| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,765,794 | (C)7→8 | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 97.7% | 464.6 / 3.4 | 133 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base C (66/62); total (69/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 154 total aligned reads displayed.
TTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765688‑2765881 | ttGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTg > 2:1141546/1‑100 (MQ=255) gTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc > 2:2517600/1‑100 (MQ=255) gTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc > 1:2758196/1‑100 (MQ=255) tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑c < 2:2527169/98‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cc > 1:1869757/1‑100 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc > 1:1646133/1‑100 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc < 2:2924400/100‑1 (MQ=255) ctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc > 2:1373994/1‑99 (MQ=255) ctgGCAAATAAGTAATAAGTATCGAGTGGATGCTTGGTGAGATCCGGAAGAGGTTACCGAAACGAGGGACATCAGCCCCCATTTTGTGGACTG‑‑cc < 2:2840108/95‑1 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc‑ccggta < 2:853364/100‑6 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc‑ccggta < 1:1632213/100‑6 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc‑ccggta < 1:1755095/100‑6 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cccc‑ccggta < 2:1723397/100‑6 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAg < 1:1479458/100‑1 (MQ=255) ataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGa < 2:393961/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGTAAGAGGTTACCGAAACGATTGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGAc < 2:1632275/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATTCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGAc < 1:2835013/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCGGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGAc > 2:1733007/1‑100 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGa > 1:2795568/1‑100 (MQ=255) cTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCCTTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATcc > 1:331250/1‑99 (MQ=255) tAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCt > 2:397055/1‑99 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGc < 1:2605903/100‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGCAGACGATACTGc > 1:2105043/1‑100 (MQ=255) aGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGcc < 1:2301746/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGccc < 2:1996731/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGccc < 2:433052/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGccc < 1:2913883/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGccc > 1:941500/1‑100 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGccc < 1:1894266/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCACTTTGTGGACTGA‑CC‑CCCC‑CGGTAGACgcagctgcc > 1:2370991/1‑91 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCt < 2:564314/100‑1 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGCGCGACGCTCCTGCCCt > 1:2921101/1‑100 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCt > 2:2893269/1‑99 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACCGC‑CC‑CCCC‑CGGTAGCCGATCCTGCGCta > 2:2823465/1‑100 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCtat > 1:2611700/1‑100 (MQ=255) cGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCACTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGCCCCTGCCCt > 1:1024294/1‑97 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAg < 2:2288958/100‑1 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAg > 1:1920810/1‑100 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTg < 1:267173/100‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTg < 2:1118049/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCGCATTTTGTGGACTG‑‑CC‑CCCCACGGTAAACGATCATGCCCTATAGTTgg > 1:2802047/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATCGTTgg > 1:740170/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATATTTgg > 1:215666/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTgg > 2:1542280/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTgg < 1:1651268/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CCGGATACGATCCTGccc > 1:2802683/1‑91 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGa < 2:317283/100‑1 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:2260294/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:1253530/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:142040/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg < 1:2535992/100‑1 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg < 2:1257807/100‑1 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:2881321/1‑100 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg < 2:1810520/98‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 1:2581944/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGcccc > 2:1180585/1‑100 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt < 2:617839/100‑1 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt < 1:2351307/100‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTc < 2:893483/100‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:2986798/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:1006432/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:328460/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:2546722/100‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTCGAGGGCCCCCTATTCAGGTGGCTa > 1:284103/1‑99 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtt < 2:919281/100‑1 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtt > 1:2416885/1‑100 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAttt < 2:1024289/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 2:2976037/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:1518229/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 2:1096910/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 2:1715221/1‑100 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 1:2691227/100‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 2:1969190/100‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 2:331248/100‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt > 2:1330866/1‑100 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc > 2:90221/1‑100 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa < 1:473544/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1267452/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:2611685/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa > 1:655495/1‑100 (MQ=255) aCATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:1944235/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:1542289/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac > 2:1871236/1‑100 (MQ=255) catcatCCCCCATATTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca > 1:2026428/1‑100 (MQ=255) catcGCCCGTGTTGTGGACTG‑‑CCGCCCC‑CGGTAGACGATCCTGCCCTAGAGTTGAAGTGCCCCCGATTCAGGTGGCTAAATTTAGCAAATCAAGacac < 2:2861451/98‑1 (MQ=255) atcCCCCATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTc > 1:2287969/1‑100 (MQ=255) ccccATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 2:763576/1‑100 (MQ=255) ctcttttgGTGGATTGC‑CC‑CCCC‑CGGTAGACGAGCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg < 2:2370977/94‑1 (MQ=255) cccATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCCATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 2:427913/1‑100 (MQ=255) ccATTTTGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:604655/99‑1 (MQ=255) aTTTTGTGGACAGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTAGCTAAATTTAGCAAATCAATACACTTCAgggggg > 2:1575888/1‑100 (MQ=255) ttttGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:1897050/99‑1 (MQ=255) tttGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:2986615/100‑1 (MQ=255) ttGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat > 1:2959321/1‑100 (MQ=255) ttGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat > 1:432523/1‑100 (MQ=255) ttGTGGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtat > 1:2235322/1‑100 (MQ=255) gtgGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta > 2:2683291/1‑100 (MQ=255) gtgGACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta < 2:1253524/100‑1 (MQ=255) ggACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 1:1708015/1‑100 (MQ=255) gACTGC‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTACCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 2:2326328/1‑100 (MQ=255) | TTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCCC‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765688‑2765881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |