| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,588,915 | (G)5→6 | coding (1321/3114 nt) | acrD → | aminoglycoside/multidrug efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,588,910 | 1 | . | G | 96.1% | 273.2 / 4.1 | 78 | coding (1316/3114 nt) | acrD | aminoglycoside/multidrug efflux system |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base G (38/36); total (40/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
TGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑G‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCA > NC_000913/2588811‑2589000 | tggATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCa < 1:342617/100‑1 (MQ=255)tggATGACGCCATCGTGGTGGGGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCa > 2:2047568/1‑100 (MQ=255) ggATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g > 2:2635736/1‑100 (MQ=255) ggATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g > 1:1646941/1‑100 (MQ=255) gACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggg < 1:25760/100‑1 (MQ=255) aCGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑ggggg < 1:2249206/100‑2 (MQ=255) cGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggggc > 1:537361/1‑98 (MQ=255) cGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggggc > 1:1874568/1‑98 (MQ=255) ccATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggggcac < 1:2681050/100‑5 (MQ=255) ccATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCAATGGGGCAGATCCA‑g‑gggggcac > 1:214849/1‑96 (MQ=255) cATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggggcact < 2:104810/100‑6 (MQ=255) cATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g‑gggggcact > 2:2500755/1‑95 (MQ=255) gtggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCggg < 1:676778/100‑1 (MQ=255) gtggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCggg > 1:1308588/1‑100 (MQ=255) tggtggAAAACGTCGAACGTATTATGAGTGAGGCAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCggg > 1:2286117/1‑99 (MQ=255) ggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGAt > 2:414940/1‑100 (MQ=255) gtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGAtt > 2:2321916/1‑100 (MQ=255) tggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTg < 2:1146240/100‑1 (MQ=255) aaaCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGAt > 1:833835/1‑100 (MQ=255) aaaCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGAt < 1:2500770/100‑1 (MQ=255) aCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATgg < 1:657344/100‑1 (MQ=255) cGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATgg > 2:74321/1‑99 (MQ=255) cGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGt > 1:2800609/1‑100 (MQ=255) cGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGt > 2:952217/1‑100 (MQ=255) tCGACCGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTc > 1:1409874/1‑100 (MQ=255) cGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCt > 1:217730/1‑100 (MQ=255) gAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCtt > 2:391935/1‑100 (MQ=255) aaCGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCttt < 1:19271/100‑1 (MQ=255) aCGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTc < 2:2746334/100‑1 (MQ=255) cGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTcg < 2:1409866/100‑1 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTcggc < 1:2173397/100‑1 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTcggc < 2:179987/100‑1 (MQ=255) attatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcg > 1:2987837/1‑100 (MQ=255) attatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTcggc < 2:2295599/99‑1 (MQ=255) tatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGt < 2:2476212/100‑1 (MQ=255) atGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTa > 1:835261/1‑100 (MQ=255) tgagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAt > 1:668848/1‑100 (MQ=255) gagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAtt < 1:2614004/100‑1 (MQ=255) gagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCAATGGTTCTTTCGGCGGTAt > 2:1259452/1‑99 (MQ=255) agtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAttt > 2:2565473/1‑100 (MQ=255) gtgagGCAGGACTCCCTCCTCGCGAGGCCACACGTAAATCGATGGGGCAGAGCCA‑GAGGGGCACTGGTCGGGAGTGCGATGGTTCTTGCGGCGGTATTTg < 2:2286105/100‑1 (MQ=255) tgagGAAGGACTCACTCCTCGCGAAGCCACACTTAAATCGATGTGGCAGATCCATG‑GGGGCACTGGTCGGGATGGCGATGGTTCTTTCGGCGGTATTTGt > 2:597803/1‑100 (MQ=255) tgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGt < 1:211907/100‑1 (MQ=255) gagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTa < 2:251909/100‑1 (MQ=255) gagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTa < 1:1114091/100‑1 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc > 1:970660/1‑100 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc < 1:2244219/100‑1 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc > 2:2725106/1‑100 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc > 1:1342191/1‑100 (MQ=255) ggaaggaCGCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc < 2:2576822/100‑1 (MQ=255) agggCTCACTCCTCGGGGAGCCACACGGAAATCGATGGGGCAGGTCCAGG‑GGGGCACTGGTCGGGAATGCGATGGTTCTTTCGGCGGTATTTGTACCaaa < 2:1874557/100‑2 (MQ=255) aggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAAt > 1:2490654/1‑100 (MQ=255) gaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATgg < 1:1841578/100‑1 (MQ=255) gaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATgg < 2:1263842/100‑1 (MQ=255) ctcactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGcc > 1:1930526/1‑100 (MQ=255) ctaactcCTCGGGAAGACACACGTAAATCGATGGGGCAGATCCAGG‑GGGGGACTGTTCGGGATTGCGATGGTTATTTCGGCAGTATTTGTACCAATGGcc < 2:1468193/97‑1 (MQ=255) cctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCttcttc < 2:537358/100‑1 (MQ=255) cctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCttcttc > 1:2262249/1‑100 (MQ=255) ctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcg < 2:200028/100‑1 (MQ=255) tcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcgg > 1:1548299/1‑100 (MQ=255) cgcgAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggc > 1:1969295/1‑100 (MQ=255) cgcgAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggc < 2:605253/100‑1 (MQ=255) cgcgAAGCCACACGTAAATCGATGGGGCAGATCCA‑G‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggcg > 2:48399/1‑100 (MQ=255) gcgAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggcg < 1:1437026/100‑1 (MQ=255) cgAAGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggcgg < 1:2913104/100‑1 (MQ=255) aaGCCACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGca < 1:414942/100‑1 (MQ=255) ccACACGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGcacca < 1:1163197/100‑1 (MQ=255) cacaCGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGcaccac > 1:2184490/1‑100 (MQ=255) cacaCGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGACTTCTTCGGCGGcacaa > 2:1451914/1‑97 (MQ=255) cacGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCg > 1:1504535/1‑100 (MQ=255) cGTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGt > 2:145879/1‑100 (MQ=255) gTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTg < 1:2565487/100‑1 (MQ=255) gTAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTg < 2:888087/100‑1 (MQ=255) tAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGc > 1:2513393/1‑100 (MQ=255) tAAATCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGc < 1:675281/100‑1 (MQ=255) aaTCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCa > 2:1075075/1‑100 (MQ=255) aTCGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCAt < 2:1308581/100‑1 (MQ=255) cGATGGGGCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCt > 2:1864903/1‑100 (MQ=255) gaggtcgCAGAGCCA‑GTGGTGCACTGGTCGTGATTTCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGTGGCACCAGTGGTGAAATCTa < 2:2789934/94‑1 (MQ=255) ggggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCg < 2:214847/100‑1 (MQ=255) ggggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCg < 1:1549997/100‑1 (MQ=255) ggggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCg > 2:1050593/1‑100 (MQ=255) ggggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCg > 1:209657/1‑100 (MQ=255) nggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGc > 1:2707222/2‑100 (MQ=255) gggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGc > 2:1154297/1‑100 (MQ=255) gggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGc > 1:727194/1‑100 (MQ=255) gggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGc < 1:391937/100‑1 (MQ=255) ggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGcc > 1:2323902/1‑100 (MQ=255) ggCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGcc > 1:2323832/1‑100 (MQ=255) gCAGATCCAGG‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCa < 2:2947625/100‑1 (MQ=255) | TGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑G‑GGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCA > NC_000913/2588811‑2589000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |