| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,951,598 | +T | pseudogene (57/663 nt) | ilvG → | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,951,597 | 1 | . | T | 95.3% | 442.3 / 12.5 | 127 | pseudogene (56/663 nt) | ilvG | pseudogene, acetolactate synthase 2 large subunit, valine‑insensitive; acetolactate synthase II, large subunit, cryptic, interrupted |
| Reads supporting (aligned to +/- strand): ref base . (4/2); new base T (60/61); total (64/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAC > NC_000913/3951498‑3951691 | tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCa > 2:2653502/1‑100 (MQ=255)tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCa > 1:1905638/1‑100 (MQ=255)tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCa < 2:677021/100‑1 (MQ=255)tttAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCa > 1:1180019/1‑100 (MQ=255) tAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑tt < 1:831990/100‑2 (MQ=255) aTGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑ttccc > 2:164339/1‑96 (MQ=255) gCTCTGTTACCAGCATTACAGCAGCCGTTAGATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCg‑g < 1:210665/100‑1 (MQ=255) ctctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑Gt > 2:2624423/1‑100 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTg < 2:416320/100‑1 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTg < 1:1360451/100‑1 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTg > 2:1991465/1‑100 (MQ=255) tctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTg < 2:2450387/100‑1 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGa > 2:2151596/1‑100 (MQ=255) ctGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGa < 2:2334305/100‑1 (MQ=255) tGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACg > 1:475840/1‑100 (MQ=255) ggTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGAAGCTCCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑ATGa > 2:1239451/2‑99 (MQ=255) tACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCt > 1:2162268/1‑100 (MQ=255) aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTa > 1:1054160/1‑100 (MQ=255) aCCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTa > 1:128161/1‑100 (MQ=255) ccAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTAt > 2:1497858/1‑100 (MQ=255) cAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATc > 2:720386/1‑100 (MQ=255) gCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTa > 1:299179/1‑100 (MQ=255) cATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTAc < 1:428802/100‑1 (MQ=255) tACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTAcgcg < 2:1697958/100‑1 (MQ=255) aCAGCTGCCGTTTAATCAATTATTGTCAGTAACTGTGTTCGCAGCTGCGTTATGAACTTTCCTGGCGTTACGACCATTCCCG‑GTGACTCTATCTAcgctc < 2:125390/100‑3 (MQ=255) aCAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACgcgc > 1:1552406/1‑100 (MQ=255) agcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCg > 2:1756049/1‑100 (MQ=255) agcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCg > 2:2926041/1‑100 (MQ=255) gcagcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCgt > 1:175603/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCgttgt > 2:2829668/1‑100 (MQ=255) gcCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCgttgt < 1:1087321/100‑1 (MQ=255) ccGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCgttgt > 1:1674932/1‑99 (MQ=255) aaaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTaa > 2:890728/1‑100 (MQ=255) aaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTaaa < 1:2720115/100‑1 (MQ=255) aaTCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTaaa < 1:972063/100‑1 (MQ=255) tCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaac > 2:1373967/1‑100 (MQ=255) tCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaaca < 2:475837/100‑1 (MQ=255) cAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaaca > 1:1758563/1‑100 (MQ=255) aaTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaacaa > 2:1225992/1‑100 (MQ=255) aaTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaacaac > 2:114015/1‑100 (MQ=255) aTGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAaacaac < 1:2332591/100‑1 (MQ=255) gACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTg < 2:2246923/100‑1 (MQ=255) aCTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGt > 1:12459/1‑100 (MQ=255) gcagcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGa > 2:1613709/1‑100 (MQ=255) gcagcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGa > 1:590288/1‑100 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg < 2:1897999/100‑1 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg > 2:846514/1‑100 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg < 1:2653517/100‑1 (MQ=255) gcaACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCg < 2:1758552/100‑1 (MQ=255) caACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGt > 2:2220607/1‑100 (MQ=255) caACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGt > 2:1450935/1‑100 (MQ=255) aaCACTGTGCGAAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTa > 2:1565182/1‑100 (MQ=255) aaCACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTa < 1:2540914/100‑1 (MQ=255) acacTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTaa > 2:1537631/1‑100 (MQ=255) cTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAcc > 2:1155366/1‑100 (MQ=255) cTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAcc < 1:1313240/100‑1 (MQ=255) cTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAAcc > 1:1701944/1‑100 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCgg < 2:590285/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCgg < 1:637962/100‑1 (MQ=255) cgcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCgg < 2:1365546/100‑1 (MQ=255) gcAGCTGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTCTTAAAACAACTGTCGGATCGTAAACCTGCGGa < 1:2829684/100‑1 (MQ=255) cTGCATGATGAACTTTCCTGGAGTTACAGCAATTACCG‑GTGACGCTAACTACGCGCCGTTGTTGTTAAAACAACTGTGTGATCGTAAACCTGCGGATTGc < 2:547881/100‑1 (MQ=255) tGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcg < 1:2310177/100‑1 (MQ=255) tGCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcg > 1:887782/1‑100 (MQ=255) gCGTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgt < 2:1919049/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 1:846517/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg < 2:721897/100‑1 (MQ=255) gTGATGAACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcg > 1:2967706/1‑100 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcgt > 2:48918/1‑100 (MQ=255) tgatgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcgt > 1:1904327/1‑100 (MQ=255) gatgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTg > 1:1527365/1‑100 (MQ=255) gatgaACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGcgtcgt > 2:342360/1‑98 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc < 2:43775/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc < 1:1327945/100‑1 (MQ=255) tgaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAc < 1:2197919/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 1:2220619/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc < 2:408696/100‑1 (MQ=255) gaACATTCCTGGCGTTACGACCATTCACG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGAcc > 1:1817708/1‑100 (MQ=255) aaCATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca > 1:1789020/1‑100 (MQ=255) aaCATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACca > 2:1952943/1‑100 (MQ=255) cATTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACcaca > 1:524745/1‑100 (MQ=255) aTTCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAg < 2:717356/100‑1 (MQ=255) ttCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGa < 1:2124888/100‑1 (MQ=255) tCCTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAt > 2:1447191/1‑100 (MQ=255) ccTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtg > 1:1549036/1‑100 (MQ=255) ccTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtg < 1:1450943/100‑1 (MQ=255) cTGGCGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGAtgt > 1:592137/1‑100 (MQ=255) ngTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgggg > 1:1452889/2‑100 (MQ=255) cGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgggg < 2:43935/100‑1 (MQ=255) cGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgggg < 2:43596/100‑1 (MQ=255) cGTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTgggg < 2:1701933/100‑1 (MQ=255) gTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:2540852/100‑1 (MQ=255) gTTACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgc < 2:1407733/100‑1 (MQ=255) ttACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgca < 1:93519/100‑1 (MQ=255) tACGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcag > 2:1612930/1‑100 (MQ=255) aCGACCA‑TTCCGTATGACGCTATCTACGCGCCGTTGTTGTGAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagc < 2:2864745/100‑1 (MQ=255) cGACCATTCCCG‑GTGACGCTATTTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagca < 2:2017459/100‑1 (MQ=255) cGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagca > 1:2580666/1‑100 (MQ=255) cGACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGgcagca < 1:1022083/100‑1 (MQ=255) gACCATTCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAc > 1:2545580/1‑100 (MQ=255) | TTTAAATGCTCTGTTACCAGCATTACAGCAGCCGTTAAATCAATGACTGGCAGCAACACTGCGCGCAGCTGCGTGATGAACATTCCTGGCGTTACGACCA‑TCCCG‑GTGACGCTATCTACGCGCCGTTGTTGTTAAAACAACTGTCGGATCGTAAACCTGCGGATTGCGTCGTGACCACAGATGTGGGGCAGCAC > NC_000913/3951498‑3951691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |