| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 792268 = | NA (NA) | 11 (0.120) | 6/164 | NT | NA | noncoding (5/34 nt) | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP71 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 792298 = | NA (NA) | intergenic (‑243/+18) | galE/modF | UDP‑galactose‑4‑epimerase/molybdate ABC transporter ATPase | |||||
TGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/792370‑792268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG > NC_000913/792298‑792395 TGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCC > 2:2703686/1‑100TGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCC < 2:1886664/100‑1TGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCC > 2:1340553/1‑100 GTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGC > 2:39433/1‑100 TCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTCGTGCTGCCCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGC > 1:2761389/1‑98 CTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGACGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACGCCCGGCCCAACATATTCTTGTC > 1:2799921/1‑100 GACCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGAATCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGC > 1:1030973/1‑100 ACCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGCCGCCATATCGTTTTGCCAGCACATAGCGATAGAGTCCACCGTCCGGC > 1:1188772/1‑99 CCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCACTATATTTTTGTCAGCACATAGCGATAGCGTCCACCGTCCGGCA > 1:754738/1‑99 CCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAC > 2:614740/1‑100 CCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAC > 2:2561927/1‑100 CCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCAC > 2:1778959/1‑100 CTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACG > 2:2231050/1‑100 CTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACG > 2:499308/1‑100 CTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACG > 1:127568/1‑100 TGCCGGAGGCGGCCTTAGCACCCTCTCCGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAA > 1:2370406/1‑100 CTCCGGCAAGGTCAGCACTACCGGCTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGC < 2:2704709/100‑1 CGGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGG < 2:387342/100‑1 GGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGC > 1:2478279/1‑100 GGCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAG < 1:357874/98‑1 GCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG < 2:1452697/100‑1 GCAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG < 2:1323785/100‑1 TGAGTTCGTGCCGGACGGTGGACTCTATCGCTATGTGCTGACAAAAATATATTGAGTCGGTAGTGCTGACCTTGCCGGAGGCGGCCTTAGCACCCTCTCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/792370‑792268‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccggcAAGGTCAGCACTACCGACTCAATATATTTTTGTCAGCACATAGCGATAGAGTCCACCGTCCGGCACGAACTCAAGACGATGGGTAATACAGGCAGGCG > NC_000913/792298‑792395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |