| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,767,507 | (C)7→8 | intergenic (+152/‑203) | rnlB → / → yfjP | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,767,500 | 1 | . | C | 88.1% | 342.9 / 41.6 | 110 | intergenic (+145/‑210) | rnlB/yfjP | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; 50S ribosome‑binding GTPase family protein |
| Reads supporting (aligned to +/- strand): ref base . (7/6); new base C (37/59); total (45/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.70e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGATTC > NC_000913/2767402‑2767593 | tGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c < 1:377368/100‑1 (MQ=255)tGATATTAACTTGTCCAATATGATCAAATAGCATTAACCACCCCTCACAACGTCCTGCATAGTGAACTCGATTTCCCCTGTGCACCAACGACTAAAa‑tt > 1:558785/1‑99 (MQ=255) gATATTAACTTGTCCAATATGATCAAATAGCATTANCCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c < 1:1932155/100‑1 (MQ=255) gATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c < 2:2314965/100‑1 (MQ=255) tatTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c‑cc < 2:2961140/100‑1 (MQ=255) ttccgatctCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c‑cccc < 2:1376051/92‑1 (MQ=255) ttAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTCCAAAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c‑cccc > 2:2517324/1‑100 (MQ=255) aaCTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCACTGTACGGAACGCGGACACACCTGTTCACCCACGACTAACT‑TT‑‑c > 1:1724056/1‑93 (MQ=255) tGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑Ccttta < 1:1006365/100‑3 (MQ=255) tGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑Ccttta < 1:1352224/100‑3 (MQ=255) tGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑Ccttta < 2:654050/100‑3 (MQ=255) tGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCAAAGGGCACACGTGTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑Ccttta > 2:79130/1‑98 (MQ=255) gTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTaa < 1:798970/100‑1 (MQ=255) ccAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAAc < 2:2196273/100‑1 (MQ=255) ccAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAAc < 1:2177144/100‑1 (MQ=255) ccAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAAc < 2:967116/100‑1 (MQ=255) ccAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTCTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAAc < 2:695843/100‑1 (MQ=255) ccAATATGATCAAATAGCATTAACACCCCCTCACAACCTCCCGCATAGAGAACACGTTTTCCCCTGTGCACCCACGCCTAAAT‑CT‑‑c‑a‑ccccagatcggaa > 1:1376059/1‑91 (MQ=255) cAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACt < 2:271548/100‑1 (MQ=255) cAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACt < 1:662508/100‑1 (MQ=255) cAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑c‑c‑cccc‑ccctttaaac < 2:2195752/100‑10 (MQ=255) tcctGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTCCC‑C‑CCCC‑CTTTAAACtt < 1:2604244/97‑1 (MQ=255) tatGATCAAATAGCATTAACCACCCCTCCCAACGTCCTGCATATTGAACTCGTTTTCCCCTGTGCACCCACTTCTAAAT‑TT‑‑C‑CGTCCC‑CCTTaaa > 1:105698/1‑95 (MQ=255) atGATCAAATAGCATTAACCCCCCCTCACAGCGTCCTGCATAGTGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTtctn < 2:297163/100‑2 (MQ=255) aTCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCaat < 2:254537/100‑1 (MQ=255) tCAAATAGCATTAACCCGCCCTCACAACGTCCTGCAAAGGGAAGACGTTTTCCCCTGTTCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCacta > 2:2891506/1‑100 (MQ=255) cAAATAGCATTAACCCCCCCTCACGACGTCCTGCATAGCCAACACGCCTTCCTCTGTGCCCCCACGACGAAATCAC‑‑C‑C‑CCCC‑CTTTAAACTTCTCaata < 2:1142523/99‑1 (MQ=255) cAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑CACCCC‑CTTTAAACTTCTAaataa > 2:2198005/1‑100 (MQ=255) cAAATAGCATTAACCCCCACTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCaataa > 2:1747439/1‑100 (MQ=255) aaaTAGCATTAACCTCACATCACAACATACTGCATAAGTAATTCTATTTATCATTTGCTCCCTCGACTAAAT‑TT‑‑C‑CTCCCC‑CTTTCATCtttt > 2:2698630/1‑91 (MQ=255) aGCATTAACCCCCCCGCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCa < 2:1622159/100‑1 (MQ=255) cATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATg > 2:1756263/1‑95 (MQ=255) cccccccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAAtttt < 1:1985745/100‑1 (MQ=255) ccccccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCCCCAATTTTc > 2:1427387/1‑100 (MQ=255) ccccccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTc < 1:2330164/100‑1 (MQ=255) ccccccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTc < 1:2436635/100‑1 (MQ=255) cccccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCt < 2:2623367/100‑1 (MQ=255) ttccgatctaCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTg < 1:2356965/91‑1 (MQ=255) ccTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGa > 2:239597/1‑100 (MQ=255) cTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGaa < 2:127698/100‑1 (MQ=255) cacaACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAAt > 2:2835925/1‑100 (MQ=255) acaACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CCTTAAACTTCCTAACAATGTCACCAATTTTCTGGAAATc > 1:924591/1‑100 (MQ=255) aaCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCt < 2:1669507/100‑1 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTgagatcggaa > 2:2356951/1‑91 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa < 1:1917979/100‑1 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa < 1:2333658/100‑1 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa < 1:98803/100‑1 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa > 1:2335246/1‑100 (MQ=255) aCGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa < 1:1395619/100‑1 (MQ=255) cGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTa < 1:1567956/99‑1 (MQ=255) ccTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgat < 1:2145921/100‑1 (MQ=255) tGCATAGGGAACACGTTTTCCCCTTTGCACCCACGTCTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTatgatg < 2:137251/99‑1 (MQ=255) tGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGc > 2:793293/1‑100 (MQ=255) tGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGc > 1:2962149/1‑100 (MQ=255) tGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGc < 1:1747450/100‑1 (MQ=255) gCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGcc > 1:2000004/1‑100 (MQ=255) gCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGcc > 1:2332358/1‑100 (MQ=255) gCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGcc > 1:757806/1‑100 (MQ=255) gCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGcc > 2:261281/1‑100 (MQ=255) gCATAGGGAACACGTTTTCCCCTGTGCACCCACGACAAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGcc > 1:2110147/1‑100 (MQ=255) tAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCttt < 2:2297082/100‑1 (MQ=255) ggAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑CAC‑GCCA‑CTTTAAACCTCTCAAAAATCCTACCAATTTACTCGAAATCCTATGATGCCTTccc > 2:281436/1‑99 (MQ=255) gAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTATCAATAATGTCGCCAATTTTTTGGAAATCCTATGATGCCTTTCCCg > 1:1752298/1‑100 (MQ=255) aaCACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCgg > 2:2006245/1‑100 (MQ=255) aaCACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCgg < 1:2198017/100‑1 (MQ=255) aaCACGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCg > 2:944864/1‑99 (MQ=255) acacGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGt < 1:2619647/100‑1 (MQ=255) cacGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTa > 2:96833/1‑100 (MQ=255) cacGTTTTCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTa < 1:1410248/100‑1 (MQ=255) cacGTTTTCCCCTGTGCACACACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCACTAATGTCACCAATTTCCTGAAAATCCTATGATCCCTTTCACGGtc > 2:2664517/1‑99 (MQ=255) acGTTTTCCCCTGAGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTaa < 1:630088/100‑1 (MQ=255) gTTTTCCCCTGTGCACCCACGACTAACT‑TT‑‑C‑C‑CCCCTCTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTACAt > 2:1405685/1‑100 (MQ=255) gTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑CTC‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAAt < 2:2828778/100‑1 (MQ=255) ttttCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAATCTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATg < 1:2698646/100‑1 (MQ=255) ttttCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATg < 2:94742/100‑1 (MQ=255) tCCCCTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATggcg < 1:2026549/100‑3 (MQ=255) ccccTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGc < 1:1036948/100‑1 (MQ=255) cccTGTGCACCCACGACTAAAT‑TT‑‑‑‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgt > 1:1175036/1‑100 (MQ=255) ccTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtg < 2:1674370/100‑1 (MQ=255) ccTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtg > 2:2975533/1‑100 (MQ=255) cTGTGCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgt < 1:2695385/100‑1 (MQ=255) tgtgCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTATACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgtg < 1:319578/100‑1 (MQ=255) tgtgCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgtg < 2:2547092/100‑1 (MQ=255) tgtgCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgtg < 2:17828/100‑1 (MQ=255) tgtgCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCtgt > 2:1706107/1‑99 (MQ=255) tgCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAg < 2:641314/100‑1 (MQ=255) gCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGt < 1:1273929/100‑1 (MQ=255) gCACCCACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGt < 1:2517339/100‑1 (MQ=255) cccACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCa < 2:2650752/100‑1 (MQ=255) cccACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCa > 1:2670073/1‑100 (MQ=255) cccACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAAGGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCa > 1:2964641/1‑100 (MQ=255) cACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGa > 2:195503/1‑100 (MQ=255) cACGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGa > 1:2529553/1‑100 (MQ=255) cGACTAAAT‑TTCCC‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGaa > 1:2660137/1‑100 (MQ=255) cGACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGaaa < 1:1092843/100‑1 (MQ=255) gACTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAg < 2:2725643/100‑1 (MQ=255) aCTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGa > 2:1698196/1‑100 (MQ=255) aCTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGa > 2:184371/1‑100 (MQ=255) aCTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGa > 1:77312/1‑100 (MQ=255) cTAAAT‑TTC‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGAt > 2:533362/1‑100 (MQ=255) | TGATATTAACTTGTCCAATATGATCAAATAGCATTAACCCCCCCTCACAACGTCCTGCATAGGGAACACGTTTTCCCCTGTGCACCCACGACTAAAT‑TT‑‑C‑C‑CCCC‑CTTTAAACTTCTCAATAATGTCACCAATTTTCTGGAAATCCTATGATGCCTTTCCCGGTAAATGGTGCTGTGAGTTCAGAAAGATTC > NC_000913/2767402‑2767593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |