New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3708276 =NA (NA)5 (0.050) 4/170 NT NA noncoding (5/86 nt) REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3708306 = NA (NA)noncoding (35/86 nt) REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 160 total aligned reads displayed.

TGTCACAAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTG  >  NC_000913/3708207‑3708405
                                                                                                   |                                                                                                   
tGTCACAAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACa                                                                                                     >  2:2573968/1‑100 (MQ=255)
  gaggttcgactcgacgtaggcctgataagacgcgtcagcgtcgcatcaggcaaatgtgccggccattGTCGAATAAGGCGGTCGCGCCGCATCCGACAAt                                                                                                   >  1:2055782‑M1/68‑100 (MQ=255)
  gaggttcgactcgacgtaggcctgataagacgcgtcagcgtcgcatcaggcaaatgtgccggccattGTCGAATAAGGCGGTCGCGCCGCATCCGACAAt                                                                                                   >  1:1256912‑M1/68‑100 (MQ=255)
   cacaAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATg                                                                                                  >  2:1916961/1‑100 (MQ=255)
    acaAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATgg                                                                                                 <  1:2118878/100‑1 (MQ=255)
    acaAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATgg                                                                                                 <  1:954935/100‑1 (MQ=255)
    acaAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATgg                                                                                                 >  2:1734182/1‑100 (MQ=255)
     gttcgactcgacgtaggcctgataagacgcgtcagcgtcgcatcaggcaaatgtgccggccattGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGc                                                                                                >  2:1344453‑M1/65‑100 (MQ=255)
     caAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGc                                                                                                >  2:2627143/1‑100 (MQ=255)
     caAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGc                                                                                                >  2:1442749/1‑100 (MQ=255)
      ttcgactcgacgtaggcctgataagacgcgtcagcgtcgcagcaggcaaatgtgccggccattGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGcc                                                                                               >  1:207811‑M1/64‑100 (MQ=255)
       aaTCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGcc                                                                                               <  1:2027796/99‑1 (MQ=255)
        aTCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCgg                                                                                             <  2:2217719/100‑1 (MQ=255)
        aTCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCgg                                                                                             >  2:1429217/1‑100 (MQ=255)
           cGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGcac                                                                                          >  2:1438073/1‑100 (MQ=255)
           cGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTAGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGcac                                                                                          >  2:1226118/1‑100 (MQ=255)
              tAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACAtt                                                                                       >  2:1638150/1‑100 (MQ=255)
               aaTGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATGAGTCGGTCGGGGTGCATCCCACAATGGCCCGc                                                                                            >  1:2795491/1‑94 (MQ=255)
                aTGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTg                                                                                     >  2:1479648/1‑100 (MQ=255)
                 tGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGc                                                                                    <  2:2895361/100‑1 (MQ=255)
                  ggATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGcc                                                                                   <  2:1886720/100‑1 (MQ=255)
                  ggATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGcc                                                                                   <  1:1203762/100‑1 (MQ=255)
                   gATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCt                                                                                  <  2:1705643/100‑1 (MQ=255)
                      aGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGAt                                                                               <  1:816969/100‑1 (MQ=255)
                       gTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGAt                                                                               >  2:265266/1‑99 (MQ=255)
                       gTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATg                                                                              >  2:633831/1‑100 (MQ=255)
                       gTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATg                                                                              <  1:363966/100‑1 (MQ=255)
                            atatGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACg                                                                         <  2:506896/100‑1 (MQ=255)
                             tatGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGc                                                                        >  2:2723502/1‑100 (MQ=255)
                                 gggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTgtc                                                                    >  1:1763506/1‑98 (MQ=255)
                                 gggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAc                                                                    <  2:1058288/100‑1 (MQ=255)
                                 gggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAc                                                                    >  1:506455/1‑100 (MQ=255)
                                    cgcAAATTTGGCAGGGAGATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCTCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAcgcg                                                                 <  1:1115240/100‑1 (MQ=255)
                                    cgcAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAcgcg                                                                 >  2:1574679/1‑100 (MQ=255)
                                      cAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTc                                                               <  1:1984465/100‑1 (MQ=255)
                                      cAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTc                                                               >  2:1782132/1‑100 (MQ=255)
                                      cAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTc                                                               <  1:2145026/100‑1 (MQ=255)
                                       aaaTTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCt                                                              <  2:1974785/100‑1 (MQ=255)
                                           ttGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATc                                                          <  2:571229/100‑1 (MQ=255)
                                            tGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCACCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCa                                                         <  2:351665/100‑1 (MQ=255)
                                             ggCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAg                                                        >  2:2356429/1‑100 (MQ=255)
                                               cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGc                                                      <  2:421423/100‑1 (MQ=255)
                                               cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGc                                                      <  2:489971/100‑1 (MQ=255)
                                               cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGc                                                      >  1:722797/1‑100 (MQ=255)
                                                aGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGcc                                                     >  2:846934/1‑100 (MQ=255)
                                                aGGGAAATGTGTGTCATGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGcc                                                     <  2:2864388/100‑1 (MQ=255)
                                                  ggAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTa                                                   <  1:12778/100‑1 (MQ=255)
                                                  ggAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTa                                                   <  2:218979/100‑1 (MQ=255)
