New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)10 (0.100) 6/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 182 total aligned reads displayed.

TGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTA  >  NC_000913/4415892‑4416088
                                                                                                   |                                                                                                 
tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                                                   <  2:1196677‑M2/100‑1 (MQ=255)
cagcagcctgataactggcgagtataggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGAGCCGCATCCGGc                                                                                                   >  1:281947‑M1/71‑100 (MQ=255)
 gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                                                   >  2:1994926‑M2/1‑99 (MQ=255)
  tgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                                                 <  2:2835926/100‑1 (MQ=255)
  tgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                                                 <  2:1154636/100‑1 (MQ=255)
   gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                >  1:1107677/1‑100 (MQ=255)
   cagcctgataacttgcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                >  1:1222355‑M1/68‑100 (MQ=255)
   cagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                >  1:667919‑M1/68‑100 (MQ=255)
     gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCGTCCCGCATTGt                                                                                              <  1:1521864/100‑1 (MQ=255)
     gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                              >  1:1295228/1‑100 (MQ=255)
     gcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                              >  2:2779031‑M1/66‑100 (MQ=255)
      tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                             >  2:517323/1‑100 (MQ=255)
      cctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                             >  2:2508662‑M1/65‑100 (MQ=255)
       ctgataactggcgcgtacaggcgatactgtatgcatgggtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                                            >  1:2707783‑M1/64‑100 (MQ=255)
       aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                                            <  2:1833151/100‑1 (MQ=255)
        aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                           >  2:1843648/1‑100 (MQ=255)
        aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                           <  1:1239902/100‑1 (MQ=255)
         gataactggcgcgtacaggcgatactggatgcatgagtggcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCAGCCGGCATTGTTCAt                                                                                          >  1:327209‑M1/62‑100 (MQ=255)
          cGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAtt                                                                                         <  1:429449/100‑1 (MQ=255)
           gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAATGCGCTCGCGCCGCATCCCGCATTGTTCAttt                                                                                        <  2:1959260/100‑1 (MQ=255)
             ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                      >  2:2700021/1‑100 (MQ=255)
             ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                      <  1:2237121/100‑1 (MQ=255)
              taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGcn                                                                                     <  1:318487/100‑2 (MQ=255)
              taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                     <  2:1739177/100‑1 (MQ=255)
               aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                    <  2:1598751/100‑1 (MQ=255)
                cGACTGATGCGACGCTGGTTTCGATTAACTAAATGACATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                                                   >  2:2055476/1‑100 (MQ=255)
                cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                                                   <  2:1642933/100‑1 (MQ=255)
                cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                                                   >  2:448807/1‑100 (MQ=255)
                cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGACGCTCGCGACGCATCCGGCATTGTTCATTTGCTGt                                                                                   >  1:2560368/1‑100 (MQ=255)
                 gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATGGTTCATTTGCTg                                                                                    >  1:877156/1‑98 (MQ=255)
                   cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                <  2:1511273/100‑1 (MQ=255)
                   cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                <  1:1671445/100‑1 (MQ=255)
                     gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                              <  1:1616694/100‑1 (MQ=255)
                     gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTATAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                              >  2:2892565/1‑100 (MQ=255)
                        gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                                                           <  1:452396/100‑1 (MQ=255)
                         cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                                                          >  1:696657/1‑100 (MQ=255)
                         cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                                                          >  2:2026823/1‑100 (MQ=255)
                            cGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa                                                                       <  1:443440/100‑1 (MQ=255)
                              cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                     <  2:281911/100‑1 (MQ=255)
                               tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                    <  2:2588284/100‑1 (MQ=255)
                               tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                    <  2:1159721/100‑1 (MQ=255)
                                ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                                                   <  1:1643759/100‑1 (MQ=255)
                                ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                                                   <  2:1098717/100‑1 (MQ=255)
                                ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                                                   >  2:2365974/1‑100 (MQ=255)
                                    tCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACa                                                               >  2:1451798/1‑100 (MQ=255)
                                     cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                              >  2:2477971/1‑100 (MQ=255)
                                      gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                                             >  2:97727/1‑100 (MQ=255)
                                        ttAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTGGATATGATGTAGATGACACTCATTCCTACa                                                               >  1:980973/1‑96 (MQ=37)
                                          aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGAGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                         >  1:1410670/1‑100 (MQ=255)
                                            cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                       <  1:2488729/100‑1 (MQ=255)
                                            cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                       >  1:284447/1‑100 (MQ=255)
                                            cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGACGACACTCATGCATACAGTATCGcc                                                       <  1:1011206/100‑1 (MQ=255)
                                             tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                      >  2:2523530/1‑100 (MQ=255)
                                             tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                      >  1:2056494/1‑100 (MQ=255)
                                             tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                      >  2:1217637/1‑100 (MQ=255)
                                                    aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                               >  1:2658214/1‑100 (MQ=255)
                                                      tatGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc                                             <  1:1213587/100‑1 (MQ=255)
                                                        tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                           >  2:2662701/1‑100 (MQ=255)
                                                        tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                           <  1:2138727/100‑1 (MQ=255)
                                                        tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                           <  2:2667515/100‑1 (MQ=255)
                                                         gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                           >  1:2244284/1‑99 (MQ=255)
                                                           gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                        >  2:388701/1‑100 (MQ=255)
                                                           gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                        <  2:1862547/100‑1 (MQ=255)
                                                           gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                        >  1:582684/1‑100 (MQ=255)
                                                            aaaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt                                       <  1:2578022/100‑1 (MQ=255)
                                                             aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgc                                      <  1:1459418‑M2/100‑62 (MQ=255)
                                                              aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                     <  2:2316531/100‑1 (MQ=255)
                                                              aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCACGCATACAGTATCGCCTGTACGCGCCAGTTATCa                                     <  1:1512171/100‑1 (MQ=255)
                                                                   tAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGAATACAGTATCGCCTGTACGCGCCAGTTATCAGgct                                 >  2:62952/1‑99 (MQ=255)
                                                                    aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca                               <  2:1761704‑M2/100‑69 (MQ=255)
                                                                    aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgc                               >  1:975323/1‑100 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac                              <  1:11835‑M2/100‑70 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                              >  1:2653163/1‑100 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                              <  2:1445745/100‑1 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                              <  1:615500/100‑1 (MQ=255)
                                                                     ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAATTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                              >  2:1342917/1‑100 (MQ=255)
                                                                       ccGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacac                            <  1:1072019‑M2/100‑72 (MQ=255)
                                                                       CCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTgg                            <  1:1609084‑M1/100‑1 (MQ=255)
                                                                          GACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCt                         <  1:524790‑M1/100‑1 (MQ=255)
                                                                           ACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCtt                        >  1:703723‑M1/1‑100 (MQ=255)
                                                                            cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                       >  2:1295879/1‑100 (MQ=255)
                                                                            cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                       >  2:1296483/1‑100 (MQ=255)
                                                                            cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                       <  2:582685/100‑1 (MQ=255)
                                                                            cAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTc                       >  1:2157641/1‑100 (MQ=255)
                                                                             aaGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg                      <  2:749236/100‑1 (MQ=255)
                                                                             aaGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg                      >  1:185220/1‑100 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg                      >  2:944834/1‑99 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTa                    >  1:1678304/1‑100 (MQ=255)
                                                                                 cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                  <  1:1342915/100‑1 (MQ=255)
                                                                                   cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                >  1:2544316/1‑100 (MQ=255)
                                                                                   cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                >  1:1835337/1‑100 (MQ=255)
                                                                                   cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                <  1:224893/100‑1 (MQ=255)
                                                                                   cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                >  1:835403/1‑100 (MQ=255)
                                                                                     cgcgCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt              <  2:669633/100‑1 (MQ=255)
                                                                                     cgcgCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt              >  2:904387/1‑100 (MQ=255)
                                                                                     cgcgCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt              <  2:1933291/100‑1 (MQ=255)
                                                                                        gccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaat           >  1:635719/1‑100 (MQ=255)
                                                                                           gcATCCGGCATTGTTCATTTGCTGTAGATGCCACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTaataat        <  1:424320/100‑1 (MQ=255)
                                                                                               ccGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcctcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaat    <  2:1138756‑M2/100‑96 (MQ=255)
                                                                                                 ggCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaataa  >  2:174539‑M2/1‑3 (MQ=255)
                                                                                                   |                                                                                                 
TGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTA  >  NC_000913/4415892‑4416088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.