BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,244,481	A→G	V16A (GTC→GCC)	ycgR ←	flagellar velocity braking protein, c‑di‑GMP‑regulated

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,244,481	0	A	G	100.0%	391.7 / NA	106	V16A (GTC→GCC)	ycgR	flagellar velocity braking protein, c‑di‑GMP‑regulated
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (64/42); total (64/42)

Only 100 of 106 total aligned reads displayed.

TATTGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGACGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGTCAC  >  NC_000913/1244390‑1244573

tATTGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAAc                                                                                      >  1:13168/1‑100 (MQ=255)

 aTTGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACg                                                                                     <  1:479816/100‑1 (MQ=255)

 aTTGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACg                                                                                     >  1:1063275/1‑100 (MQ=255)

   tGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGa                                                                                   >  1:2061676/1‑100 (MQ=255)

   tGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGAAAATCGCGTAACACGCCCAGGGCGGCTAACGGa                                                                                   >  1:238096/1‑100 (MQ=255)

    gcaaGTAATTTGCTGATCAGCTACCCACAATTCCAACTGAGAAGCAAAGGAATTGAGAATTAGTGCAAATCGCGTAACACGCCCAGGGAGGCTAACGGAt                                                                                  <  2:1295502/97‑1 (MQ=255)

    gCCAGTAATTTGTTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAt                                                                                  <  2:993164/100‑1 (MQ=255)

    gCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAt                                                                                  >  1:277055/1‑100 (MQ=255)

    gCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAt                                                                                  >  2:157421/1‑100 (MQ=255)

    gCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAt                                                                                  >  2:900460/1‑100 (MQ=255)

    gCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTAAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACgg                                                                                    >  2:1840285/1‑98 (MQ=255)

     ccAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAtt                                                                                 >  1:2734529/1‑100 (MQ=255)

      cAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAttt                                                                                >  2:2423505/1‑100 (MQ=255)

       aGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGAtttt                                                                               <  2:669841/100‑1 (MQ=255)

        gTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTg                                                                              >  1:158412/1‑100 (MQ=255)

        gTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTg                                                                              <  2:1723676/100‑1 (MQ=255)

            tttGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTc                                                                          <  1:222417/100‑1 (MQ=255)

            tatGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTc                                                                          >  1:2025841/3‑100 (MQ=255)

             ttGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTc                                                                          >  1:445299/1‑99 (MQ=255)

              tGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAg                                                                        <  2:1076723/100‑1 (MQ=255)

               gCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAgg                                                                       >  2:1131110/1‑100 (MQ=255)

                cTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGa                                                                      >  2:787090/1‑100 (MQ=255)

                cTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGa                                                                      <  2:913953/100‑1 (MQ=255)

                 tGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGaa                                                                     >  1:854847/1‑100 (MQ=255)

                  gATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTTCGGCTTTGGGCAAATGGCCTAACACCCCCAGGGCGGATAACGGATTTTGTCTCAgatcg                                                                    >  1:1516606/1‑96 (MQ=255)

                  gATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAAc                                                                    >  2:1684795/1‑100 (MQ=255)

                    tCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTg                                                                  <  2:1570046/100‑1 (MQ=255)

                     cAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGc                                                                 <  1:130632/100‑1 (MQ=255)

                      aGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCt                                                                >  2:2201713/1‑100 (MQ=255)

                       gCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGAATTTTGTTTCAgatcggaag                                                                <  2:1516597/99‑9 (MQ=255)

                       gCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAAGGCGGCAAACGGAATTTGTTTCAGGAACTGCTc                                                               >  1:1122254/1‑100 (MQ=255)

                        cTGCCCGCCATTCCAACTGAGACGCAGAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCa                                                              >  2:2222100/1‑100 (MQ=255)

                         tGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCAt                                                             <  2:872745/100‑1 (MQ=255)

                         tGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCAt                                                             >  1:392884/1‑100 (MQ=255)

                          gCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATg                                                            >  1:783131/1‑100 (MQ=255)

                          gCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATg                                                            >  1:1011539/1‑100 (MQ=255)

                            ccGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGt                                                          >  1:2052693/1‑100 (MQ=255)

                             cGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTa                                                         >  2:1149014/1‑100 (MQ=255)

                             cGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTa                                                         >  1:1937681/1‑100 (MQ=255)

                               ccATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAAt                                                       <  2:783128/100‑1 (MQ=255)

                               ccATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAAt                                                       <  2:378065/100‑1 (MQ=255)

                               ccATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAAt                                                       <  2:208390/100‑1 (MQ=255)

                                cATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATg                                                      <  2:2794160/100‑1 (MQ=255)

                                 aTTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGa                                                     >  2:1456421/1‑100 (MQ=255)

                                 aTTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGa                                                     <  2:2660521/100‑1 (MQ=255)

                                 aTTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGa                                                     >  2:1503718/1‑100 (MQ=255)

                                 aTTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGa                                                     <  1:2452616/100‑1 (MQ=255)

                                 aTTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGa                                                     >  2:2214243/1‑100 (MQ=255)

                                  ttCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGTGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGAc                                                    <  1:2178510/100‑1 (MQ=255)

