| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,459,293 | (G)5→6 | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 94.2% | 305.2 / 11.3 | 88 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (28/54); total (31/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459189‑3459382 | tGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑gg‑t < 2:2160047/100‑1 (MQ=255) ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑gg‑t‑g > 1:1453335/1‑100 (MQ=255) ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑gg‑t‑g > 1:387045/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGTGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑gg < 2:628211/100‑1 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑gg > 2:2161982/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑gg < 2:2832519/100‑1 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑gg < 1:2320860/100‑1 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑ggggg > 2:1521537/1‑99 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑ggggg < 2:2452784/100‑2 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑ggggga < 2:950286/100‑3 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑ggggga > 1:2585663/1‑98 (MQ=255) aTTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑g‑gggggaa > 2:1216646/1‑97 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAAtt > 2:1887895/1‑100 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAAtt < 1:2612275/100‑1 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATAGGTCTTTCGCTCGCGGCGTGCGCGCCATGCTTCGCCAGGACCCGGATGGCGTCAT‑GG‑TGG‑GGGGAAAtt < 2:2193147/100‑1 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTc > 1:532931/1‑100 (MQ=255) gCAAATGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCg < 2:1041840/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTg < 2:778283/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTg < 1:1485800/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGa > 1:1957299/1‑100 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCGGCGCGCCAAACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGa < 2:1281756/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGAt < 1:1887906/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGAt < 2:1413471/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGAt < 1:2568620/100‑1 (MQ=255) cGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATa > 2:300493/1‑100 (MQ=255) gCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATAc < 2:702991/100‑1 (MQ=255) cAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACa > 1:618965/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGa > 2:1534215/1‑100 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGaa < 1:765105/100‑1 (MQ=255) tGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGaaa > 2:1501852/1‑100 (MQ=255) aTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCAGACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAg < 2:1504870/94‑1 (MQ=255) aCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACcgcg < 1:864787/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCgcgc > 1:734364/1‑100 (MQ=255) gtgtGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGa < 1:1976681/100‑1 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAt < 2:2492689/100‑1 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAt < 2:2677650/100‑1 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAt < 1:208578/100‑1 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAt < 2:1924727/100‑1 (MQ=255) gtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAtt < 2:2971848/100‑1 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGAtt > 1:548918/1‑99 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTg < 2:2512172/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGc < 2:1652190/100‑1 (MQ=255) ccgatctacTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCg < 2:310891/92‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:477083/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:2268587/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2646168/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:2464571/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGAACCCGGATGTCGTCAT‑GG‑TAG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg > 2:1635334/1‑100 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 1:2715222/100‑1 (MQ=255) atGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:352511/98‑1 (MQ=255) tGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCACAGATTGCGGTTc > 1:1737725/1‑100 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg > 1:1026780/1‑100 (MQ=255) acTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgagatcgg > 1:310893/2‑93 (MQ=255) cTTTCGCTCGCGGTCTGCGCGCCATACTACGACAGGACCCGGATGTCGTCAT‑GGAG‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATCGCGGttga > 2:2586426/1‑96 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc > 2:1582118/1‑100 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 1:394539/100‑1 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc > 2:683865/1‑100 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc < 1:2328884/100‑1 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 2:43992/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 1:2895/1‑100 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGAAGATTGCGGTTCAGGCCTCGCTCAcc > 2:598982/1‑100 (MQ=255) gCCTGGGCGCCATACTTCGCCAGGACCCGGGTGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCGGCGCCCACCg < 2:366877/100‑1 (MQ=255) gcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTg < 2:387043/100‑1 (MQ=255) ccATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgg < 2:1453327/100‑1 (MQ=255) ccATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgg < 2:1981198/100‑1 (MQ=255) ttccgatctcAGTACCCGGATGTCGTCAT‑GG‑T‑GCGGTGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 2:988320/90‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc > 2:1642370/1‑100 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:589554/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:2365915/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 1:2816489/100‑1 (MQ=255) gatctCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 1:1514914/96‑1 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:1692344/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc < 1:1773660/100‑1 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATGGG‑G‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 1:1544384/100‑1 (MQ=255) ttCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 2:618962/100‑1 (MQ=255) tCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCGATCTGGTACtctc < 1:2005753/100‑1 (MQ=255) tCGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACtctc < 2:2781948/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 2:2877198/98‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAcagatc > 2:1514905/1‑95 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:2832837/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:2151973/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:403294/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 2:1101816/1‑100 (MQ=255) cAGGACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTagatcggaag > 1:988325/1‑91 (MQ=255) gACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTc > 1:903773/1‑100 (MQ=255) gACCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTc < 1:1904146/100‑1 (MQ=255) aCCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCTTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 1:1780226/100‑1 (MQ=255) aCCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 1:933764/100‑1 (MQ=255) aCCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 1:2874723/100‑1 (MQ=255) aCCCGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 1:300495/100‑1 (MQ=255) cccGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 1:550277/1‑100 (MQ=255) cccGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 1:1647250/1‑100 (MQ=255) ccGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 1:574696/100‑1 (MQ=255) ccGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 2:1759343/100‑1 (MQ=255) cGGATGTCGTCAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcaca > 1:810587/1‑100 (MQ=255) gtcAT‑GG‑TGG‑GGGGACATCCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGCTACTCTCAACACTCCACCCTAACAGt > 2:1226063/1‑100 (MQ=255) tcAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg > 1:2136608/1‑100 (MQ=255) tcAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg > 1:889473/1‑100 (MQ=255) cAT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 2:903770/100‑1 (MQ=255) aT‑GG‑TGG‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCa < 2:442380/100‑1 (MQ=255) | TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑G‑GGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459189‑3459382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |