| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 95.9% | 316.6 / 5.7 | 98 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base T (54/40); total (55/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809668‑2809861 | ggATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCg > 1:1342382/1‑100 (MQ=255) gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t < 2:1470569/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt < 2:1071709/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt < 2:2270924/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttt < 2:159625/100‑1 (MQ=255) aGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑tttt > 1:2906090/1‑99 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttc < 1:1676300/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttc > 1:1644063/1‑98 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttc < 2:155734/100‑3 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttct < 1:1162071/100‑4 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttctc < 2:1682606/100‑5 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttct > 1:1165435/1‑96 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttctcc < 1:1467397/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑tttt‑ttttctcc < 2:1092981/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCt > 1:2459088/1‑100 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCt > 2:201873/1‑100 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGc < 2:2808521/100‑1 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTTCTGcat > 1:1227839/1‑100 (MQ=255) ncGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACTCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGcatc > 1:1640829/2‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGCTTCTCTGCTCTCGAAAGCGT‑TTTT‑TTTCTCGTTcatcat > 1:2826447/1‑100 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTa < 1:2784107/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTAGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTa < 2:805258/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCAttt > 1:2014148/1‑98 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTAt > 2:1704730/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGc > 1:763564/1‑100 (MQ=255) attaGTTATATTCCAGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGc < 2:1883522/99‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCa > 1:677441/1‑98 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgc > 1:1392401/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgc > 2:2089950/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgcg < 1:1925832/100‑1 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgcg > 1:1625254/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGgcg > 1:793818/1‑100 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGcgcg < 1:1787617/100‑1 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAg < 2:763566/100‑1 (MQ=255) tatTCAGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAg > 1:206045/1‑99 (MQ=255) atTGCGGTGGCCTTTGCCTTGGGTCTGGATGCGACCCGTCTGGGATTGCCTCCCCTCCAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAg < 2:1199972/99‑1 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATAAATGATGCAggagaaaaa < 2:1354378/100‑8 (MQ=37) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCCTTTATGCAGGCGCGAGc > 2:2710981/1‑99 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGcc > 2:1649528/1‑100 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 2:771056/100‑1 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt > 2:301639/1‑100 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt > 2:569443/1‑99 (MQ=255) gTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTc > 2:261629/1‑100 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:721927/100‑1 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt > 1:111580/1‑100 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 2:2005649/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc > 2:1597132/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCTTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:1885771/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:1052905/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:2787440/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:2780928/1‑100 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:1655427/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt < 1:1432900/100‑1 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc > 1:1866600/1‑99 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 2:1120587/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:997159/100‑1 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg > 2:2815117/1‑100 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 2:1655432/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg < 2:2544871/100‑1 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 2:1925960/1‑100 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGc > 2:264787/1‑100 (MQ=255) cTGAATGCGTCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 1:2814705/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTTTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt > 2:882739/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTTTTGTTTTTCATCTATAAATGCGCGCGCCAGTTCGTCATTCCCTGGatgatg > 1:1053315/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:111581/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:1461962/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:731740/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 1:2476483/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:1273364/100‑1 (MQ=255) aaTGCGACCCGTCTGGGTTTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:1518478/99‑1 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc > 2:466990/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc > 1:2052761/1‑99 (MQ=255) naCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 1:753785/2‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 1:1640231/1‑100 (MQ=255) atctgTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1536972/96‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:2232045/100‑1 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag > 1:296990/1‑100 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 1:2539590/100‑1 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagat > 2:1536976/1‑98 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATAATTTATGCAGGCGCGCGCCAGTTCGTAATTACCGCGATGCTGGCATCCGGGggtag > 1:2686099/1‑98 (MQ=255) gggATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCTAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 1:425577/1‑100 (MQ=255) gggATTCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 1:2516277/1‑100 (MQ=255) ggAGTCTCTCCGCGCGAAAGCG‑‑TTTTGTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAATTCGTCGTTAGCGCGATGCTGGCAGCGGGGAGTAGtt < 1:1551191/98‑1 (MQ=255) gATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:619868/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:1826889/100‑1 (MQ=255) tctctcCTCTCGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGa > 2:333413/1‑100 (MQ=255) ctctcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 2:1082347/1‑100 (MQ=255) ctctcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 2:51399/1‑100 (MQ=255) tctcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt > 2:1839910/1‑100 (MQ=255) tcctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGATTGTGGATtgc > 2:2521691/1‑100 (MQ=255) cctctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct < 2:1274831/100‑1 (MQ=255) tctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGTCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:1827565/1‑100 (MQ=255) tctcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 2:1216345/1‑100 (MQ=255) tcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc > 2:47496/1‑100 (MQ=255) tcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:2388061/100‑1 (MQ=255) tcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc > 1:1253712/1‑100 (MQ=255) tcGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCACGCGCGAGCCAGTTCGTCATTCCCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc > 1:849804/1‑100 (MQ=255) cGAAAGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTAGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 1:2331569/1‑100 (MQ=255) aaGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:261627/100‑1 (MQ=255) aaGCGT‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc > 2:736802/1‑100 (MQ=255) | GGATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑TTTT‑TTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809668‑2809861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |