| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 380,020 | (G)10→7 | 27.8% | intergenic (‑139/+47) | frmR ← / ← yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 380016 = | 75 (0.720) | 26 (0.270) | 23/164 | NT | 27.8% | intergenic (‑135/+53) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein |
| ? | NC_000913 | = 380012 | 66 (0.690) | intergenic (‑131/+57) | frmR/yaiO | regulator protein that represses frmRAB operon/outer membrane protein | |||||
CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/380121‑380016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT < NC_000913/380012‑379915 CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGCTTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑C > 1:1060864/1‑100CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑C < 2:1323035/100‑1 GATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCC > 2:2078713/1‑100 GATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCC > 1:598450/1‑100 GATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCC > 1:2482343/1‑100 ATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC < 2:106726/100‑1 gACGGGCTGCAAGTTGCAGACCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCC > 1:2267450/2‑100 AACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCC < 1:1977108/100‑1 CGGGCTGCAAGTTGCAGACCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTC > 1:1580961/1‑100 GTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTT < 1:1136842/100‑1 CTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTT < 2:83634/100‑1 TTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCG > 2:2438914/1‑100 CAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGAC < 1:2097397/100‑1 AGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACC > 2:2456911/1‑100 AGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACC > 2:2456036/1‑100 CCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGA < 2:2456584/100‑1 TGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTGGTCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTT > 1:2212880/1‑98 GATTCCTTCTGCCACCCGCTATCCGGGGCGGCCTTCCCAGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATT > 1:1792971/1‑100 CCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCA < 1:640554/100‑1 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATA > 1:393069/1‑100 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATA < 1:34335/100‑1 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATA < 1:2536029/100‑1 GCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATAT < 2:1421055/100‑1 CCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATAC > 2:2216635/1‑100 CTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTAT > 2:1788135/1‑100 CCGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGG > 2:2159945/1‑100 CGGGGCGGCCTTCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGG > 1:2883005/1‑100 GGCCTTCCCTTCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCTGTGTTATATACTATAGGGGGGTA < 1:552717/98‑1 CCTTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCCCCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCA > 1:153359/1‑100 TTCCCTGCCGATTAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCA < 1:70128/98‑1 TCCCTGCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATT < 1:1047195/100‑1 CCCTTCCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTG < 2:2309552/100‑1 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATA < 1:1163160/100‑1 CCGATTAGCCCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATA < 1:1615777/100‑1 TAG‑CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAAT < 1:1047658/100‑1 gCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACC > 2:2790333/2‑100 CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACC < 1:375003/100‑1 CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACC > 2:824238/1‑100 CCCCCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACC > 2:824239/1‑100 CCCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCC > 2:2237153/1‑100 CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC < 2:1562815/100‑1 CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC < 2:106532/100‑1 CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC < 1:2757409/100‑1 CCCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCC < 2:769296/100‑1 CCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT > 1:1238059/1‑100 CCTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT > 1:2232989/1‑100 CCGATGATTTTAACGGTCTGCAACTTGCAGCCCGTCTGACCTGGAAATTCTGATTCCTTCTGCCGCCCGCTATCCGGGGCGGCCTTCCCTGCCGATTAG‑CCCCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/380121‑380016‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccccccTTTCCTCTTTGTTTTCCGACCACATTCACCGGATAAATTTTATTCTCCAGTGTTATATACTATAGGGGGGTATGCATTGACATATAGAATACCCCCCT < NC_000913/380012‑379915 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |