| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,459,293:1 | (G)5→6 | 100% | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 92.4% | 383.6 / 24.8 | 119 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (4/5); new base G (47/61); total (52/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 130 total aligned reads displayed.
GGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGC > NC_000913/3459190‑3459381 | ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑gg‑t‑g < 2:519696/100‑1 (MQ=255) gAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAt‑gg‑t‑gg < 2:2213596/100‑1 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg < 1:2781824/100‑1 (MQ=255) ggCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg‑g < 1:1919987/100‑1 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg < 1:792668/98‑1 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg‑gga < 2:1661033/100‑3 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg‑gga > 1:2284526/1‑98 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑gggg‑gga > 2:2859998/1‑98 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAAtt < 2:2304380/100‑1 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTc > 2:1813208/1‑100 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGCTGCCGTCAT‑GG‑G‑GGGG‑Ggaaa > 1:2476957/1‑96 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTc > 2:1832688/1‑100 (MQ=255) gCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTCGt < 2:397259/100‑1 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGt < 1:1126150/100‑1 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGt < 2:291924/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTg < 2:2563323/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTg < 1:2207558/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTg < 2:1472884/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTg > 2:568762/1‑100 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCTCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGa < 1:40410/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGa > 1:1738496/1‑100 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGa > 1:1737345/1‑100 (MQ=255) cGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATa > 1:2075501/1‑100 (MQ=255) cGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATa > 2:575514/1‑100 (MQ=255) gCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATAc > 2:1635748/1‑100 (MQ=255) cAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACa < 1:534546/100‑1 (MQ=255) cAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACa > 1:1679786/1‑100 (MQ=255) aGGTTAATACCCGTGTGGATATGTCTTTCGCCCGTGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATAc < 1:403040/98‑1 (MQ=255) aGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGAGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATAc < 1:2194126/98‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGa > 1:2807313/1‑100 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGaa < 2:2208699/100‑1 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TCGGGG‑GAAATTCGTGATACAGaa < 1:1690592/100‑1 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAAc > 2:187877/1‑100 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAAc < 2:188815/100‑1 (MQ=255) aTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACcg > 2:776586/1‑100 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACcgc < 2:940720/100‑1 (MQ=255) aCCCGTGTGGATATGTCTTTCGCTCGCGGGCTGCGCGCCATACTTCGCCGGGACCCGGATGTCGACAT‑CG‑TAGGGG‑GAGATTCGTGATACAGAAACagcg > 1:2305273/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCgcgc > 1:1159470/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCgcgc > 2:186600/1‑100 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCa < 2:510531/100‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATAGTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCa < 1:1870763/99‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAg > 2:2500458/1‑100 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAg < 2:113152/100‑1 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTg < 2:1760389/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGc < 2:2284536/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGc < 1:1369451/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGc > 1:2311215/1‑100 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2340209/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2807323/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:2075508/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 2:1924386/100‑1 (MQ=255) tGTCTTTCGCTCGCGGCCTGCGCGCCATAGTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTc < 1:1088787/100‑1 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGCTGTCGTCAT‑GG‑TGGGGG‑GAAATTCCTGATACAGAAACCGCGCAGATTGCGGTTCa > 1:829412/1‑100 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCa < 1:2769484/100‑1 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 1:149377/100‑1 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 2:2765709/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 2:151658/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:1982363/1‑100 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTAGGCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 2:1091686/100‑1 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc > 1:255814/1‑100 (MQ=255) tcgcGGCCTGCGCGCCATACTT‑ACCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTc < 1:1302919/100‑1 (MQ=255) gcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCa > 2:2503/1‑100 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAcc > 2:1381749/1‑100 (MQ=255) gCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCg > 2:169952/1‑100 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc < 2:952677/100‑1 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc < 1:2803946/100‑1 (MQ=255) cgcgcCATACTTCGCCAGGACCCGGATGTCGTCATGGG‑G‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCa < 1:1582038/99‑1 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCt > 2:2601906/1‑100 (MQ=255) ccATACTTCGGCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgg < 1:2356089/100‑1 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa < 2:320193/100‑1 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa < 2:136719/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:255816/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGCCAT‑GGTT‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGGTCAGACCTCGCTCACCGGCCATCTGGTAc > 1:221752/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc < 1:516065/100‑1 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:1901584/1‑100 (MQ=255) ttCGCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 2:154611/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 2:2319611/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaan < 2:808232/100‑2 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac > 1:456156/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:281710/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:935957/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:1906923/100‑1 (MQ=255) ggacgtggATGTTGTCAT‑GG‑T‑GGGGTGAGATTCGTGATACAGAAACCGTGTAGATTTCGGTTCAGCCCTCGCTCACCGGCCATCTGGTACTCTCAacac < 1:1745485/93‑1 (MQ=255) ggACCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGTGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACt < 1:745279/100‑1 (MQ=255) aCCCGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 2:1240657/100‑1 (MQ=255) ccGGGTGTCGTCAT‑GG‑TGGGGG‑GAAAGTCGTGATACAGGACGCGCGCAGATTGCGGTTCAGGCCTCGCTCGCCGGCCATCTGGTACTCTCAACACTCcac < 1:1204805/100‑1 (MQ=255) ccGGATGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac > 1:613017/1‑100 (MQ=255) gATGTCGTCAG‑GG‑TGGGGG‑GAAATGCGTGATACCGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACt < 1:2324382/100‑1 (MQ=255) aTGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTa < 2:2851687/100‑1 (MQ=255) tGTCGTCAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTaa > 2:2416951/1‑100 (MQ=255) gtcgtcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc < 2:646262/100‑1 (MQ=255) tcgtcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACa > 1:2338386/1‑100 (MQ=255) cgtcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg > 1:313081/1‑100 (MQ=255) cgtcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg > 2:1701991/1‑100 (MQ=255) cgtcAT‑GG‑T‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGt > 2:475739/1‑100 (MQ=255) gtcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGt > 1:2101003/1‑100 (MQ=255) tcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg > 1:2176835/1‑100 (MQ=255) tcAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg < 1:2503/100‑1 (MQ=255) cAT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc > 2:2733971/1‑100 (MQ=255) aT‑GG‑TGGGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 1:1684481/99‑1 (MQ=255) | GGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAT‑GG‑T‑GGGG‑GAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGC > NC_000913/3459190‑3459381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |