New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	497914 =	NA (NA)	7 (0.070)	5/166	NT	NA	intergenic (+95/‑141)	adk/hemH	adenylate kinase/ferrochelatase
	?	NC_000913	497936 =	NA (NA)					intergenic (+117/‑119)	adk/hemH	adenylate kinase/ferrochelatase

GCGGAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/498017‑497914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAAGT  >  NC_000913/497936‑498034                                                                                                                                                                                                              GCGGAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCG                                                                                                         <  1:1110718/100‑1   GGAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGC                                                                                                       >  1:317111/1‑100   GGAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGC                                                                                                       >  2:2643666/1‑100    GAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGCC                                                                                                      <  2:1589394/100‑1                AGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGGAT‑ATTCATTCGGCCTTTTACAAAAAC                                                                                          <  1:271819/100‑1                                                GAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGA                                                          >  2:796715/1‑100                                                                           TTTGTAAAAGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCCATTAGTTCTTCTTCC                               >  1:1410347/1‑100                                                                               TAAAAGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAACGTCAATCTGCGCTATTCCTATTTCTGATTTGACCTCTCACACCAATTACTTCTTCTTCCTCAC                           >  1:1556003/1‑100                                                                               TAAAAGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCAC                           >  1:416381/1‑100                                                                               TAAAAGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAAACTCAATCTGCGCTATTCCTTATTCTGATTTGAACTCTCACAGCAATTAGTTCTTCTTCCTCAC                           >  1:847699/1‑100                                                                                   AGGCCGAATGAAT‑ATCCGGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTT                       >  2:2246128/1‑100                                                                                                  ttcgttCTTTTACACAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATC         <  1:432501/94‑1                                                                                                     GGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGTTTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAAC      >  2:248203/1‑100                                                                                                     GGCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAAC      <  2:1610911/100‑1                                                                                                      gtCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACA     <  1:2646235/98‑1                                                                                                      GCCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACA     <  2:885510/100‑1                                                                                                       CCTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAA    <  2:592027/100‑1                                                                                                        CTTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAAG   >  1:468678/1‑100                                                                                                         TTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAAGT  >  2:711567/1‑100                                                                                                                                                                                                              GCGGAAAAGTGAGGAAGAAGAACTAATTGCTGTGAGAGGTCAAATCAGAAAAAGGAATAGCGCAGATTGAGGTTTTTGTAAAAGGCCGAATGAAT‑ATCCGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/498017‑497914 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctTTTACAAAAACCTCAATCTGCGCTATTCCTTTTTCTGATTTGACCTCTCACAGCAATTAGTTCTTCTTCCTCACTTTTCCGCTACAATTATCAACAAGT  >  NC_000913/497936‑498034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.