| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2085653 = | 145 (1.200) | 7 (0.060) | 7/180 | 13.3 | 5.2% | intergenic (‑128/+51) | yeeE/plaP | UPF0394 family inner membrane protein/putrescine importer, low affinity |
| ? | NC_000913 | 2085687 = | 121 (1.100) | intergenic (‑162/+17) | yeeE/plaP | UPF0394 family inner membrane protein/putrescine importer, low affinity | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GCTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCTCCGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2085760‑2085653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggtttATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGCAGCC > NC_000913/2085687‑2085785 GCTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGC < 1:872900/100‑1 CTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCT > 1:1691132/1‑100 TGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCTCC < 2:564399/100‑1 GCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCGTAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGTCTCCG > 1:2590093/1‑100 GTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCTCCGGT > 1:2781088/1‑100 TCTAATAATAAACCGGAGTCGAACGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAG > 2:240028/1‑100 AATAAACCGGAGTCGAATGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTG > 1:876485/1‑100 ATAAACCGGAGTCGAATGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTG > 2:2380903/1‑99 AACCGGAGTCGAATGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGA > 1:551219/1‑100 CGGAGTCGAATGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGC > 2:1406919/1‑100 AGTCGAATGAACATTTGGCTCCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAG < 1:1406927/100‑1 CGAATGAACATTTGACTCCGGTTTATTATTAGAAAAGATGACTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCA > 2:1630352/1‑100 CCGGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGAT < 2:817561/99‑1 GGTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGC > 2:2000247/1‑100 GTTTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGCA > 1:1211365/1‑100 TTATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGCAGC < 2:551216/100‑1 TATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGCAGCC > 1:1134191/1‑100 GCTTGCGTCACCAAGAGCTTCCGTAATCCGGTTCCGCAGTACGAAGACGTAGCATAATCATCTTTTCTAATAATAAACCGGAGTCGAATGAACATTTGGCTCCGGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2085760‑2085653‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggtttATTATTAGAAAAGATGATTATGCTACGTCTTCGTACTGCGGAACCGGATTACGGAAGCTCTTGGTGACGCAAGCCAGGTAAATCAGACCGATAGCAGCC > NC_000913/2085687‑2085785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |