      <  1:2271900/100‑1 (MQ=255)
                                        cGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTccc                                                      <  2:379574/100‑1 (MQ=255)
                                           aaaaTGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCctct                                                   <  2:1319782/100‑1 (MQ=255)
                                            aaaTGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCtctc                                                  <  2:29895/100‑1 (MQ=255)
                                              aTGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCAc                                                <  2:1087503/100‑1 (MQ=255)
                                               tGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCAcc                                               >  2:1711749/1‑100 (MQ=255)
                                                gTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAATTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCAccc                                              <  2:2917894/100‑1 (MQ=255)
                                                 tCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGTGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCt                                             <  2:1600487/100‑1 (MQ=255)
                                                 tCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCt                                             <  1:2116702/100‑1 (MQ=255)
                                                  cGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTa                                            >  1:1200800/1‑100 (MQ=255)
                                                  cGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTa                                            <  1:2661527/100‑1 (MQ=255)
                                                     ggagATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTACCCTCTCACCCTAAcc                                         >  2:1743140/1‑100 (MQ=255)
                                                        gaTCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCctc                                      >  1:1968225/1‑100 (MQ=255)
                                                          tCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAGGGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCctct                                     >  2:1525840/1‑100 (MQ=255)
                                                          tCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCtctc                                    >  2:853378/1‑100 (MQ=255)
                                                           cGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTcc                                   >  2:73294/1‑100 (MQ=255)
                                                                cgcAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGt                              >  1:1266530/1‑100 (MQ=255)
                                                                 gcAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTg                             <  2:898591/100‑1 (MQ=255)
                                                                 gcAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTg                             <  1:1490817/100‑1 (MQ=255)
                                                                 gcAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTg                             >  2:1062010/1‑100 (MQ=255)
                                                                  cAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTgg                            <  2:2697456/100‑1 (MQ=255)
                                                                  cAGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTgg                            <  2:747768/100‑1 (MQ=255)
                                                                   aGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTggg                           <  1:1613388/100‑1 (MQ=255)
                                                                   aGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTggg                           <  1:2929597/100‑1 (MQ=255)
                                                                   aGGCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTagg                           <  1:1125242/100‑1 (MQ=255)
                                                                    ggCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTgggg                          >  2:1700957/1‑100 (MQ=255)
                                                                    ggCAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTgggg                          <  1:305551/100‑1 (MQ=255)
                                                                      cAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCg                        >  2:107528/1‑100 (MQ=255)
                                                                      cAAAAGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGCTGGGGcn                        <  1:1577231/100‑2 (MQ=255)
                                                                       aaaaGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGa                       <  2:1047757/100‑1 (MQ=255)
                                                                        aaaGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAg                      >  2:2305771/1‑100 (MQ=255)
                                                                         aaGGCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAgg                     <  1:1743151/100‑1 (MQ=255)
                                                                           ggCGCACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAgggg                   <  1:2897590/100‑1 (MQ=255)
                                                                             cgcACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGAc                 >  2:1539840/1‑100 (MQ=255)
                                                                             cgcACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGAc                 <  2:1612204/100‑1 (MQ=255)
                                                                              gcACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTACCCCTCTCCCCGGTGGGGCGAGGGGACt                <  2:134897/100‑1 (MQ=255)
                                                                              gcACACTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACt                <  2:515312/100‑1 (MQ=255)
                                                                               cacaCTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTg               >  2:2852313/1‑100 (MQ=255)
                                                                               cacaCTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTg               <  1:2656385/100‑1 (MQ=255)
                                                                                 cacTAAAGTCAGAGTGAGGGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGa              >  2:399232/1‑100 (MQ=255)
                                                                                 cacTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGAc             >  2:2965498/1‑100 (MQ=255)
                                                                                 cacTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTAAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGAc             <  2:2097961/100‑1 (MQ=255)
                                                                                  acTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGAcc            <  1:1029126/100‑1 (MQ=255)
                                                                                   ttccgatctgagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCg           <  2:2916575/91‑1 (MQ=37)
                                                                                   cTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCg           >  1:214335/1‑100 (MQ=255)
                                                                                   cTAAAGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCg           >  1:2698102/1‑100 (MQ=255)
                                                                                       aGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAgcn       <  2:2600380/100‑2 (MQ=255)
                                                                                       aGTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAgcg       <  1:1539849/100‑1 (MQ=255)
                                                                                        gTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAgcgc      >  2:444042/1‑100 (MQ=255)
                                                                                        gTCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAgcgc      >  1:2661562/1‑100 (MQ=255)
                                                                                         tCAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGcgcg     <  1:2305785/100‑1 (MQ=255)
                                                                                          cAGAGTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGt    >  2:1720991/1‑100 (MQ=255)
                                                                                           agagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGtt   >  1:1307194/1‑100 (MQ=255)
                                                                                            gagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGTCGAGGGGACTGACCGAGCGCGTTg  <  1:2139554/100‑1 (MQ=255)
                                                                                            gagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAgatcgaag  >  1:2916591/1‑93 (MQ=38)
                                                                                            gagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGTTg  <  1:2170032/100‑1 (MQ=255)
                                                                                            gagTGA‑GGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGTTg  <  2:501773/100‑1 (MQ=255)
                                                                                                  |                                                                                              
CCGAAGCCAACGGCGAAAGAAACGCCGTATGAACCAATGCCGGAAAATGTCGAGGAGATCGTGGCGCAGGCAAAAGGCGCACACTAAAGTCAGAGTGAGGGGGGGATGTTGGCGAATGTTGGCTTAGTGCCCAGGGTTCCCTCTCACCCTAACCCTCTCCCCGGTGGGGCGAGGGGACTGACCGAGCGCGTTG  >  NC_000913/631913‑632105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