New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4201782 =99 (0.950)15 (0.180) 9/144 NT 18.3% intergenic (‑94/‑144) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR
?NC_000913 4201828 = 54 (0.650)intergenic (‑140/‑98) zraP/zraS Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR

Only 100 of 154 total aligned reads displayed.

TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881
                                                                                                   |                                                                                                   
tttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACg                                                                                                     <  1:2117594/100‑1 (MQ=255)
tcttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatg                                                                                                     >  2:2263976‑M1/100‑100 (MQ=255)
tcttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatg                                                                                                     <  2:844915‑M1/1‑1 (MQ=255)
  ttcttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAg                                                                                                   <  2:1916309‑M1/3‑1 (MQ=255)
  tCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAg                                                                                                   <  2:146971/100‑1 (MQ=255)
    cttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTa                                                                                                 >  2:1681957‑M1/96‑100 (MQ=255)
    cttctttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTa                                                                                                 >  1:315994‑M1/96‑100 (MQ=255)
         ttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAAt                                                                                            <  1:1807764‑M1/10‑1 (MQ=255)
         ttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAAt                                                                                            >  1:2448327‑M1/91‑100 (MQ=255)
         ttgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAAt                                                                                            >  1:1293453‑M1/91‑100 (MQ=255)
         tAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAAt                                                                                            >  1:948855/1‑100 (MQ=255)
          tgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATg                                                                                           <  1:434768‑M1/11‑1 (MQ=255)
          tgcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATg                                                                                           <  2:1982162‑M1/11‑1 (MQ=255)
          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                           <  2:1249731/100‑1 (MQ=255)
           gcctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGa                                                                                          <  1:839528‑M1/12‑1 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         >  2:1056727‑M1/88‑100 (MQ=255)
            cctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGAc                                                                                         <  2:839182‑M1/13‑1 (MQ=255)
             ctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACt                                                                                        >  2:1823429‑M1/87‑100 (MQ=255)
             ctgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACt                                                                                        <  2:1581731‑M1/14‑1 (MQ=255)
             ctgctcatccctctctgacagcacaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATg                                                                                           >  1:2175843‑M1/87‑97 (MQ=255)
             cctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACt                                                                                        >  2:2473675/1‑100 (MQ=255)
              tgctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaacgcttaagtttcaatGAGTAAAAATGa                                                                                          <  1:238513‑M1/12‑1 (MQ=255)
              ctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGAAAAAATGACTc                                                                                       <  1:93601/100‑1 (MQ=255)
               gctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacaaaaaggcttaagtttcaatGAGTAAAAATGACTCg                                                                                      <  2:1435528‑M1/16‑1 (MQ=255)
                ctcatccctttctgacagcagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGc                                                                                     >  2:233542‑M1/84‑100 (MQ=255)
                ccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGc                                                                                     >  1:2126263/1‑100 (MQ=255)
                  aGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCct                                                                                   >  2:2751249/1‑100 (MQ=255)
                   gtttttGTTTCACTTCGTCTATTTTATCTTCTGTGCCATCGATTAAACGTACTTATGACGTGTAATCTGTCATGATATTCTATTAAAAATGACTCGcc                                                                                    <  1:264178/94‑1 (MQ=255)
                      gTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgctg                                                                               >  2:1255928/1‑100 (MQ=255)
                      gTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgctg                                                                               >  2:550956/1‑100 (MQ=255)
                        tGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCg                                                                             <  2:2805662/100‑1 (MQ=255)
                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                            >  2:1807770/1‑100 (MQ=255)
                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                            <  1:1738756/100‑1 (MQ=255)
                          tCTTACTTCGGGTATTGCATCTTCGGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCggg                                                                           <  1:1159001/100‑1 (MQ=255)
                          tCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                            >  1:2720538/1‑99 (MQ=255)
                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGt                                                                          <  1:2817498/100‑1 (MQ=255)
                              aCTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGc                                                                       >  1:1086478/1‑100 (MQ=255)
                              aCTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGc                                                                       <  2:475931/100‑1 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                      <  2:1342774/100‑1 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                      >  1:1435525/1‑100 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                      >  2:1107704/1‑100 (MQ=255)
                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGACTGCTGCGGGTAGCg                                                                      >  1:1162512/1‑100 (MQ=255)
                                 tCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGCTATGACGGGTAATCTGGCATGATAAACGCGTAAAAATGACTCGCCTGCTGCGGGTAGCGAg                                                                    <  2:858975/100‑1 (MQ=255)
                                 tCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAg                                                                    <  1:550955/100‑1 (MQ=255)
                                 tCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAg                                                                    >  2:502301/1‑100 (MQ=255)
                                  cagaaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGt                                                                   >  2:909425‑M1/66‑100 (MQ=255)
                                   gggTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTc                                                                  <  2:191325/100‑1 (MQ=255)
                                    ggTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCa                                                                 >  2:1415508/1‑100 (MQ=255)
                                    ggTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCa                                                                 >  1:1398675/1‑100 (MQ=255)
                                     aaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAt                                                                >  1:85495‑M1/63‑100 (MQ=255)
                                     aaatcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAt                                                                >  2:1355629‑M1/63‑100 (MQ=255)
                                       aTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                              >  2:2010510/1‑100 (MQ=255)
                                        tcatgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                             >  1:459730‑M1/60‑100 (MQ=255)
                                         tGCATCTTCCGTTCCAACGATGAAACGCTGATATGCCGGGTAATCTGGCATGATAAACGAGTAAATATGACTCGCTACCCGCAGCAGGCGAGTCAttttt                                                            <  1:2592189/100‑1 (MQ=18)
                                         tGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttttt                                                            >  2:2101299/1‑100 (MQ=255)
                                         catgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttttt                                                            >  2:1189667‑M1/59‑100 (MQ=255)
                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                           >  2:1632783/1‑100 (MQ=255)
                                          atgccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                           >  1:10035‑M1/58‑100 (MQ=255)
                                           cATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTAc                                                          <  2:1669232/100‑1 (MQ=255)
                                           cATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTAc                                                          >  1:61413/1‑100 (MQ=255)
                                            gccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACt                                                         >  1:1852173‑M1/56‑100 (MQ=255)
                                            gccatcttttatcagcgcttaccctgcgctgtaacacaaaggcttaagtttcaatGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACt                                                         >  2:2685252‑M1/56‑100 (MQ=255)
                                            aTCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACt                                                         <  2:144787/100‑1 (MQ=255)
                                               ttCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAt                                                      >  2:2558516/1‑100 (MQ=255)
                                               ttCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAt                                                      >  1:1508040/1‑100 (MQ=255)
                                                      ccAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                               >  2:787413/1‑100 (MQ=255)
                                                      ccAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                               >  2:2623168/1‑100 (MQ=255)
                                                       cAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACtt                                              >  2:109770/1‑100 (MQ=255)
                                                         aCGATGAAACGGTGATATGACGGGTAATCTGGCAGGATAAAGGAGTAAAAATGACTCGCCGGCTGCGGGTAGCGAGTCATTTTTGCTCATTGAAACt                                               <  1:1665495/97‑1 (MQ=255)
                                                         aCGATGAAACGCTGATATGACGGGTAATCTGGCATGATACACGAGTAAAAATGACTCGGCTGCTGCGGGTAGCGAGTCATATTTACTCATTGAAACTTaa                                            >  1:717596/1‑100 (MQ=255)
                                                           gATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGc                                          <  1:2050474/100‑1 (MQ=255)
                                                                aaCGCTGATATGCCGGGTAATCTGGCATGATAAACGAGTAAAACTGACTCGCCTGCTGCGGGTAGCGTGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     <  2:2761352/100‑1 (MQ=255)
                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                     <  1:1032034/100‑1 (MQ=255)
                                                                       atatGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTCGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACa                              <  1:1123735/100‑1 (MQ=255)
                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                           >  2:398091/1‑100 (MQ=255)
                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                           <  1:2208678/100‑1 (MQ=255)
                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                           >  2:241973/1‑100 (MQ=255)
                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                           >  1:1349411/1‑100 (MQ=255)
                                                                           gACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGGCATTATTACTCATTGAAACTTAAGCCATTGTGTTACAgcg                           >  1:2723828/1‑99 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGTCTGCTGCGGGTAGCGAGTCCTTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        <  1:1585815/100‑1 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        >  1:2252781/1‑100 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        <  1:1967542/100‑1 (MQ=255)
                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                        >  2:2877272/1‑100 (MQ=255)
                                                                                 tAATCTGGCATGATAAACGAGTAAAAATGTCTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                      <  1:332177/98‑1 (MQ=255)
                                                                                     cTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCCTTGACACTTAACCCTTTGTGTTACAGCGCAGGGTAAgag                >  1:2880694/1‑98 (MQ=255)
                                                                                      tGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcgc               >  2:1633699/1‑100 (MQ=255)
                                                                                       ggCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCt              >  1:1514576/1‑100 (MQ=255)
                                                                                       ggCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCt              <  2:61414/100‑1 (MQ=255)
                                                                                         cATGATAAACGAGTAAAAATGCCTCGCCTGCTGCGGGGAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGTGTAAGCGCTGa            <  1:40518/100‑1 (MQ=255)
                                                                                         cATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGa            >  2:2055013/1‑100 (MQ=255)
                                                                                         cATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGa            <  2:1927617/100‑1 (MQ=255)
                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATa          <  1:1879870/100‑1 (MQ=255)
                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATa          <  2:2352988/100‑1 (MQ=255)
                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAACGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTATAGCGCAGGGTAAGCGCTGATa          >  1:1562434/1‑100 (MQ=255)
                                                                                            gATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTACGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaa         >  2:278588/1‑100 (MQ=255)
                                                                                            gATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaa         >  1:533707/1‑100 (MQ=255)
                                                                                            gATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaa         >  1:830776/1‑100 (MQ=255)
                                                                                                aaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGa     >  1:911583/1‑100 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  >  2:381389‑M1/1‑100 (MQ=255)
                                                                                                   GAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATgg  <  2:1098834‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATGG  >  NC_000913/4201683‑4201881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.