| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2950597 | NA (NA) | 7 (0.080) | 5/158 | NT | NA | intergenic (+24/+38) | argA/recD | amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain |
| ? | NC_000913 | = 2950614 | NA (NA) | noncoding (2/14 nt) | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2950490‑2950597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcgacGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTTT < NC_000913/2950614‑2950516 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 2:728193/100‑1GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCG < 2:2514123/100‑1GATATTGATTTACGGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAAGCGTCG < 1:2260877/100‑1 TATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGA > 1:1720730/1‑100 TATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGA > 2:1804194/1‑100 TATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGG > 1:42963/1‑99 ATTGATTTACTGAAAAAAAGAAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGAT < 1:2585400/100‑1 TTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATG > 1:2813001/1‑100 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGCTGGCGGATTTAGGGTAATCGATGAAAATTGTCTGAT > 2:1003761/1‑97 GATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCG < 2:482344/100‑1 ATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCTTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGA < 2:1248723/100‑1 ATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGA > 2:1992049/1‑100 TTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC < 2:325820/100‑1 CTGCCCGAGAGCAAAAAGCAGTTGTACAACCACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGCTGCGACGTAC > 1:1910929/1‑100 TGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCGTGTCGCATCC < 1:1900369/100‑1 TGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCC < 2:1910937/100‑1 ACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGAC < 1:2211635/100‑1 ACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGAC < 1:1879402/100‑1 ACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTT > 2:1038219/1‑100 AGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCAT < 1:1038217/100‑1 CGGATTTAGGGTAAGCGATGAAAATCGCCGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAA > 2:358049/1‑100 CGGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTAC > 2:408889/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACA > 1:444602/1‑100 GGATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACA < 1:738160/100‑1 ATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAAC < 2:1931501/100‑1 ATGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAAC < 2:2515479/100‑1 TGCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACT > 2:1804780/1‑100 GCGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTG < 1:590765/100‑1 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGC > 1:1136497/1‑100 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGC > 2:2773030/1‑100 CGACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGC > 1:2801656/1‑100 GACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCT > 2:727453/1‑100 ACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTT > 1:1941074/1‑100 ACGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTT < 1:2803394/100‑1 CGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTTT > 2:1266772/1‑100 GATATTGATTTACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2950490‑2950597‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggatgcgacGTACGAGTGTTACGCATGTCGCATCCGACGATTTTCATCGCTTACCCTAAATCCGCCATCAACACTTTGGATTTACGCTGGTAGTTGTACAACTGCTTT < NC_000913/2950614‑2950516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |