| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,765,794:1 | (C)7→8 | 100% | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 87.1% | 275.7 / 36.5 | 93 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (8/4); new base C (36/43); total (45/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATT > NC_000913/2765688‑2765880 | ttGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑g < 2:1028206/100‑1 (MQ=255)ttGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑g < 1:332756/100‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑g < 1:2846418/99‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c < 2:1950256/100‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c > 2:2683485/1‑100 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c < 2:1493482/100‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c > 2:664965/1‑100 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCACCCATTTTGTGGACT‑g > 2:1291986/1‑99 (MQ=255) gTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑c > 2:2293542/1‑100 (MQ=255) tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc < 2:803182/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACCTCATCCCCCATTCTGTGGACT‑G‑‑c‑cc > 1:1903767/1‑99 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑c < 2:243200/100‑1 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑cc < 1:829608/100‑1 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑cc < 1:1335638/100‑1 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑cccc < 2:424247/100‑2 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGCTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑ccccggt < 2:1930585/100‑5 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑ccccggta < 2:1217608/100‑6 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑ccccggta < 1:1771385/100‑6 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑ccccggt < 2:1922021/99‑5 (MQ=255) aataatTACTAAATATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAg < 1:2474666/100‑1 (MQ=255) ataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGa < 1:2346787/100‑1 (MQ=255) taattaatAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGAc < 2:2428226/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGAc < 1:2560590/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGAc < 2:71566/100‑1 (MQ=255) aatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑c‑cc‑c‑cccccggtagac < 2:2805868/100‑10 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCTCCATATTATGCACT‑G‑‑C‑CCTA‑CCCGGTAg > 2:1622693/1‑96 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACg > 1:2003326/1‑99 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTGTGTGGACT‑G‑‑CGCC‑C‑CCCGGTAGACGa > 1:871425/1‑100 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGa > 1:1989975/1‑99 (MQ=255) tACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATc < 2:1241187/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATcc > 1:1509094/1‑100 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGccc < 2:1405909/100‑1 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCtat < 1:1166637/100‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATACTGCCCta > 2:1462035/1‑100 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAg < 1:1211759/100‑1 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GA‑C‑CC‑C‑CCCGGTCGACGATCCTGCCCTCTAg > 1:658572/1‑100 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGtt < 1:1877067/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTgg < 2:393190/100‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTg < 2:2640863/99‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGa < 1:2173835/100‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATACCCCATTTTGTGGACTAC‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCACTATAGTTg > 2:2318108/1‑98 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAGTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACCATCCTGCCCTATAGTTGGAg > 2:794440/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATGATACCCAATTTTGTGGACT‑G‑‑C‑CCAC‑CCCGGTAGACGATCCTGCCCTATAGTGTGAGTg > 1:996972/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGCCT‑G‑‑C‑CC‑CGCCCTGAAGACGATCCTGCCCTCTAGTTGGGGTg > 2:1853978/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTg > 2:1284832/1‑100 (MQ=255) ctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGc > 2:100949/1‑100 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGTACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccc < 1:1002347/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccc < 2:2160879/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccc > 1:2594421/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGcccc < 2:2358888/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:299234/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:2789775/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc > 2:306334/1‑99 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCt > 2:2245057/1‑100 (MQ=255) gagaTCAGGAAGAGGTTACCGAAACGGTGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:2080063/99‑1 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTTTGGACT‑GC‑C‑CC‑C‑CCCGTTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTa < 1:266906/98‑1 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt > 2:1205259/1‑100 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAt > 1:1590412/1‑99 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTAAAGTTGAAGTGCCCACTATTCaa > 2:839706/1‑99 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 1:1623948/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 1:908002/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 2:1057869/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 1:887107/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 2:650851/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg > 1:2811409/1‑100 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:1867795/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 2:164546/100‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 1:1014039/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCACCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc > 2:942141/1‑100 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:587638/100‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGCTAGACGATCCTGCCCTATATCTGGAGCGCCCACGATTcgcgtgtcca > 1:1104346/1‑90 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTTCCCTATAGTTGGAGCGCCCCCTATTCAGGTGGCTaa > 1:1220349/1‑100 (MQ=255) ttACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTCTTCCGGTGGCCAAAt > 2:2113725/1‑100 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAttt > 1:1102755/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 2:1273025/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 1:1716421/100‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 2:2594432/100‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt > 2:1341920/1‑100 (MQ=255) aTGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc < 1:2549408/100‑1 (MQ=255) aTGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCa > 2:2244212/1‑100 (MQ=255) tGGACATCATCCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCa < 2:593685/100‑1 (MQ=255) tGGACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa > 1:1070299/1‑100 (MQ=255) ggACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCACCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:857897/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAAGTGGCTACATTTAGCAAATCAATa > 1:1104151/1‑100 (MQ=255) gACATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCCGTAGACGCACCTGCCCTACAGTTGGAGTGCCCCCTATTCAGCTGGCCAAATCCTGCAAATCagt > 1:235850/1‑97 (MQ=255) aCATCATCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 1:1888527/100‑1 (MQ=255) catcatCCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGTAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca > 1:1295409/1‑100 (MQ=255) atcatcCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATacac < 2:2518852/100‑1 (MQ=255) tcatcCCCCATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCGATTCAGGTGGCTAAATTTAGCAAATCAATacac > 1:1528240/1‑99 (MQ=255) catcCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATacac < 1:428328/99‑1 (MQ=255) atcCCCCATTTTGTGGACT‑GCCC‑CC‑C‑CCCGGTAGACGCTCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACtt > 1:1063329/1‑100 (MQ=255) cccccATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:1030455/1‑100 (MQ=255) cccccATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:2846918/1‑100 (MQ=255) ccccATTTTGTGGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTGGGAGTGCCCCCGATTCAGGTGGCTAGATTTAGCAAATCAATACACGTCAg > 2:858937/1‑99 (MQ=255) gtgGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta < 1:457020/100‑1 (MQ=255) gtgGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta > 1:662813/1‑100 (MQ=255) tgGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtattat < 2:2003333/100‑1 (MQ=255) tgGACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtattat > 1:927464/1‑100 (MQ=255) tgGACT‑GA‑C‑CC‑C‑ACCGGTAGACGATCCTGCCCTACAGTTGGGGTGCACCCTATTCAGGTGGCTAAATTTAGCAAATCAATACTCTTCAGGGGGGtat < 1:935655/97‑1 (MQ=255) ggACT‑GC‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:889616/1‑100 (MQ=255) | TTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑‑C‑CC‑C‑CCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATT > NC_000913/2765688‑2765880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |