New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 120955345 (0.430)6 (0.060) 6/162 NT 20.4% pseudogene (67/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
?NC_000913 = 1209584 6 (0.060)pseudogene (36/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

AGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAA  >  NC_000913/1209485‑1209683
                                                                                                   |                                                                                                   
aGCCTTTGTCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGaca                                                                                                     >  1:2666727/1‑100 (MQ=255)
aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGaca                                                                                                     >  2:2469981/1‑100 (MQ=255)
aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGaca                                                                                                     >  2:2254356/1‑100 (MQ=255)
aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGaca                                                                                                     <  1:860689/100‑1 (MQ=255)
 gCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAc                                                                                                    <  2:1835421‑M2/100‑2 (MQ=255)
    tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGACTGAAGGCCACGGAACCGGGACAccaa                                                                                                 <  1:2110429‑M2/100‑5 (MQ=255)
      tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaaca                                                                                               >  2:1517677‑M2/1‑94 (MQ=255)
      tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaaca                                                                                               >  2:697384‑M2/1‑94 (MQ=255)
       gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacag                                                                                              <  2:2090968‑M2/100‑8 (MQ=255)
       gCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacag                                                                                              <  2:1860006‑M2/100‑8 (MQ=255)
        ccAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacagg                                                                                             >  2:2009555‑M2/1‑92 (MQ=255)
         cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGt                                                                                            <  2:1121511/100‑1 (MQ=255)
          aGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTa                                                                                           <  2:924277/100‑1 (MQ=255)
           gTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTaa                                                                                          >  2:459351/1‑100 (MQ=255)
            ttCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAAt                                                                                         <  1:1451241/100‑1 (MQ=255)
               cGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCa                                                                                      <  1:2001093/100‑1 (MQ=255)
                gggTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCag                                                                                     >  2:2060127/1‑100 (MQ=255)
                   tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                  >  1:2834100‑M2/1‑99 (MQ=255)
                   tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                  >  2:2586185‑M2/1‑99 (MQ=255)
                   tATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGc                                                                                  >  2:39245‑M2/1‑99 (MQ=255)
                    aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGGCAGCCGGCTGGCAGAGTGGCTGAAGGACACGGAACCGGGACACCAACAGGTAATGCaga                                                                                    <  1:858667/97‑1 (MQ=255)
                    aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcc                                                                                 >  2:1815084‑M2/1‑98 (MQ=255)
                    aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcc                                                                                 >  2:2780731‑M2/1‑98 (MQ=255)
                    aTTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcc                                                                                 <  1:1122181‑M2/100‑3 (MQ=255)
                       cttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttc                                                                              <  1:749414‑M2/100‑6 (MQ=255)
                          cagcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcc                                                                           >  1:680077‑M2/1‑92 (MQ=255)
                           agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccc                                                                          <  2:473780‑M2/100‑10 (MQ=255)
                           agcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccc                                                                          >  1:2677796‑M2/1‑91 (MQ=255)
                           agcagAAAAAGCGGCACCATGGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccc                                                                          >  1:1730377‑M2/1‑91 (MQ=255)
                            gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                         <  1:1635005‑M2/100‑11 (MQ=255)
                            gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                         <  2:2698746‑M2/100‑11 (MQ=255)
                            gcagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccca                                                                         <  1:1220147‑M2/100‑11 (MQ=255)
                             cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaa                                                                        <  1:416819‑M2/100‑12 (MQ=255)
                             cagAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaa                                                                        <  1:1756709‑M2/100‑12 (MQ=255)
                                 aaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaacca                                                                    <  2:1461794‑M2/100‑16 (MQ=255)
                                   aaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaag                                                                  >  2:2146156‑M2/1‑83 (MQ=255)
                                     gCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGt                                                                >  1:2218709/1‑100 (MQ=255)
                                      cGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggtt                                                               >  2:1196641‑M2/1‑80 (MQ=255)
                                         cACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttc                                                            <  2:1198706‑M2/100‑24 (MQ=255)
                                           ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcga                                                          >  1:2732067‑M2/1‑75 (MQ=255)
                                           ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcga                                                          <  2:1101915‑M2/100‑26 (MQ=255)
                                            cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                         >  1:63332‑M2/1‑74 (MQ=255)
                                            cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                         <  2:1099398‑M2/100‑27 (MQ=255)
                                            cATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgag                                                         >  2:2201173‑M2/1‑74 (MQ=255)
                                             aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                        >  1:329287‑M2/1‑73 (MQ=255)
                                              ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagag                                                       >  1:722149‑M2/1‑72 (MQ=255)
                                               tGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagc                                                      <  2:1673835‑M2/100‑30 (MQ=255)
