BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638329	102 (0.980)	8 (0.080)	5/168	NT	7.3%	coding (152/1353 nt)	creD	inner membrane protein
*	?	NC_000913	= 4638348	106 (1.080)	8 (0.080)	5/168	NT	7.3%	coding (171/1353 nt)	creD	inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 138 total aligned reads displayed.

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

aaTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTggg                                                                                                     <  2:806714/100‑1 (MQ=255)

   gCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccg                                                                                                  <  2:1214366‑M2/100‑4 (MQ=255)

     tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgct                                                                                                >  1:964391‑M2/1‑95 (MQ=255)

     tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAACGGGCCGCAAAAACTCGTTGGGccgct                                                                                                <  1:2080128‑M2/100‑6 (MQ=255)

      gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTc                                                                                               >  1:1183336/1‑100 (MQ=255)

          cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                                           >  1:1336234/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          >  1:1355455/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          >  2:1405770/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          >  1:2628111/1‑100 (MQ=255)

           ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                                          >  2:2318129/1‑100 (MQ=255)

            gCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCt                                                                                         <  2:85999/100‑1 (MQ=255)

                 tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                                    >  1:629366/1‑100 (MQ=255)

                     tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGACCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                                                <  1:1805588/100‑1 (MQ=255)

                      gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTTCTGTGa                                                                               >  2:2638761/1‑100 (MQ=255)

                       tCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAATTCCCAGCGGGCCGCAAAAACTCGTTGGGCTGCTCATCGCTATTCCTGTGAc                                                                              <  1:154358/100‑1 (MQ=255)

                        cGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATAGCTATTCCTGTGAcc                                                                             >  2:2856959/1‑100 (MQ=255)

                              tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                                       >  2:2250760/1‑100 (MQ=255)

                               gctgctTACCGTAGCGATGTGGACGATGCGATTCGCGAAAGCGCCAGCGGGCCGCACAAACTCGCTGGGCCGCTCATCGCAATTCCTGTGACCGGGCtt                                                                       >  1:2013458/1‑99 (MQ=255)

                               gCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTAACAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCttt                                                                      >  2:1416228/1‑100 (MQ=255)

                                ccgATTACCGTAGCGATGTGGAAGATGTGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                                     >  2:855641/3‑100 (MQ=255)

                                cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAACAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                                     <  1:2519886/100‑1 (MQ=255)

                                cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                                     <  2:1740933/100‑1 (MQ=255)

                                 tGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtat                                                                    >  1:681315/1‑100 (MQ=255)

                                 tGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtat                                                                    >  1:1741227/1‑100 (MQ=255)

                                   aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                  <  1:273227/100‑1 (MQ=255)

                                    tgaCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                                                 <  1:1763576/98‑1 (MQ=255)

                                       ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                                              <  1:749283/100‑1 (MQ=255)

                                        cGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGc                                                             >  1:544596/1‑100 (MQ=255)

                                          tAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAg                                                           <  1:2285029/100‑1 (MQ=255)

                                           aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAATCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                                          <  1:1082184/100‑1 (MQ=255)

                                           aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgn                                                          <  1:2239510/100‑2 (MQ=255)

                                           aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                                          <  1:2368487/100‑1 (MQ=255)

                                           aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                                          <  2:2198061/100‑1 (MQ=255)

                                                tgtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAACCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagag                                                     <  1:600969/100‑1 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGATCGAGCTTTATACGGTGCAGGAAGAgg                                                    <  2:1769906/100‑1 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  1:166523/1‑100 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  1:2145927/1‑100 (MQ=255)

                                                 gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                                    >  2:2611836/1‑100 (MQ=255)

                                                  tgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGa                                                   <  2:250902/100‑1 (MQ=255)

                                                   ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGGGGAt                                                  >  2:810719/1‑100 (MQ=255)

                                                     aaGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCTTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaa                                                <  2:2055503/100‑1 (MQ=255)

                                                        aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                             >  1:2421092/1‑100 (MQ=255)

                                                        aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                                             <  1:1649820/100‑1 (MQ=255)

                                                         tGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTTATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAcc                                            <  2:1362523/100‑1 (MQ=255)

                                                           cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                                          >  2:2490488/1‑100 (MQ=255)

                                                           cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                                          >  2:1593432/1‑100 (MQ=255)

                                                           cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                                          >  1:836601/1‑100 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAACACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         >  1:680900/1‑100 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         <  2:1885165/100‑1 (MQ=255)

                                                            gATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTg                                         >  2:1837076/1‑100 (MQ=255)

                                                             aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                        >  1:2246425/1‑100 (MQ=255)

                                                             aTTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTgg                                        >  2:672862/1‑100 (MQ=255)

                                                               tCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTAGACGGTGCAGGAAGAGGATAAAACCGTGGAg                                      >  1:2899679/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  1:637744/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  1:253568/1‑100 (MQ=255)

                                                                cGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGc                                     >  2:1228801/1‑100 (MQ=255)

                                                                 gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    >  2:1016598/1‑100 (MQ=255)

                                                                 gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    >  1:915373/1‑100 (MQ=255)

                                                                 gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                                    <  1:1195946/100‑1 (MQ=255)

                                                                  ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCgg                                   >  1:2900380/1‑100 (MQ=255)

                                                                   cAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGa                                  >  1:1046640/1‑100 (MQ=255)

                                                                      aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAAc                               <  2:285305/100‑1 (MQ=255)

                                                                      aGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTGTATACGGTGCAGGAAGAGGATAAAACCGAGGAGCGGAAAc                               >  1:774004/1‑100 (MQ=255)

                                                                       gTACCAGCGGGCCGCAAAAACTCGTTGGGccgctggtgctttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccg                              <  1:1555548‑M2/100‑72 (MQ=255)

                                                                        tACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa                             >  1:755749/1‑100 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaa                            <  1:765017‑M2/100‑74 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgcgacggtaatcagcacgttcgacaatcacctgccgaa                            <  1:748118‑M2/100‑74 (MQ=255)

                                                                         aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa                            >  2:502773/1‑100 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  1:1112688‑M2/100‑75 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat                           <  1:1656719‑M2/100‑75 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg                           >  1:1711085/1‑100 (MQ=255)

                                                                          ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg                           >  1:766987/1‑100 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatc                          <  2:1297087‑M2/100‑76 (MQ=255)

                                                                           cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt                          <  2:681317/100‑1 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt                        <  2:1090046/100‑1 (MQ=255)

                                                                             gCGGGCCGCAAAAACTCGTTAGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtat                        >  1:1770224/1‑98 (MQ=255)

                                                                               gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTa                      <  1:1267604/100‑1 (MQ=255)

                                                                                ggCCGCAAAAACTCGTTGGGCCGCTCATCGCCATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt                     <  1:2470064/100‑1 (MQ=255)

                                                                                  ccGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                   >  1:2296347/1‑100 (MQ=255)

                                                                                   cGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCa                  >  2:1743895/1‑100 (MQ=255)

                                                                                   cGCAAAAACTCGTTGGGCCGCTCAACGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATcc                   <  1:347799/99‑1 (MQ=255)

                                                                                         aaCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTg            <  1:2418126/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:2455742/100‑1 (MQ=255)

                                                                                          aCTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:2390964/100‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTgg           <  2:2407985/99‑1 (MQ=255)

                                                                                           cTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          >  1:434663/1‑100 (MQ=255)

                                                                                            tCGTTGGGCCGCTCATCGCTATTCCTGTGAGCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGt          <  1:1958448/99‑1 (MQ=255)

                                                                                            tCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGtt         >  2:1040088/1‑100 (MQ=255)

                                                                                            tCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGtt         <  2:166524/100‑1 (MQ=255)

                                                                                             gatctggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTa        <  2:836840/95‑1 (MQ=255)

                                                                                              gTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAc       >  2:572423/1‑100 (MQ=255)

                                                                                               ttGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTAcc      >  1:145625/1‑100 (MQ=255)

                                                                                                tGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCt     <  2:629367/100‑1 (MQ=255)

                                                                                                tGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGGTTTATCCATTTTTGGTTACCt     >  1:2113932/1‑100 (MQ=255)

                                                                                                  ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTaagatc   >  1:836838/1‑95 (MQ=255)

                                                                                                  ggCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTg    >  1:559292/1‑99 (MQ=255)

                                                                                                   gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  2:2899538/1‑100 (MQ=255)

                                                                                                   gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  >  1:1988957/1‑100 (MQ=255)

                                                                                                   gCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAg  <  1:2519505/100‑1 (MQ=255)

                                                                                                   gCCGCTCATCGCGCTTCCTGTGACCGAGCTTTATACGGTCCAGGCCGAGGATCAACCCGTGGCGCGGGCACGAAGTTTTATCCATTTTCGGTTACTTg    >  1:379666/1‑98 (MQ=255)

AATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAG  >  NC_000913/4638249‑4638447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.