New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2837464NA (NA)6 (0.060) 4/162 NT NA intergenic (‑39/+114) hypF/hydN carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein/formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit
?NC_000913 = 2837491 NA (NA)noncoding (27/27 nt) REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences REP196 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 129 total aligned reads displayed.

GACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACA  >  NC_000913/2837366‑2837563
                                                                                                  |                                                                                                   
  cGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgcc                                                                                                  >  2:294203‑M1/1‑97 (MQ=255)
   gCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccg                                                                                                 <  1:1254522‑M1/100‑5 (MQ=255)
   gCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccg                                                                                                 <  2:1254587‑M1/100‑5 (MQ=255)
   gCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccg                                                                                                 <  1:1728235‑M1/100‑5 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCTTTGTGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgg                                                                                                >  1:178426‑M1/1‑95 (MQ=255)
    cccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTGTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgg                                                                                                <  1:336382‑M1/100‑6 (MQ=255)
     ccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgga                                                                                               <  1:257974‑M1/100‑7 (MQ=255)
     ccTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccgga                                                                                               >  2:1444757‑M1/1‑94 (MQ=255)
      cTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTTCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGac                                                                                              >  1:2907521/1‑100 (MQ=255)
          aCTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGa                                                                                          >  1:200096/1‑100 (MQ=255)
           cTTTGCCACAACTACGCAGTAGCACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGAc                                                                                         <  1:2510093/100‑1 (MQ=255)
             ttGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAg                                                                                       <  1:841202/100‑1 (MQ=255)
               gCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCg                                                                                     >  2:2185914/1‑100 (MQ=255)
                 cACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTc                                                                                   >  2:1201931/1‑100 (MQ=255)
                 cACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTc                                                                                   >  2:927620/1‑100 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  2:69959/100‑1 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  1:1205416/100‑1 (MQ=255)
                  aCGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCg                                                                                  <  2:321884/100‑1 (MQ=255)
                    gAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCa                                                                                <  2:35618/100‑1 (MQ=255)
                      aTACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTc                                                                                   <  1:1575422/95‑1 (MQ=255)
                       tACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCC                                                                             <  2:2264008‑M2/100‑1 (MQ=255)
                       tACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCC                                                                             >  1:2195271‑M2/1‑100 (MQ=255)
                        aCGCAGTTGGACACCGCAAGATGTGTTTTTTTTTTTTTTTTTATTCACACAATCATGAATTGATTAACCCGCGCTGCCGGACACGACAGAGTCGCAt                                                                               >  1:918961/1‑97 (MQ=255)
                          gCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGC                                                                          >  1:1433986‑M2/1‑100 (MQ=255)
                          gCAGCTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGTCATCATGAATTGCGTAACCCGTCCTGCCGGACACGACAGCGTCGCGTCCGGC                                                                          >  1:1440659‑M2/1‑100 (MQ=255)
                           catttggaCACCGCAAGATGTGTTTTTTGCCATTGAGTTCTTCCCGCCATCATGAATTGCGTAACCCGCCCTgccggatgcgacgctgtcgtgtccggca                                                                         <  1:95086‑M1/97‑29 (MQ=255)
                           cAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCa                                                                         <  1:56397‑M2/100‑2 (MQ=255)
                           cAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCa                                                                         >  2:1762250‑M2/1‑99 (MQ=255)
                            aGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCag                                                                        >  1:623579‑M2/1‑98 (MQ=255)
                             gTTGGACACCGCAAGTTGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGCATTGCGAAACCCGCCCTGCCGGACACGACCGCTTCGCATCCGGCag                                                                        >  1:934771‑M2/1‑97 (MQ=255)
                               tGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccggatgcgacgctgtcgtgtccggcagggc                                                                     <  1:650795‑M1/100‑33 (MQ=255)
                               tGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTgccggatgcgacgctgtcgtgtccggcagggc                                                                     <  1:2833882‑M1/100‑33 (MQ=255)
                               tGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTca                                                                     >  2:899826/1‑100 (MQ=255)
                                ggACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCACCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcac                                                                    <  2:2621504/100‑1 (MQ=255)
                                 gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   >  1:761072/1‑100 (MQ=255)
                                 gACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTcaca                                                                   >  2:139627/1‑100 (MQ=255)
                                   cacCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAgg                                                                 <  2:196714/100‑1 (MQ=255)
                                    acCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGt                                                                <  2:1310439/100‑1 (MQ=255)
                                     ccGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCAGACACGACAGCGTCGCATCCGGCAGTCACAGGTc                                                               >  1:21721/1‑100 (MQ=255)
                                       gCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCgg                                                             >  2:667654/1‑100 (MQ=255)
                                        cAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGc                                                            <  2:911420/100‑1 (MQ=255)
                                         aaGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCg                                                           <  1:2689151/100‑1 (MQ=255)
                                         aaGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCg                                                           <  2:737227/100‑1 (MQ=255)
                                           gATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGAt                                                         <  1:2194097/100‑1 (MQ=255)
                                             tgtgTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAc                                                       >  1:1367156/1‑100 (MQ=255)
                                                  tttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgccc                                                  <  1:1474928/100‑1 (MQ=255)
                                                  tatctGCCCTTCAGTCATTCCCGCCATCATGAATTGCGTACCCCGCCCTGTCGGACACGGTAGTGTTGCATCCTGCAGTCACAGGTCGGCTTTAccgcc                                                   <  1:2463899/95‑1 (MQ=255)
                                                   ttttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATAccgccca                                                 >  2:1474931/1‑99 (MQ=255)
                                                     ttGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCt                                               <  2:2892323/100‑1 (MQ=255)
                                                      tGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTc                                              <  1:89364/100‑1 (MQ=255)
                                                        ccATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCg                                            <  2:1109930/100‑1 (MQ=255)
                                                         cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                           >  2:381632/1‑100 (MQ=255)
                                                         cATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGt                                           >  2:374789/1‑100 (MQ=255)
                                                          aTTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTa                                          >  1:776340/1‑100 (MQ=255)
                                                             gAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTc                                       <  1:1376821/100‑1 (MQ=255)
                                                               gTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCCGTCACAGGTCGGCGATACCGCCCGCTCCGTCTTCTa                                     >  1:1241713/1‑100 (MQ=255)
                                                                 tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                   <  2:2014693/100‑1 (MQ=255)
                                                                 tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                   >  1:2663635/1‑100 (MQ=255)
                                                                 tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                   <  1:2374324/100‑1 (MQ=255)
                                                                 tATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACg                                   <  1:294201/100‑1 (MQ=255)
                                                                  aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                  <  2:1426822/100‑1 (MQ=255)
                                                                  aTTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGACAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGa                                  <  1:1589162/100‑1 (MQ=255)
                                                                   ttCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGaa                                 <  2:1668733/100‑1 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  1:2048104/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  1:469910/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               >  2:578942/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               <  2:1928914/100‑1 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTAATCTACGAata                               >  1:1906657/1‑100 (MQ=255)
                                                                     cccGCCATCATGAATTGCGTAACCCGCCCTCCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAata                               <  2:356358/100‑1 (MQ=255)
                                                                      ccGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAatat                              >  1:1241365/1‑100 (MQ=255)
                                                                       cGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAACAtt                             >  1:1379094/1‑100 (MQ=255)
                                                                         ccATCATGAATTGCGTAACCCGCCCTGCGGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTc                           <  1:578941/100‑1 (MQ=255)
                                                                           atcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCg                         <  2:2666543/100‑1 (MQ=255)
                                                                           atcatGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCg                         <  1:1740602/100‑1 (MQ=255)
                                                                                gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                    >  1:1576205/1‑100 (MQ=255)
                                                                                gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                    >  1:2586599/1‑100 (MQ=255)
                                                                                gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                    >  1:2586724/1‑100 (MQ=255)
                                                                                gAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAAt                    >  1:2714457/1‑100 (MQ=255)
                                                                                  aTTGCGTAACCCGCCCTGCCGGACCCGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTATGAATATTTCCgg                        >  2:643201/1‑94 (MQ=255)
                                                                                     gCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCtt               >  1:765059/1‑100 (MQ=255)
                                                                                      cGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcagaaaacacatcttgc              <  1:1982338‑M2/100‑61 (MQ=255)
                                                                                       gTAACCCGCCCTGCCGGACATGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg             >  1:892522/1‑100 (MQ=255)
                                                                                       gTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTg             >  2:1892845/1‑100 (MQ=255)
                                                                                          aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg          <  1:2394037/100‑1 (MQ=255)
                                                                                          aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg          >  2:473524/1‑100 (MQ=255)
                                                                                          aCCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATg          >  1:2890631/1‑100 (MQ=255)
                                                                                           cccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGc         >  2:692437/1‑100 (MQ=255)
                                                                                            ccGCCCTGCCGGACACGACAGCGTCGCATCCGGCTGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGcc        <  1:1533535/100‑1 (MQ=255)
                                                                                            ccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGCTACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGcc        >  2:1818446/1‑100 (MQ=255)
                                                                                            ccGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGcc        <  2:1510235/100‑1 (MQ=255)
                                                                                             cGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCa       <  2:1687178/100‑1 (MQ=255)
                                                                                             cGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCa       >  2:580023/1‑100 (MQ=255)
                                                                                              gCCCTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtcca      <  1:2833882‑M2/100‑69 (MQ=255)
                                                                                              gCCCTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtcca      <  1:650795‑M2/100‑69 (MQ=255)
                                                                                                 cTgccggatgcgacgctgtcgtgtccggcagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact   >  1:623579‑M1/1‑2 (MQ=255)
                                                                                                 cTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact   <  1:2104229‑M2/100‑72 (MQ=255)
                                                                                                 cTGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaact   <  2:1452829‑M2/100‑72 (MQ=255)
                                                                                                  tgccggatgcgacgctgtcgtgtccggcagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaactg  <  1:56397‑M1/100‑100 (MQ=255)
                                                                                                  tgccggatgcgacgctgtcgtgtccggcagggcgggttacgcaattcatgatggcgggaataactcaatggcaaaaaacacatcttgcggtgtccaactg  >  2:1762250‑M1/1‑1 (MQ=255)
                                                                                                  tGCCGGACACGACAGCGTCGCATCCGGCagggcgggttacgcaattcatgatggcgggaagaactcaatggcaaaaaacacatcttgcggtgtccaaatg  <  1:95086‑M2/100‑73 (MQ=255)
                                                                                                  |                                                                                                   
GACGCCCTGCACTTTGCCACGAATACGCAGTTGGACACCGCAAGATGTGTTTTTTGCCATTGAGTTATTCCCGCCATCATGAATTGCGTAACCCGCCCTGCCGGACACGACAGCGTCGCATCCGGCAGTCACAGGTCGGCGATACCGCCCGCTCCGTATTCTACGAATATTTCCGGGAATTCCTTTGATGCCAGAACA  >  NC_000913/2837366‑2837563

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.