New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4634391 =106 (1.020)6 (0.060) 5/164 NT 5.8% coding (595/648 nt) ytjC phosphatase
?NC_000913 4634423 = 98 (1.030)coding (627/648 nt) ytjC phosphatase
Rejected: Frequency below cutoff threshold.

Only 100 of 146 total aligned reads displayed.

CTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTA  >  NC_000913/4634324‑4634521
                                                                                                   |                                                                                                  
cTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCa                                                                                                    <  1:759617/100‑1 (MQ=255)
 cgcccaattagtctacgctgtgaactgctgattccgatccgtcgttaacgctgcggctcatctaatACACGGGACATCTCGCATCTGGACGCCCCTGCAt                                                                                                   >  1:1915659‑M1/67‑100 (MQ=255)
  gcccaattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGTAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                                                  >  1:1894855‑M1/66‑100 (MQ=255)
  gTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAtt                                                                                                  <  2:1730641/100‑1 (MQ=255)
   ttCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTa                                                                                                 <  2:1870015/100‑1 (MQ=255)
    tCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAg                                                                                                >  2:2181960/1‑100 (MQ=255)
     cTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGa                                                                                               <  1:1902090/100‑1 (MQ=255)
     cTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGa                                                                                               >  1:1998157/1‑100 (MQ=255)
      aattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                                                              >  2:774315‑M1/62‑100 (MQ=255)
      aattaatctacgctgtgaactgctgattccgatccgtcgttaacgctgcagctcatctaatGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGAt                                                                                              >  2:2410988‑M1/62‑100 (MQ=255)
       aTTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATg                                                                                             >  1:339918/1‑100 (MQ=255)
         ttCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAg                                                                                           <  1:1410442/100‑1 (MQ=255)
          ttccgatctgATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGc                                                                                          <  2:1994526/91‑1 (MQ=255)
          tCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGc                                                                                          >  2:515670/1‑100 (MQ=255)
              gcgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCa                                                                                      >  2:1648290/1‑100 (MQ=255)
              gcgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCa                                                                                      >  1:1885019/1‑100 (MQ=255)
               cgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg                                                                                     <  1:2867911/100‑1 (MQ=255)
               cgTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg                                                                                     <  1:1404196/100‑1 (MQ=255)
                 tGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCg                                                                                   <  1:631411/100‑1 (MQ=255)
                   gATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGcagatcggaa                                                                                 >  1:1994518/1‑91 (MQ=255)
                    aTTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTa                                                                                <  1:594917/100‑1 (MQ=255)
                      tATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAac                                                                              >  1:1121711/1‑100 (MQ=255)
                       aTCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg                                                                             >  1:2605078/1‑100 (MQ=255)
                          aGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacgacg                                                                          <  2:2744943/100‑1 (MQ=255)
                           ggAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACgg                                                                         <  2:2276171/100‑1 (MQ=255)
                           ggAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACgg                                                                         >  2:1040481/1‑100 (MQ=255)
                           ggAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACgg                                                                         >  2:2694219/1‑100 (MQ=255)
                            gAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGa                                                                        >  2:1302824/1‑100 (MQ=255)
                             aaaGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGAt                                                                       >  1:2157324/1‑100 (MQ=255)
                             aaaGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGAt                                                                       >  2:701973/1‑100 (MQ=255)
                               aGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCg                                                                     <  1:2749471/100‑1 (MQ=255)
                                gCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCgg                                                                    >  1:28018/1‑100 (MQ=255)
                                 ccTGTGGCTGGCTTCTGCCTGGGTCGTTGAAACCGCAGTTGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTCCAGCGTTAACGACGGa                                                                        <  1:2757194/95‑1 (MQ=255)
                                  cTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGaa                                                                  <  2:2363783/100‑1 (MQ=255)
                                   tgtgGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAAt                                                                 >  2:598048/1‑100 (MQ=255)
                                    gtgGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATc                                                                >  2:1003695/1‑100 (MQ=255)
                                    gtgGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATc                                                                <  2:215285/100‑1 (MQ=255)
                                      ggctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCAGTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcag                                                              <  1:1292663/100‑1 (MQ=255)
                                       gctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcagc                                                             <  1:2475994/100‑1 (MQ=255)
                                       gctggcGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATcagc                                                             >  2:2029943/1‑100 (MQ=255)
                                       gcgggcGTCTGGGTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATc                                                                <  1:2375744/94‑1 (MQ=255)
                                            cGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCTGAATCAGCAGTTc                                                        <  1:2123517/100‑1 (MQ=255)
                                            cGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATATCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTc                                                        >  2:2569175/1‑100 (MQ=255)
                                             gTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTca                                                       >  2:1762073/1‑100 (MQ=255)
                                             gTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTca                                                       >  1:85576/1‑100 (MQ=255)
                                                tggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAg                                                    >  2:2133162/1‑100 (MQ=255)
                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGc                                                   >  1:405634/1‑100 (MQ=255)
                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGc                                                   >  2:19998/1‑100 (MQ=255)
                                                 ggctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGc                                                   <  2:770948/100‑1 (MQ=255)
                                                  gctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCg                                                  >  1:1324309/1‑100 (MQ=255)
