| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,645,886 | (C)5→4 | 100% | coding (1440/2313 nt) | pbpC ← | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,645,882 | 0 | C | . | 95.8% | 513.2 / 13.6 | 118 | coding (1444/2313 nt) | pbpC | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Reads supporting (aligned to +/- strand): ref base C (1/4); new base . (64/49); total (65/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
TGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTG > NC_000913/2645783‑2645977 | tGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCAcgccgc < 1:2034813/100‑1 (MQ=255)tGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCAcgccgc > 2:154595/1‑100 (MQ=255) ggTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACgccgcc < 2:2475041/100‑1 (MQ=255) ggTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACgccgcc < 1:1163813/100‑1 (MQ=255) tGCCTGTGTTGCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATACGGCAAGGGTTGCGCGTCATCAGCGATAATCCGGCGAATGCTCCACGCCGgccc > 1:1359524/1‑100 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc < 1:219531/100‑1 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc > 1:1729419/1‑100 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc > 2:730282/1‑100 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGTCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 1:729407/1‑98 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccga < 2:2552860/100‑3 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 2:29485/1‑98 (MQ=255) ccGTTTTCCATGCCAGTGGGGCGACTCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac < 2:848611/100‑4 (MQ=255) ccGTTTTCCATGCCAGGGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac < 1:1229022/100‑4 (MQ=255) ccGTTTTCCATCCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgac > 1:1522392/1‑97 (MQ=255) tttCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACa < 1:2679075/100‑1 (MQ=255) ttCTATGCTAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCATGCCG‑CCCCGACGACAt < 1:1997629/100‑1 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACaat > 2:2700689/1‑97 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTa > 2:1767378/1‑100 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTa > 1:1841025/1‑100 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTa > 1:631889/1‑100 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTa > 2:328372/1‑100 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGATGCGCTTCATCAGCCATAATCCGGCGACTGATCCACGCCG‑CCCCgacgacc > 1:1904429/1‑96 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCCGCCCTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 1:2902367/1‑100 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 2:1875926/1‑100 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 2:2333262/1‑100 (MQ=255) gCCAGTGGGGCGACGCGCGGCAAGGCACTATCCTGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAgg < 2:2620906/100‑1 (MQ=255) gCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAg > 1:1196724/1‑99 (MQ=255) ccAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGc < 1:2877853/100‑1 (MQ=255) ccAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGc > 2:850579/1‑100 (MQ=255) cAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCTACGACATTAAAGGc < 1:2486337/99‑1 (MQ=255) gTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCCCTTCATCAGACATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGcc < 1:560744/98‑1 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTc < 1:59108/100‑1 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTc < 2:1256012/100‑1 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGCCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGAGCCACGCCGCCCCCGACGACATTAAAGGCCGtt < 2:29400/100‑1 (MQ=255) gggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCa > 1:1005526/1‑100 (MQ=255) cGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagc > 2:358691/1‑100 (MQ=255) cGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagc < 2:652529/100‑1 (MQ=255) cgcgcgACAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAACCCGGCGAATGATCCACGCCG‑CCCCGACCACATCAAAGGCCGCCCAagcagc > 2:1042759/1‑100 (MQ=255) gcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGa > 2:1525141/1‑100 (MQ=255) cgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGAt < 2:672834/100‑1 (MQ=255) cgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGAt > 2:1724247/1‑100 (MQ=255) ggCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATc > 2:2908777/1‑100 (MQ=255) ggCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCAGAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGagc > 2:454679/1‑98 (MQ=255) gCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCg < 2:333029/100‑1 (MQ=255) gCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGACCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCg < 2:1675489/100‑1 (MQ=255) ggCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAg < 2:801202/100‑1 (MQ=255) ggCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAg > 1:1967960/1‑100 (MQ=255) gCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCGGCGGATCGTCAg < 2:1907413/99‑1 (MQ=255) gCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAgg < 1:1127092/100‑1 (MQ=255) cACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGc > 1:893844/1‑100 (MQ=255) cACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGc < 1:461695/100‑1 (MQ=255) cACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGc > 1:1102000/1‑100 (MQ=255) tATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGt > 1:222932/1‑100 (MQ=255) aTCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTa < 2:115096/100‑1 (MQ=255) ccGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAg < 1:1249185/100‑1 (MQ=255) cGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAg > 1:2217532/1‑99 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg < 2:2134649/100‑1 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg > 2:2342217/1‑100 (MQ=255) gTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtg > 2:2166095/1‑100 (MQ=255) tGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcc < 2:1298182/100‑1 (MQ=255) tGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcc < 1:872223/100‑1 (MQ=255) gcgcTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAGTTtgcct < 2:2587539/100‑1 (MQ=255) cgcTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctg > 2:735/1‑100 (MQ=255) gcTTCATCAGCCATAATCCGGCGCATGATCCCCGCCG‑CCCCGACGACGTTAAAGGCCGTTCAAGCAGCGTATCGTCAGGCTGTAATCGCAATTtgcctn < 1:510079/99‑2 (MQ=255) ttCGTCAGCCATAATCCGCCGAATTATCCGCGCCG‑GCCCGACGACATTAAAGGCCTTTCAGGCAGCGGATCGTCAGGCTGTAAGCGCAATTTgcctgcct < 1:1640329/100‑1 (MQ=255) tcatcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCtt > 2:2196674/1‑100 (MQ=255) atcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACTACATTAAAGGCCGTTCAAGCAGCGGATCGCCAGGCTGTAAGCGCAATTtgcctg > 1:1085672/1‑94 (MQ=255) tcaGCCATACTCCGGCGAATGATCCACGCCG‑CACCGACGACATTAAAGGCGTTTCAATCAGCGCATCGTCAGTCTGTAAGCGCAATTTGCCTGCCTTGc > 1:1258093/1‑99 (MQ=255) tcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGcc > 1:2159965/1‑100 (MQ=255) caGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCg < 2:12182/100‑1 (MQ=255) aGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGt < 2:193266/100‑1 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg > 1:1600217/1‑100 (MQ=255) ccATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg < 2:453438/100‑1 (MQ=255) cATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc < 1:1015355/100‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 1:2074252/100‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 1:2387021/100‑1 (MQ=255) tAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGa > 2:2104397/1‑100 (MQ=255) agtCCGGCGAATGATCCACGCCG‑CCCCGACGACATGAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAg < 2:166305/98‑1 (MQ=255) aagcaggCGAATGATCCACGCCGCCACC‑ACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAg < 1:1299551/95‑1 (MQ=255) aTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGc < 2:2785696/100‑1 (MQ=255) aTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGc > 2:792769/1‑100 (MQ=255) tCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAGAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCa > 1:223404/1‑100 (MQ=255) ccGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTCCCGTGGCGAGCaa > 1:1711762/1‑100 (MQ=255) ccGGCGAATGAT‑CACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaaa < 1:476476/100‑1 (MQ=255) cGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaa > 2:806475/1‑100 (MQ=255) ggCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAc > 2:666729/1‑100 (MQ=255) gCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcg > 1:674307/1‑100 (MQ=255) gAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgcg > 1:978416/1‑100 (MQ=255) gAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTAAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgcg > 1:1311641/1‑100 (MQ=255) aaTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCgg < 1:1836833/100‑1 (MQ=255) aTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt > 1:1048262/1‑100 (MQ=255) aTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt < 1:2299992/100‑1 (MQ=255) tGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGta < 2:1375609/100‑1 (MQ=255) tGAGCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt < 1:1711515/99‑1 (MQ=255) gATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtat > 2:1153731/1‑100 (MQ=255) aTCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtata > 2:2241583/1‑100 (MQ=255) tCCACGCCG‑CCCCGACGACATTACAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATAc > 2:276685/1‑100 (MQ=255) cACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGACCGCCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATCCGc > 1:1325982/1‑100 (MQ=255) aCGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCt < 2:2381095/100‑1 (MQ=255) cgccg‑cCCCGACGACATTGAAGGCCGTTTAAGCAGCGGATCGGCGGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGTCGAGCAAAGGCGGtatagg > 1:965537/1‑95 (MQ=255) | TGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTG > NC_000913/2645783‑2645977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |