| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 92.6% | 309.8 / 17.2 | 95 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (3/4); new base C (50/38); total (53/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑g > 1:130643/1‑100 (MQ=255)cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑g > 1:130332/1‑100 (MQ=255) aTCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑c > 2:1871825/1‑100 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc > 2:2457838/1‑100 (MQ=255) ggACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑cccc < 2:146270/100‑1 (MQ=255) ggACCTTTTATTGTGCAAAGAAAAGGCCAGCCTCGCGTGAGACTGGCCTATCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGATATTCA‑G‑cccc > 1:1396499/1‑100 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccccctgc < 2:1690253/100‑5 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTAGCGGAACAGGGCTTCGATATTCA‑G‑ccccctgc > 1:2344456/1‑96 (MQ=255) ttttATTTTTTACATAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccccctgc > 1:999536/1‑95 (MQ=255) tATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGttt > 1:2201692/1‑100 (MQ=255) nttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTAGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGt > 1:1272561/2‑97 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCa > 2:375543/1‑100 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCa < 1:1817946/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCaa > 2:1817953/1‑99 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg > 1:1352059/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAg < 2:1478492/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAgg > 2:626827/1‑100 (MQ=255) cacaGAAGAGTCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCG‑GCCCCCTGCGTTTGCAGGAt > 1:2430270/1‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTGCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAt < 1:559147/100‑1 (MQ=255) caGAGAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAttt > 2:28152/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAttt > 2:1422777/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAttt < 2:1112238/100‑1 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGAttt < 1:860421/100‑1 (MQ=255) aGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTc > 2:768988/1‑100 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcgc < 2:1357530/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcgcg < 1:1814732/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcgcg < 2:798198/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTcgc < 1:445343/99‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCgcgc < 1:375541/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCa < 1:1208355/100‑1 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCa > 2:2902948/1‑100 (MQ=255) aGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCa > 2:2895863/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCaa > 1:1793179/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCaa > 2:1890135/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGAAATTCA‑GCCCCCTGCGTTTGCAGGATCTCGCGCa > 1:477093/1‑99 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTGCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACgg < 1:1727536/97‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt > 1:188817/1‑100 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCTGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:1190893/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 2:515727/1‑100 (MQ=255) gcTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 1:1481446/99‑1 (MQ=255) ggccttttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc > 2:487446/6‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:2247189/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:1475338/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:1874993/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCTGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:2684384/100‑1 (MQ=255) cTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:121080/100‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 2:1759768/100‑1 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCt > 1:502228/1‑99 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:2406206/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGAGAGTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 1:953720/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 2:1833941/1‑100 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 1:683392/1‑100 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:2612326/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTACAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:2555963/100‑1 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGatgattgtcaa > 1:1074554/1‑90 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 2:347009/100‑1 (MQ=255) aTGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAaca < 1:640316/100‑1 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAacac > 1:2527706/1‑100 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 2:279292/100‑1 (MQ=255) cttacttaCTCGCGTAACATCGCTTCGATATTCATC‑CCCCTTCTTTTGCATGATTTCGCGCAAACGGCGCAGTCCTTCAACCTGAATCTGGCGAACACg < 1:2534017/99‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt > 1:2235662/1‑100 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt < 2:2297983/100‑1 (MQ=255) cttactccCTGGCGGAACAGCGCGTCCACATGCATC‑CCCCTACGTTTGTAGCGCCCCGCACAAACGGCGCAGGCCTTCTACCTCAATCTTACGAacac > 1:1102605/1‑98 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc < 2:1942920/100‑1 (MQ=255) acttactCGCTGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa < 2:1190895/100‑1 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa < 1:1078710/100‑1 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa > 1:2122078/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc < 1:42186/100‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:1691938/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 1:2436664/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTGACGGGTg > 2:2684130/1‑99 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:519642/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1187116/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2859132/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:2450263/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCCCTGTGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:1290413/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:1228313/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg > 2:2553939/1‑100 (MQ=255) ggAACAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:2374890/100‑1 (MQ=255) aCAGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa > 1:2142174/1‑100 (MQ=255) aCAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt > 2:1757105/1‑100 (MQ=255) aGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGGACACGTTCACGGGTGAGGCCAAtt > 2:1995736/1‑100 (MQ=255) aGCGCTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:2132071/1‑100 (MQ=255) gcgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 1:2456015/1‑100 (MQ=255) gcgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt < 1:1213582/100‑1 (MQ=255) gcgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAttt > 2:916877/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 2:345226/1‑100 (MQ=255) tcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:322174/99‑1 (MQ=255) gcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGTCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 1:872797/1‑99 (MQ=255) gcTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:889868/100‑1 (MQ=255) cTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:2800804/1‑100 (MQ=255) cTTCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:2357603/1‑100 (MQ=255) cTTCGATATTCA‑GCCCCCTGCGTTAGCAGGATTTCGCGCAAACGGCGCACGCCTTCAACCTGAATCTGGCGAACACGTTCCCGGGTGAGCCCAATTTCAc > 1:1332459/1‑100 (MQ=255) ttCGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg > 2:1866044/1‑100 (MQ=255) cGATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 2:1375971/100‑1 (MQ=255) gATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 2:2395531/100‑1 (MQ=255) gATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:1491480/1‑100 (MQ=255) gATATTCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 2:888061/1‑100 (MQ=255) ttCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:2461675/1‑100 (MQ=255) ttCA‑GCCCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:2344467/100‑1 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |