New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 126981883 (0.800)14 (0.150) 6/162 NT 15.1% intergenic (‑8/+420) ldrB/ldrC toxic polypeptide, small/toxic polypeptide, small
?NC_000913 = 1269840 82 (0.870)intergenic (‑30/+398) ldrB/ldrC toxic polypeptide, small/toxic polypeptide, small

ACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1269715‑1269818
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atagccgcAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTAT  <  NC_000913/1269840‑1269743
                                                                                                                                                                                                          
ACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAG                                                                                                        >  1:326933/1‑100
 CGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                       >  2:1622342/1‑100
 CGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                       >  2:181980/1‑100
 CGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGC                                                                                                       >  2:2390039/1‑100
   CCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                     >  2:1769989/1‑100
   CCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCC                                                                                                      >  1:1120336/1‑99
   CCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGGCGTGCCAGACAGTCATGGCAAACTGCGCGAGCGTCATATAGCCG                                                                                                     >  2:883031/1‑100
                   GCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTA                                                                                     <  2:1770655/100‑1
                                TTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCT                                                                        <  2:1860445/100‑1
                                 TCCCGCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTA                                                                       <  2:1134686/100‑1
                                     gaCAGGATCGGTGCTGCCAGGTCGTGCCAGAAACTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATAT                                                                    <  1:1533404/97‑1
                                     GCCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATG                                                                   <  1:376449/100‑1
                                      CCATGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATG                                                                   <  2:512237/99‑1
                                      CCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGA                                                                  <  2:2732081/100‑1
                                      CCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGA                                                                  <  1:779626/100‑1
                                      CCAGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGA                                                                  <  2:378998/100‑1
                                       CAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGAC                                                                 <  1:1966631/100‑1
                                        AGGATCGGTGCTGCCAGGTCGTGCCAGAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACG                                                                <  1:283477/100‑1
                                        AGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTTTATGACG                                                                <  2:1523042/100‑1
                                                                 AGACAGTCATGGCAAACTGCGCGAGCGTCATATCGCCGCAACGTGCTGTCATTACAACAAGGCTGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCT                                       <  1:875537/100‑1
                                                                  GAAAATCATGGCAAACTGCGCGAGCGTCATATAGCCGCAAAATCTTTTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGATTTTCTn                                      <  2:133112/100‑2
                                                                                                ATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGG        >  2:1525209/1‑100
                                                                                                ATAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGG        >  2:1651046/1‑100
                                                                                                 TAGCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGA       <  2:1298977/100‑1
                                                                                                   GCCGCAAAGTGTTGTCATTACAACAAGGCGGCTATAGGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGACACCGATCCTGGCGGGAA      <  1:1195229/99‑1
                                                                                                   GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAAT     <  2:1096633/100‑1
                                                                                                   GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAAT     >  2:2148454/1‑100
                                                                                                   GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAAT     >  2:2396813/1‑100
                                                                                                   GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAAT     <  1:400274/100‑1
                                                                                                   GCCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAAT     >  1:1777586/1‑100
                                                                                                    CCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATT    <  1:2298999/100‑1
                                                                                                    CCGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATT    <  1:1601305/100‑1
                                                                                                     CGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGCATTA   >  2:1771356/1‑100
                                                                                                     CGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGACTTA   >  2:2815208/1‑100
                                                                                                     CGCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTA   >  1:855565/1‑100
                                                                                                     CGCAAAATGTTGTCATTACAAAAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCATGGCGGGAATTA   >  2:402999/1‑100
                                                                                                      GCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTAT  >  2:1543642/1‑100
                                                                                                      GCAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTA   >  2:902622/1‑99
                                                                                                                                                                                                          
ACGCCACCAGCCGACAATCGCTGCGGTAATAATTCCCGCCAGGATCGGTGCCGCCAGGTCGTGCCAGAAAGTCATGGCAAACTGCGCGAGCGTCATATAGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1269715‑1269818
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atagccgcAAAATGTTGTCATTACAACAAGGCGGCTATATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCGGCACCGATCCTGGCGGGAATTAT  <  NC_000913/1269840‑1269743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.