                                                gCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcc                                                     <  2:2848366‑M2/100‑31 (MQ=255)
                                                 cATTTCAGCCAGCCTGTTGGCGGCGTGGCTGAAGGCCACGGAACCGGGACAccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaat                                                    <  1:1142875‑M2/100‑50 (MQ=255)
                                                 cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccg                                                    >  2:1164353‑M2/1‑69 (MQ=255)
                                                  aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGTAATGCAGAGccttctcccaaaccacggttttcgagagccgt                                                   <  1:2749138‑M2/100‑33 (MQ=255)
                                                  aTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                   <  1:358118‑M2/100‑33 (MQ=255)
                                                     tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                                >  2:123535‑M2/1‑65 (MQ=255)
                                                     tCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttg                                                <  2:1617226‑M2/100‑36 (MQ=255)
                                                      cagccagcCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgc                                               >  2:2213974‑M2/1‑64 (MQ=255)
                                                       agccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                                              <  2:1362246‑M2/100‑56 (MQ=255)
                                                        gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                             >  1:1101913‑M2/1‑62 (MQ=255)
                                                        gccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcac                                             <  1:1104992‑M2/100‑39 (MQ=255)
                                                         ccagccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                            <  2:200612‑M2/100‑58 (MQ=255)
                                                           agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                                          <  2:837340‑M2/100‑60 (MQ=255)
                                                           agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                          >  2:49192‑M2/1‑59 (MQ=255)
                                                           agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagt                                          <  1:2074909‑M2/100‑42 (MQ=255)
                                                            gccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtg                                         >  1:1471479‑M2/1‑58 (MQ=255)
                                                             cgatctggcggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgc                                        >  2:1598021‑M2/6‑57 (MQ=255)
                                                              cTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcc                                       <  1:45145‑M2/100‑45 (MQ=255)
                                                               tGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggca                                      <  1:2424945‑M2/100‑64 (MQ=255)
                                                                  tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatcc                                   <  2:2752099‑M2/100‑49 (MQ=255)
                                                                   ggCGGAGTGGCTGAAGGCCACGGAACCGGGACAccaacaggcgggctgaaatgcaatggtgccgctttttctgctgcagaatacccggcactggcaaag                                   <  1:1630354‑M2/99‑67 (MQ=255)
                                                                   ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                  <  1:1858396‑M2/100‑50 (MQ=255)
                                                                   ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccg                                  <  2:890402‑M2/100‑50 (MQ=255)
                                                                   ggCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgcagatcg                                  <  1:1598017‑M2/100‑50 (MQ=255)
                                                                      ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatt                               <  2:1614301‑M2/100‑53 (MQ=255)
                                                                       gAGTGGCTGAAGGCCACGGAACTGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgattt                              >  2:1220496‑M2/1‑47 (MQ=255)
                                                                         gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                            <  1:513036‑M2/100‑56 (MQ=255)
                                                                         gTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttga                            >  1:355234‑M2/1‑45 (MQ=255)
                                                                           ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                          <  1:71635‑M2/100‑58 (MQ=255)
                                                                           ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                          <  2:1004769‑M2/100‑58 (MQ=255)
                                                                           ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                          >  2:669905‑M2/1‑43 (MQ=255)
                                                                           ggCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgagttgata                          >  1:379473‑M2/1‑43 (MQ=255)
                                                                            gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatat                         <  2:2779405‑M2/100‑59 (MQ=255)
                                                                                aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcc                     >  2:2666738‑M2/1‑38 (MQ=255)
                                                                                aaGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgcc                     >  2:1213114‑M2/1‑38 (MQ=255)
                                                                                  ggCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCGTCATTCCTGCtt                   >  2:1144539/1‑100 (MQ=255)
                                                                                    ccACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaac                 >  1:2543243‑M2/1‑34 (MQ=255)
                                                                                     cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCGTCATTCCTGCTTTTa                <  1:1144537/100‑1 (MQ=255)
                                                                                       cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacgga              >  1:170246‑M2/1‑31 (MQ=255)
                                                                                         gAACCGGGAGACCAACAGGTAATGCAGAGcgttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggatt            >  2:94419‑M2/1‑29 (MQ=255)
                                                                                           aCCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattct          <  2:1883374‑M2/100‑74 (MQ=255)
                                                                                             cGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttg        >  2:1104994‑M2/1‑25 (MQ=255)
                                                                                              gggACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgc       <  1:449091‑M2/100‑77 (MQ=255)
                                                                                                gACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcgg     >  2:1937729‑M2/1‑22 (MQ=255)
                                                                                                   acCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggctt  <  1:228508‑M2/100‑82 (MQ=255)
                                                                                                   acCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttccggctt  <  1:229626‑M2/100‑82 (MQ=255)
                                                                                                   |                                                                                                   
AGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAA  >  NC_000913/1209485‑1209683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.