| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3181589 = | NA (NA) | 5 (0.050) | 5/176 | 14.4 | NA | intergenic (+8/+30) | ygiC/ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase |
| ? | NC_000913 | 3181615 = | NA (NA) | intergenic (+34/+4) | ygiC/ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
ATGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3181698‑3181589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccggtaATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAAC > NC_000913/3181615‑3181712 ATGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTG < 2:317862/100‑1 TGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGC < 1:1761383/100‑1 TGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGC < 2:868384/100‑1 TGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGC < 2:867374/100‑1 GGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCA > 1:2388702/1‑100 GGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCA < 2:61091/100‑1 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 1:1372976/1‑100 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 1:1899010/1‑100 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 1:2027322/1‑100 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 1:2672416/1‑100 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 2:423701/1‑100 GGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCG > 2:1710510/1‑100 GAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCGG < 2:2322815/100‑1 AGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCGGT < 1:2140440/100‑1 AGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCACATTTCTATACTCTCAAC > 1:1292761/1‑99 tCTAACAATTACCGGATGGCGAGTGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATG < 2:88864/99‑1 GCTAACAATTACCGGATGGCGAGTGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATG > 1:56546/1‑100 AACAATTACCGGATGGCGAGTGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGaga > 1:88866/1‑97 TTACCGGATGGCGAGTGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGG > 1:93986/1‑100 CATCCTGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGC < 2:282496/100‑1 CATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGC > 2:1551332/1‑100 CATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGC > 1:947469/1‑100 CATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGC < 1:934514/100‑1 CATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGC < 1:592298/100‑1 ATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCA > 2:108182/1‑100 ATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCA < 2:2922983/100‑1 CCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACC < 2:2431949/100‑1 CGGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCT < 2:214761/100‑1 GGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTA > 1:2251487/1‑100 GGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTA > 2:432467/1‑100 GGTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTA > 2:1196194/1‑100 GTAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAA > 2:421424/1‑100 TAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAAC < 2:56545/100‑1 TAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAAC < 2:640367/100‑1 TAATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAAC < 1:231309/100‑1 ATGGGCAGGAGCCAATTACCATTCCGGTTGAGGGTATAGAAATGGGCAGCCTGAGTATGCTGTCGGTGCAGATAGGCTAACAATTACCGGATGGCGAGTGCCATCCGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3181698‑3181589‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccggtaATTGTTAGCCTATCTGCACCGACAGCATACTCAGGCTGCCCATTTCTATACCCTCAACCGGAATGGTAATTGGCTCCTGCCCATCCCACGCACCTAAC > NC_000913/3181615‑3181712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |