New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2593024NA (NA)11 (0.120) 6/164 NT NA noncoding (47/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2593056 NA (NA)noncoding (79/83 nt) REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences REP180 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 157 total aligned reads displayed.

AAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACG  >  NC_000913/2592957‑2593155
                                                                                                    |                                                                                                   
aagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGC                                                                                                     >  2:709074‑M2/1‑100 (MQ=255)
aagTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGC                                                                                                     >  1:681343‑M2/1‑100 (MQ=255)
 agTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGcc                                                                                                    >  2:401910/1‑100 (MQ=255)
  gTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCa                                                                                                   <  1:1717773/100‑1 (MQ=255)
   tAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAg                                                                                                  >  1:1141857/1‑100 (MQ=255)
     aGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGt                                                                                                <  2:1026048/100‑1 (MQ=255)
       cTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTaa                                                                                              >  2:1636623/1‑100 (MQ=255)
         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATc                                                                                            <  2:2021512/100‑1 (MQ=255)
         gAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATc                                                                                            <  2:158779/100‑1 (MQ=255)
            tGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGt                                                                                         >  1:1069515/1‑100 (MQ=255)
            tGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGt                                                                                         >  2:199889/1‑100 (MQ=255)
            tGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGt                                                                                         >  1:942374/1‑100 (MQ=255)
             gCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTc                                                                                        >  1:1852599/1‑100 (MQ=255)
              ntCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCt                                                                                       >  2:1422060/2‑100 (MQ=255)
              cTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTc                                                                                        >  1:2127943/1‑99 (MQ=255)
                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                     >  2:148979/1‑100 (MQ=255)
                cAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCttt                                                                                     >  1:2847899/1‑100 (MQ=255)
                 aaCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCtttt                                                                                    <  2:1688233/100‑1 (MQ=255)
                  aCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTa                                                                                   <  2:1649843/100‑1 (MQ=255)
                  aCCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTa                                                                                   <  1:1750812/100‑1 (MQ=255)
                    cGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTAca                                                                                 <  1:2247249/100‑1 (MQ=255)
                      attgCCGGATGTGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                                                               >  1:2449878/4‑100 (MQ=37)
                      attgCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTAcatc                                                                               >  2:2117679/4‑100 (MQ=37)
                        ggCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTNcatcat                                                                             >  2:2274578/1‑100 (MQ=255)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  2:2216489/1‑100 (MQ=37)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  2:1389226/1‑100 (MQ=25)
                         gCCGGATGCGGCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAtt                                                                            >  2:1503172/1‑100 (MQ=37)
                          ccggatgcggCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                                                           >  2:986143/9‑100 (MQ=37)
                          ccggatgcggCGTTAACGCCTTATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCAttt                                                                           >  1:2174696/9‑100 (MQ=37)
                           cGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTc                                                                          <  2:793784/100‑1 (MQ=255)
                               tAAGGCGTTAACGCCGCATCCGGCAATCGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATc                                                                      <  2:2261541/100‑1 (MQ=255)
                                 aGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcac                                                                    >  2:667914/1‑100 (MQ=255)
                                  ggCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATcaca                                                                   <  1:694324/100‑1 (MQ=255)
                                   gCGTTAACGCCGCATCCAGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcat                                                                  >  2:884894/1‑100 (MQ=255)
                                    cGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatc                                                                 >  2:1444342/1‑100 (MQ=255)
                                    cGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatc                                                                 >  2:2715275/1‑100 (MQ=255)
                                     gTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatca                                                                <  2:222911/100‑1 (MQ=255)
                                       tAACGCCGCATCCGGCAATGGTGAACGCTGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatc                                                              >  1:2891703/1‑100 (MQ=255)
                                       tAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCAcatcatc                                                              >  1:288875/1‑100 (MQ=255)
                                          cgccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTACTCTGTCTTTTACATCATTTCAATCACatgatcatc                                                           >  2:2641823/1‑100 (MQ=255)
                                           gccgcATCCGGCCATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCGTATCAGGCCAGGTAATCTGTCTTTTAGATCATTTCAATCACATCATCAACg                                                          >  1:2651153/1‑100 (MQ=37)
                                            ccgcATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGc                                                         <  1:993618/100‑1 (MQ=255)
                                               cATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAg                                                      <  1:1158497/100‑1 (MQ=255)
                                               cATCCGGCAATGCTGAACGATGCCTGATGCGCCGCGCACAGTGT‑TTATCAGGCCAGATAATCTGTCTTTTACATCTTTTCAATCACATCATCATCGCCan                                                      <  1:1954209/100‑2 (MQ=255)
                                                aTCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAgg                                                     <  1:2506237/100‑1 (MQ=255)
                                                 tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                                                    >  2:1734593/1‑100 (MQ=255)
                                                 tCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                                                    <  2:2095882/100‑1 (MQ=255)
                                                  ccGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGc                                                    <  1:1164174/99‑1 (MQ=255)
                                                  ccGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCt                                                   >  1:421960/1‑100 (MQ=255)
                                                   cGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCt                                                   >  1:1364278/1‑99 (MQ=255)
                                                    ggCAATGGTGAACGATGCCTGATGCGACGCTCCA‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCtca                                                 >  1:238690/1‑98 (MQ=255)