                                  ttCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGAc                                                    >  1:454627/1‑100 (MQ=255)

                                    ccAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTc                                                  >  1:1194555/1‑100 (MQ=255)

                                    ccAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTc                                                  <  2:2232045/100‑1 (MQ=255)

                                     cAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCa                                                 >  1:1314044/1‑100 (MQ=255)

                                     cAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCa                                                 >  1:2554798/1‑100 (MQ=255)

                                        cTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCAcgc                                              >  2:1522377/1‑100 (MQ=255)

                                        cTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCAcgc                                              >  1:1913939/1‑100 (MQ=255)

                                            gaCGCAAAGGAATTTCGGCTTTGTGCAAAGCGCGTAACACGCGCAAGGCGGCGTACGGATATTGTTGCAGGAACTTCTCACGATCACGACTCAcacg                                             >  2:589536/1‑97 (MQ=255)

                                            gaCGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGaa                                          >  2:2319943/1‑100 (MQ=255)

                                              cGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGaaaa                                        >  1:522237/1‑100 (MQ=255)

                                              cGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGaaaa                                        >  1:428731/1‑100 (MQ=255)

                                              cGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGaaaa                                        >  1:1726046/1‑100 (MQ=255)

                                                cAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAAc                                      >  2:723743/1‑100 (MQ=255)

                                                cAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAAc                                      >  2:914827/1‑100 (MQ=255)

                                                 aaaGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACt                                     <  1:2989736/100‑1 (MQ=255)

                                                   aGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTcc                                   <  1:2351086/100‑1 (MQ=255)

                                                   aGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTcc                                   <  1:1574446/100‑1 (MQ=255)

                                                   aGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTcc                                   <  2:392882/100‑1 (MQ=255)

                                                    ggAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCct                                  >  1:1063460/1‑100 (MQ=255)

                                                       aTTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCctgac                               <  1:2294614/100‑1 (MQ=255)

                                                        ttGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCctgact                              <  2:854844/100‑1 (MQ=255)

                                                          gCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAGCTCctgactc                             <  2:1970715/99‑2 (MQ=255)

                                                          gCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCctgactga                            >  1:91526/1‑100 (MQ=255)

                                                          gCGGCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCctgactga                            >  2:2746649/1‑100 (MQ=255)

                                                            ggCTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACa                          <  1:19450/100‑1 (MQ=255)

                                                              cTTTGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCATGACTGACaaa                        >  2:2822756/1‑100 (MQ=255)

                                                               tttGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAAc                       <  1:1522386/100‑1 (MQ=255)

                                                               tttGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAAc                       <  2:954421/100‑1 (MQ=255)

                                                               tttGTGCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAAc                       <  2:2710610/100‑1 (MQ=255)

                                                                 tgtgCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTg                     >  2:1467572/1‑100 (MQ=255)

                                                                  gtgCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACGAACTGt                    >  1:991609/1‑100 (MQ=255)

                                                                  gtgCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGt                    >  2:2980646/1‑100 (MQ=255)

                                                                    gCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGt                    >  1:260530/1‑98 (MQ=255)

                                                                    gCAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCt                  >  2:549832/1‑100 (MQ=255)

                                                                     cAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCtt                 >  1:1410815/1‑100 (MQ=255)

                                                                     cAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCtt                 >  2:1808180/1‑100 (MQ=255)

                                                                     cAAATCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCtt                 >  2:539944/1‑100 (MQ=255)

                                                                       aaTCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTg               >  2:2147203/1‑100 (MQ=255)

                                                                        aTCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTgg              >  1:1017755/1‑100 (MQ=255)

                                                                        aTCGCGTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTgg              >  1:439384/1‑100 (MQ=255)

                                                                          cgcgTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGtt            <  1:1149020/100‑1 (MQ=255)

                                                                            cgTAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTa          >  1:2930610/1‑100 (MQ=255)

                                                                              tAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATc        <  1:2746665/100‑1 (MQ=255)

                                                                              tAACACGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATc        >  1:2279742/1‑100 (MQ=255)

                                                                                acacGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCgg      <  2:158410/100‑1 (MQ=255)

                                                                                acacGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCgg      >  2:1256971/1‑100 (MQ=255)

                                                                                acacGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCgg      <  1:1345483/100‑1 (MQ=255)

                                                                                 cacGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGt     >  1:2328002/1‑100 (MQ=255)

                                                                                  acGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGTc    <  1:952421/100‑1 (MQ=255)

                                                                                  acGCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGTc    <  1:2759672/100‑1 (MQ=255)

                                                                                    gCCCAGGGCGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGTcac  <  1:1842516/100‑1 (MQ=255)

TATTGCCAGTAATTTGCTGATCAGCTGCCCGCCATTCCAACTGAGACGCAAAGGAATTGCGGCTTTGTGCAAATCGCGTAACACGCCCAGGACGGCTAACGGATTTTGTTTCAGGAACTGCTCATGGTAATGACTCACGCGGAAAAACTCCTGACTGACAAACTGTCTTTGGTTTATCGGTCAC  >  NC_000913/1244390‑1244573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`