                                                  gctggGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCg                                                  >  2:2841029/1‑100 (MQ=255)
                                                    tggttggTTTAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGGTGCAGCTTTAATGACGGATCGGAATCAGCAGTTCACAGCGTa                                                <  1:1733143/94‑1 (MQ=255)
                                                     gggTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAg                                               >  2:2686708/1‑100 (MQ=255)
                                                      ggTCGTTGAAACCGCAGGGGACATCTCGCATGTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGa                                              <  1:282383/100‑1 (MQ=255)
                                                      ggTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGa                                              <  1:813895/100‑1 (MQ=255)
                                                       gTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGAt                                             >  2:1283580/1‑100 (MQ=255)
                                                          gTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGcagatcggaa                                          >  2:775504/1‑91 (MQ=255)
                                                          gTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTaa                                          >  1:770322/1‑100 (MQ=255)
                                                            tGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAAtt                                        >  1:2003232/1‑100 (MQ=255)
                                                            tGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAAtt                                        <  2:1619226/100‑1 (MQ=255)
                                                             tctaatgcaggggcgtccagatgcgagatgtcccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTg                                       >  1:932706‑M2/39‑100 (MQ=255)
                                                             gAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTg                                       >  1:1037772/1‑100 (MQ=255)
                                                             gAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTg                                       <  2:2733841/100‑1 (MQ=255)
                                                             gAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTg                                       >  2:1120063/1‑100 (MQ=255)
                                                               aaCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTggg                                     <  2:1617380/100‑1 (MQ=255)
                                                                aCCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGc                                    <  2:54549/100‑1 (MQ=255)
                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg                                   >  2:284807/1‑100 (MQ=255)
                                                                 ccGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCg                                   >  2:2326907/1‑100 (MQ=255)
                                                                 atgcaggggcgtccagatgcgagatgtcccgtgtATTAGATGAGCCGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGACTAATTGGGCg                                   >  1:1915659‑M2/35‑100 (MQ=255)
                                                                   GCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGAGCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAt                                 >  1:1782423‑M1/1‑100 (MQ=255)
                                                                    CAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGAGCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAtc                                >  1:2472980‑M1/1‑100 (MQ=255)
                                                                     AGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTCACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAtct                               >  1:479336‑M1/1‑100 (MQ=255)
                                                                     AGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGAtct                               >  1:2796988‑M1/1‑100 (MQ=255)
                                                                       GGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTcc                             >  1:526687‑M1/1‑100 (MQ=255)
                                                                         GACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCg                           >  1:2181953‑M1/1‑100 (MQ=255)
                                                                            aTCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCtt                        >  2:110390/1‑100 (MQ=255)
                                                                               tcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTgg                     >  1:812019/1‑100 (MQ=255)
                                                                               tcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTgg                     <  2:316322/100‑1 (MQ=255)
                                                                               tcGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTgg                     <  1:1236119/100‑1 (MQ=255)
                                                                                 gCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCa                   <  1:2436656/100‑1 (MQ=255)
                                                                                 gCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCa                   <  2:596309/100‑1 (MQ=255)
                                                                                   aTCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtc                 <  2:1433102/100‑1 (MQ=255)
                                                                                   aTCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtc                 >  2:905773/1‑100 (MQ=255)
                                                                                       ngACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct             >  1:2558630/2‑100 (MQ=255)
                                                                                       ggACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCAtcttct             >  2:2159500/1‑100 (MQ=255)
                                                                                         aCGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGc           <  1:944339/100‑1 (MQ=255)
                                                                                         aCGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGc           <  1:1528440/100‑1 (MQ=255)
                                                                                          cGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGCAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGcc          <  1:1022350/100‑1 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg       >  2:1451643‑M2/7‑100 (MQ=255)
                                                                                             ccctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg       >  1:2436071‑M2/7‑100 (MQ=255)
                                                                                              cctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg       >  1:2001962‑M2/6‑99 (MQ=255)
                                                                                              cctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCggg       >  1:110572‑M2/6‑99 (MQ=255)
                                                                                              cctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgt      >  2:1388807‑M2/6‑100 (MQ=255)
                                                                                               ctgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGCGCCATCTCCCGCTTTGGCATCTTCTGCCGGgta     <  1:1906531‑M2/96‑1 (MQ=255)
                                                                                                tgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGCATCAGAAGTTCACAGCGTATATTAATTGGGCGACCTCCCGCTTTGGCATCTTCTGCCGGgtag    <  2:714000‑M2/97‑1 (MQ=255)
                                                                                                tgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtag    <  1:2346994‑M2/97‑1 (MQ=255)
                                                                                                tgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtag    >  1:2907299‑M2/4‑100 (MQ=255)
                                                                                                tgcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtag    <  2:2436082‑M2/97‑1 (MQ=255)
                                                                                                 gcATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGgtagt   >  1:1759016‑M2/3‑100 (MQ=255)
                                                                                                   aTTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCCAAGCGTAGATTAATTGGGCGCTCTCCCGCTTTGCCATCTCCTGCCGCgtagta  >  1:1610799/1‑99 (MQ=255)
                                                                                                   |                                                                                                  
CTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAATCAGCAGTTCACAGCGTAGATTAATTGGGCGATCTCCCGCTTTGGCATCTTCTGCCGGGTAGTA  >  NC_000913/4634324‑4634521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.