                                                    ggCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTa                                                 >  2:1208842/1‑100 (MQ=255)
                                                    ggCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTa                                                 >  1:2016375/1‑100 (MQ=255)
                                                      cAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTAcc                                               >  2:2191568/1‑100 (MQ=255)
                                                           gTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCAc                                          >  2:1858558/1‑100 (MQ=255)
                                                             gAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACt                                         >  1:1813397/1‑99 (MQ=255)
                                                               aCGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagct                                      <  1:2120325‑M2/100‑64 (MQ=255)
                                                                cGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagctt                                     <  1:2218096‑M2/100‑65 (MQ=255)
                                                                 gATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagctta                                    <  2:2876760‑M2/100‑66 (MQ=255)
                                                                  aTGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttac                                   <  2:2336603‑M2/100‑67 (MQ=255)
                                                                  aTGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttac                                   <  2:2702922‑M2/100‑67 (MQ=255)
                                                                  aTGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttac                                   <  1:1819569‑M2/100‑67 (MQ=255)
                                                                   tGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCt                                  <  2:864569/100‑1 (MQ=255)
                                                                       tGATGCGACGCTCAC‑GCGTCTTATCAGTCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGTCTTACCGCCACTTAGCGCTtcgt                              <  1:558191/100‑1 (MQ=255)
                                                                        gATGTGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTtcgtc                             <  2:1595724/100‑1 (MQ=255)
                                                                        gATGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttc                             <  2:1688000‑M2/100‑73 (MQ=255)
                                                                          tGCGACGCTCAC‑GCGTCTTATCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcacgcagcttacttcttcg                            <  1:2714798‑M2/99‑74 (MQ=255)
                                                                          tGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGa                           <  2:2431537/100‑1 (MQ=255)
                                                                           gCGTCGCTCAC‑GCGTCTTATCAGGCGAGGTAATCTGTCTTTTACATCATTTCAGTCACCTCATCATCGCCAGGCTTACCGCCACTTGGCGCTccgtcg                            >  1:1454795/1‑98 (MQ=255)
                                                                           gCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaa                          <  2:1679294/100‑1 (MQ=255)
                                                                           gCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaa                          >  2:2329851/1‑100 (MQ=255)
                                                                            cGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGaaa                         <  1:1057084/100‑1 (MQ=255)
                                                                             gACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaat                        >  2:2393406/1‑100 (MQ=255)
                                                                               cGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACCTCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAactaa                      >  1:2048289/1‑100 (MQ=255)
                                                                               cGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaataa                      >  1:233182/1‑100 (MQ=255)
                                                                                gCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAaataat                     <  2:2475600/100‑1 (MQ=255)
                                                                                  tCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGt                   <  1:954738/100‑1 (MQ=255)
                                                                                       gcgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCg               <  2:1878991/100‑1 (MQ=255)
                                                                                       gcgTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCg               <  2:1669147/100‑1 (MQ=255)
                                                                                           cTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGact           >  1:1127176/1‑98 (MQ=255)
                                                                                           cTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAAt           <  2:2769502/100‑1 (MQ=255)
                                                                                            ttATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg          >  2:2163812/1‑100 (MQ=255)
                                                                                            ttATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg          <  2:777552/100‑1 (MQ=255)
                                                                                            ttATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATAGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATg          <  1:1836217/100‑1 (MQ=255)
                                                                                             tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         <  1:2025719/100‑1 (MQ=255)
                                                                                             tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         >  1:2641339/1‑100 (MQ=255)
                                                                                             tATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATgg         <  2:1132164/100‑1 (MQ=255)
                                                                                              aTCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGt        >  2:1655096/1‑100 (MQ=255)
                                                                                              aTCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGt        <  2:2502772/100‑1 (MQ=255)
                                                                                               tCAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagt       <  2:1381059‑M2/100‑95 (MQ=255)
                                                                                                cAGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtc      <  2:2251406‑M2/100‑96 (MQ=255)
                                                                                                 aGGCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcg     <  2:34551‑M2/100‑97 (MQ=255)
                                                                                                  ggCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgt    <  2:1040522‑M2/100‑98 (MQ=255)
                                                                                                  ggCCAGGTAATCTGTCTTTTACATCATTTCGATTACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGTAATGGTATaa    >  1:1910290/1‑100 (MQ=255)
                                                                                                   gCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgtc   <  2:309744‑M2/100‑99 (MQ=255)
                                                                                                   gCatcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgtc   <  2:1508318‑M2/100‑99 (MQ=255)
                                                                                                   gCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGACATAATGTTTCGGAATGGtatacc   <  1:132595/100‑3 (MQ=255)
                                                                                                   gCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAAc   >  1:237418/1‑100 (MQ=255)
                                                                                                   gCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAAc   <  2:2184648/100‑1 (MQ=255)
                                                                                                    catcgttcaccattgccggatgcggcgttaacgccttatccggcctacggttgagcactcagcttacttcttcggttgatcctttttcggccagtcgtcg  <  1:2746256‑M2/100‑100 (MQ=255)
                                                                                                    |                                                                                                   
AAGTAAGCTGAGTGCTCAACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGAACGATGCCTGATGCGACGCTCAC‑GCGTCTTATCAGGCCAGGTAATCTGTCTTTTACATCATTTCAATCACATCATCATCGCCAGGCTTACCGCCACTTAGCGCTTCGTCGAAATAATGTTTCGGAATGGTATAACG  >  NC_000913/2592957‑2593155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.