                                                   gAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGCCGCTGACGCGTCTTATCAGGCCTa                                                   <  1:1829897/99‑1 (MQ=255)
                                                       tgtgtgTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcg                                              <  2:566948/100‑1 (MQ=255)
                                                          gtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagt                                           >  2:1161663/1‑100 (MQ=255)
                                                          gtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagt                                           >  2:1161738/1‑100 (MQ=255)
                                                          gtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgag                                            <  1:1905203/99‑1 (MQ=255)
                                                          ctgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagt                                           <  1:1502373/99‑1 (MQ=255)
                                                           tgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtc                                          <  2:2526608/100‑1 (MQ=255)
                                                            gtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtcg                                         >  1:2458337/1‑100 (MQ=255)
                                                            gtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtcg                                         >  1:1426835/1‑100 (MQ=255)
                                                            gtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtag                                         >  2:1502376/1‑98 (MQ=255)
                                                             cggccattgtcggatgcggcgcgaccgccttattcgacAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtcga                                        >  1:2165751‑M2/39‑100 (MQ=255)
                                                              cGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGaa                                       >  2:1006831/1‑100 (MQ=255)
                                                               gtgtAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAAc                                      >  1:1001835/1‑100 (MQ=255)
                                                               gccattgtcggatgcggcgcgaccgccttattcgacAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAAc                                      >  2:1344453‑M2/37‑100 (MQ=255)
                                                                tgtAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAAcc                                     >  2:100267/1‑100 (MQ=255)
                                                                tgtAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAAcc                                     <  1:1878533/100‑1 (MQ=255)
                                                                  tAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTc                                   >  2:115347/1‑100 (MQ=255)
                                                                    ggTCGAATAAGGCGGTCGCGCCGCATCCGACAGTGGCCGGCACATGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTccc                                 <  1:428544/100‑1 (MQ=255)
                                                                     GTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCt                                <  2:1948114‑M1/100‑1 (MQ=255)
                                                                       CGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGc                              <  2:26563‑M1/100‑1 (MQ=255)
                                                                       CGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGc                              <  1:311319‑M1/100‑1 (MQ=255)
                                                                       CGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGc                              >  1:571692‑M1/1‑100 (MQ=255)
                                                                        GAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGcc                             <  1:1538383‑M1/100‑1 (MQ=255)
                                                                        GAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGcc                             >  1:2152934‑M1/1‑100 (MQ=255)
                                                                         aaTAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGccc                            >  1:820953/1‑100 (MQ=255)
                                                                           tAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGccccc                          <  2:528031/100‑1 (MQ=255)
                                                                            aaGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCg                         <  1:1924504/100‑1 (MQ=255)
                                                                             aGGCGGTCGCGCCGCATCCGACAATGGCAGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCg                         >  1:290483/1‑99 (MQ=255)
                                                                               gCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAg                      >  2:671709/1‑100 (MQ=255)
                                                                               gCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAg                      <  2:66872/100‑1 (MQ=255)
                                                                                cGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAgg                     <  1:2542865/100‑1 (MQ=255)
                                                                                cGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAgg                     <  2:1717523/100‑1 (MQ=255)
                                                                                cGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAgg                     <  2:1258350/100‑1 (MQ=255)
                                                                                  gTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGtt                   <  1:1006829/100‑1 (MQ=255)
                                                                                    cgcgCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAgagatc                 >  2:2001125/1‑95 (MQ=255)
                                                                                    cgcgCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTtct                 <  1:1460486/100‑1 (MQ=255)
                                                                                     gcgcCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTtctc                <  2:901915/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCa               <  2:1072917/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCa               <  2:757967/100‑1 (MQ=255)
                                                                                      cgccgcATCCGACAATGGCCGGCACATTTGCCTGATGAGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCa               >  1:1563065/1‑100 (MQ=255)
                                                                                       gccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGGCCCCGGAGGTTCTCAt              >  1:2066840/1‑100 (MQ=255)
                                                                                        ccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATc             >  1:2829259/1‑100 (MQ=255)
                                                                                        ccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATc             <  1:1415924/100‑1 (MQ=255)
                                                                                         cgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATcc            >  2:2455142/1‑100 (MQ=255)
                                                                                         cgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATcc            <  2:117037/100‑1 (MQ=255)
                                                                                         cgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATcc            <  1:1314899/100‑1 (MQ=255)
                                                                                            aTCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCa         <  1:2176680/100‑1 (MQ=255)
                                                                                              ccGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATg       <  1:26562/100‑1 (MQ=255)
                                                                                               cgacAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGa      >  1:1575226‑M2/5‑100 (MQ=255)
                                                                                                 acAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGc    <  2:1101485‑M2/98‑1 (MQ=255)
                                                                                                  cAATGGCCGGCACATTTGCCTGATGCGACCCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCCCCTCCTCATCAGCt   >  1:2800553‑M2/2‑100 (MQ=255)
                                                                                                   aaTGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTg  >  2:1080949/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGTCACAAATCCGTTAATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTG  >  NC_000913/3708207‑3708405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.