| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,462,889:1 | (C)9→10 | 100% | intergenic (+243/‑123) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,462,880 | 1 | . | C | 62.0% | 142.8 / 117.8 | 79 | intergenic (+234/‑132) | fadL/yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (11/19); new base C (19/29); total (31/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA > NC_000913/2462783‑2462978 | aaGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cc > 1:233093/1‑100 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccc > 2:2281330/1‑100 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccc > 2:1334995/1‑100 (MQ=255) gCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccc < 2:1312331/100‑1 (MQ=255) ggTATCCACAGTCAACCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc < 2:1886297/100‑1 (MQ=255) tCCACAGATAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGCGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑cccc < 1:1825894/100‑2 (MQ=255) tCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑cctg > 1:2049830/1‑98 (MQ=255) ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccc < 1:2646167/100‑3 (MQ=255) ccACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑cccc > 1:743414/1‑98 (MQ=255) acaGACATACCAGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACATTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGc > 1:1523542/1‑100 (MQ=255) acaGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccctg < 2:495107/100‑5 (MQ=255) caGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑cccctggc < 2:743416/100‑6 (MQ=255) aGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccctggc < 2:979473/100‑7 (MQ=255) aGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccctggc < 2:1982875/100‑7 (MQ=255) gACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTa < 2:391850/100‑1 (MQ=255) cAAACCTGAAGGGAAAGGCATATTTTCGGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccctggct > 2:2238279/1‑91 (MQ=255) aaaCCTGAAGGTAAAGGCATATTTTCATGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATtg < 1:2155136/100‑1 (MQ=255) aaaCCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATtgt < 2:1010643/100‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTgcg < 2:1249586/100‑1 (MQ=255) ccTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTCACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATtg < 1:223341/97‑1 (MQ=255) ccTGAAGGAAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATtgtg < 1:94777/99‑1 (MQ=255) cttaaGGTAAAGGATTATTTTCAGGCGGTTTTGTTTTCTTTTTCAAAGATTTTTCTTTTCTTCATTTTCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGGCTATtgtg < 1:227876/97‑1 (MQ=255) cTGAAGGGAAAGGCATTTTTTCAGGCGTTCTTCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑cccccc‑ccccctggcta < 1:59536/94‑9 (MQ=255) cTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTgc > 1:519221/1‑99 (MQ=255) tGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTccg > 2:1547842/1‑100 (MQ=255) aaGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGGCTATTGTgcgc < 1:870487/100‑1 (MQ=255) aGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTAGTCGGCGCTc > 2:82776/1‑99 (MQ=255) gggAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCa < 2:2414992/100‑1 (MQ=255) gggAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTACTGCATTTCCAGGATA‑CT‑T‑‑‑‑‑CTCCCG‑CCCTGGCGATggtat > 2:2795391/1‑92 (MQ=255) gggAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTACTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCAt > 2:1335059/1‑100 (MQ=255) gAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATac < 1:851590/99‑1 (MQ=255) aaGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACt < 1:1034609/100‑1 (MQ=255) aGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATacac < 1:1938355/100‑1 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTACTGTGCGCTCATacac > 2:2382550/1‑99 (MQ=255) ggCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCa > 2:2531931/1‑100 (MQ=255) cATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCACCC‑CCCTGGCTATTGTGCGCTCATACACTCaaa < 1:1263149/100‑1 (MQ=255) tatTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCCATTGTGCGCTCATCCACTCAAAt > 2:1677086/1‑100 (MQ=255) atTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAAt < 1:2355193/100‑1 (MQ=255) tttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTaaa < 2:2800120/100‑1 (MQ=255) ttCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAg < 2:2820977/100‑1 (MQ=255) tCAGGCGTTCTGCTCTTCCTTCTCAAAGAGTTTACTTTTCTGCATTCCCAGGATACC‑‑C‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAg < 1:1298170/100‑1 (MQ=255) cAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGa < 2:818812/100‑1 (MQ=255) aGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATa < 2:161090/100‑1 (MQ=255) ggCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTTGCTTTTGTTCGCTCATACACTCAATTTAAAgtt > 1:821766/1‑97 (MQ=255) cGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATC‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCCTTTTTCCGCTCCTACCCTCAGATTaaaactcg > 2:1029626/1‑95 (MQ=255) cGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAg < 2:629520/100‑1 (MQ=255) tGCTCGTCCTTCTCAAAAAGTTTATATTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CTGACC‑CCGTGGGTATGGTTCGCTCATTAACTCATATTAAAGATAGGTTCtaa > 1:584950/1‑100 (MQ=255) gCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTCTTGTGCGCTCATACACTCAAACTCAAGGTAGGTTCta > 2:2726430/1‑100 (MQ=255) tCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTTGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaata < 2:767042/100‑1 (MQ=255) cGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TTC‑‑‑CCCCCC‑CCCTGGCTTAGGTTAGCTCATACCCCCAAATTAAAGATAGGTTCtaaa > 2:1072930/1‑99 (MQ=255) gcctttCCCAAAGAGTTTACTTTTCTGAATTCCCAGGATC‑C‑‑CC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataa < 2:169207/96‑1 (MQ=255) gcctgtctcAAAGAGTTTACTTTTCTCCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaata < 2:1689439/95‑1 (MQ=255) tCCTTGTCAAAGAGTTTCCTTTTTTGCATTTCCATGATA‑C‑‑T‑‑‑‑‑CCCCCCTCCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa < 1:2391277/100‑1 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCtaaataaa > 2:2378671/1‑99 (MQ=255) tCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat > 2:56427/1‑100 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTTTCTCTTCTGCGCTCATAAACTCCAATTAAAGATCGGTTCtcaataa > 1:556014/1‑99 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 2:1693035/100‑1 (MQ=255) ccTTCTCAAAGAGTTTACTTTTCTGCAGTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 1:129996/100‑1 (MQ=255) cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTaaataaat < 2:1794684/100‑1 (MQ=255) cTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATg < 2:2235716/100‑1 (MQ=255) tctcAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGc > 2:2855235/1‑100 (MQ=255) tctcAAAGAGTTTACTTTTCTGCATTTCAAGTATA‑C‑‑T‑‑‑‑‑‑ACCCC‑CCCTGGCTATTGTGCCCTCATACACTAAAATTAAAAATAGGTTCTaaacaaataa > 1:1714469/1‑95 (MQ=255) tctcAAAGAGTTTACTTTACTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:1335057/100‑1 (MQ=255) tctcAAAGAGTTTACTTTACTGCATTTCCACGTTC‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAg < 1:2795381/100‑1 (MQ=255) cAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTATCTATTGTGCGATAATACACTCAAATTAAAGTTAGGTTATAAATAAATGAGCg > 1:873516/1‑100 (MQ=255) cAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGAGAGGTTCTAAATAAATGAGCg > 1:2842809/1‑98 (MQ=255) aaGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGACTATTGTGCGCTCATACAACCAAATTAAAGGTAGGCTCTAAAAAAATGAGCGt > 2:2057684/1‑100 (MQ=255) gagTTTACTTTCCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 2:112633/100‑1 (MQ=255) agTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttttt < 2:75470/100‑1 (MQ=255) gTTTACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGttttt < 1:2126208/99‑1 (MQ=255) ttACTTTTCTGTTTTTCCCGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:2361807/98‑1 (MQ=255) ttACTTTTCTGCCTTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:542278/97‑1 (MQ=255) taattttCTGCATTTCCATGATT‑CTTT‑‑‑‑‑CCTCCA‑TCCTGTTTATTGTGCGTTCATACACTTTAATTAAAGATATGTTCTAAATAAATGAGCGTTTTTTGAt < 1:897055/97‑1 (MQ=255) tACTTTTTTGCATTTCCAGGATA‑C‑‑TCCCCCCCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGtttttt < 1:1406367/100‑1 (MQ=255) tACTTTTCTGCATTTCCAGGATT‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt < 2:556015/100‑1 (MQ=255) tACTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCGGGCTATTTTTCGCTCTTACACCTAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGAt > 2:425487/1‑100 (MQ=255) cTTTTCTGCATTTCCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGGCTATTTTGCGCTCATACCATCAAATTAAAGATAGGTTCTAAATAAATGAGCCTTTTTTTAt > 2:2200270/1‑99 (MQ=255) cTTTTCTGCATTTCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACCCTCAAATTAAAGATAGGCTCTAAATAAATGAGCGTTTTTTGATAg > 2:681540/1‑100 (MQ=255) cTTTTCTGCATTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGt > 1:1683886/1‑100 (MQ=255) ttttCTGCATTTCGAGGATA‑C‑‑T‑‑‑‑‑CCCCTC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 1:1701310/97‑1 (MQ=255) ttttCTGCATTTCCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAg < 2:2213913/100‑1 (MQ=255) tttCTGCCTTTCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTTTTGTTCTCTCATAAACTCAAATAAAAGAGCGGTTCTACATAAATGAGCGTTTTTTGATa > 1:778365/1‑96 (MQ=255) tttCTGCATTTCCCGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATa < 2:1378662/98‑1 (MQ=255) cTGCATTTCCAGGATA‑C‑‑TCCC‑‑CCCCCC‑CCCTGCCTCTTTTTCCCTCATCCACCCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCt > 1:2010922/1‑99 (MQ=255) cTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑‑CCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTc > 1:1702169/1‑100 (MQ=255) gtaTTTCCATGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTAttt < 1:686423/98‑1 (MQ=255) cATTTCCAGGATC‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTc < 2:2525186/100‑1 (MQ=255) tCCAGGATA‑C‑‑TCC‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTa < 2:2378036/100‑1 (MQ=255) tCCAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAg < 2:378521/100‑1 (MQ=255) tCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 2:521511/100‑1 (MQ=255) tCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 2:1422716/100‑1 (MQ=255) ccAGGATA‑C‑‑TC‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTTgg > 2:2299406/1‑100 (MQ=255) aGGATG‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAgg < 1:2074052/97‑1 (MQ=255) c‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAatatata > 1:700362/1‑100 (MQ=255) | AAGCGGTATCCACAGACAAACCTGAAGGGAAAGGCATATTTTCAGGCGTTCTGCTCGTCCTTCTCAAAGAGTTTACTTTTCTGCATTTCCAGGATA‑C‑‑T‑‑‑‑‑CCCCCC‑CCCTGGCTATTGTGCGCTCATACACTCAAATTAAAGATAGGTTCTAAATAAATGAGCGTTTTTTGATAGTCTATTTCATTAGGTAATATATA > NC_000913/2462783‑2462978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |