| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,028 | T→C | 20.9% | intergenic (‑238/+70) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,028 | 0 | T | C | 20.9% | 393.5 / 101.4 | 202 | intergenic (‑238/+70) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (79/75); new base C (37/3); total (124/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.19e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 | |||||||||||
Only 100 of 207 total aligned reads displayed.
ATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAT > NC_000913/3705930‑3706126 | ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAt‑t‑‑‑t > 1:783393/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑g > 2:1486724/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑g < 1:1070657/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑Gt < 1:1056153/100‑1 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑Gt < 2:1101458/100‑1 (MQ=255) aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAg > 2:2234618/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGcc > 1:2088129/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGAt < 1:1023825/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATa > 1:2423367/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGa > 1:1134315/1‑100 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAg < 1:2875506/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAg < 1:2282282/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GACT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgc > 1:2112048/1‑100 (MQ=255) attttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAgcgc > 2:796438/10‑100 (MQ=18) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCa > 2:582712/1‑100 (MQ=255) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCAt > 2:1362652/8‑100 (MQ=18) ttcgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCGTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCAt > 2:2311783/8‑100 (MQ=18) gatctggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑C‑‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATc < 2:1402921/94‑1 (MQ=18) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc < 1:2447633/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 2:501784/1‑100 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCaa > 1:1706789/5‑99 (MQ=18) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:621294/4‑100 (MQ=17) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg > 2:2291973/4‑100 (MQ=21) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAgg > 2:739538/4‑100 (MQ=25) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CCAT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2519674/4‑100 (MQ=21) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGCA‑CCAT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg < 1:1396944/97‑1 (MQ=21) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:2882801/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGGGC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1880716/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGCATGGGC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2129657/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1492369/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GGAT‑A‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:150656/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAACCGCGCAAATTCAATATATTGCG‑GAGA‑A‑‑‑AAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGct > 1:2602641/3‑99 (MQ=21) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:885089/3‑100 (MQ=18) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc < 2:199529/100‑1 (MQ=255) ggctggataaggcgTTCACGCCGCATCCAGCCTAC‑AAAATTGTGCAAAATCAATGGATTGCA‑CAGC‑T‑‑‑AGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1699792/11‑100 (MQ=25) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑C‑‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAgatc > 1:1402919/2‑97 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2211422/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1882686/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 2:2906945/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑A‑‑‑TTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 2:1764218/1‑99 (MQ=25) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:2513525/1‑99 (MQ=21) gCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:39523/1‑100 (MQ=18) ccggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:191299/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TGAG‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:561257/9‑98 (MQ=17) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGCGCGCATCAGGCAt > 2:1286012/1‑99 (MQ=255) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:1448217/1‑100 (MQ=255) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:849248/1‑100 (MQ=255) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagtt > 2:2153981/8‑97 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:300180/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2682618/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2761803/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGAA‑GAGA‑T‑‑‑AAT‑‑GTAGGCCTGATAAGCGTAGCGAATCAGGCAattt > 1:2273190/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑T‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAttta > 1:754814/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCATAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:1835503/7‑100 (MQ=17) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt > 1:1187139/6‑100 (MQ=17) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAATGTGCAAATTCAATAAATTGC‑‑‑AAT‑TCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCAattt > 2:2020099/6‑100 (MQ=21) gATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt > 2:1616832/1‑100 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttttt > 1:1390426/1‑98 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:1207848/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:1906928/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:2413054/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 1:1933571/100‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:2587543/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg > 2:1394979/1‑100 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg < 1:2565758/100‑1 (MQ=255) tcttccgatcTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCt < 2:2529070/91‑1 (MQ=255) aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:595569/100‑1 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:1107766/100‑1 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 2:2403941/100‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg > 1:184531/1‑100 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 1:1630879/100‑1 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt < 2:2215027/100‑1 (MQ=255) aaaaaTCGTGCAAATTCGATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GGAGGCCTGAGAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt < 1:2866558/98‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:442784/100‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 1:882415/100‑1 (MQ=255) aaTCGTGCAAATTCGATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:2845744/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 2:2359571/100‑1 (MQ=255) cGTGCAAATTCAATACATTGAA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCACTCAGTCTTGTATGGCTTTTAatta > 1:1669999/1‑99 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 1:1800363/1‑100 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:289808/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:447849/100‑1 (MQ=255) cAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 2:1646894/1‑100 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 1:904804/100‑1 (MQ=255) ttCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 1:472378/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:1982896/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:2120267/100‑1 (MQ=255) ttGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTCTTTTTTATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc > 1:268705/1‑100 (MQ=38) ttGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc < 2:1714930/100‑1 (MQ=255) ttGCA‑GAAG‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGTCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc < 1:2367949/100‑1 (MQ=255) gCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCTTTTGCTATCAACCTTGTATGGCTTTTAATTATTTGATAGAGACGTTTTCg > 1:2033390/1‑99 (MQ=37) gCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 2:184533/100‑1 (MQ=255) cA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:424421/1‑100 (MQ=255) a‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:380804/100‑1 (MQ=255) a‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 1:1521932/100‑1 (MQ=255) a‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:878482/100‑1 (MQ=255) gAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg > 1:615295/1‑99 (MQ=255) gAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCAATCAGTCCTGTATGGCTTTTAATTATTCGATAGACACGCTTTCGacg > 1:2334003/1‑97 (MQ=37) aT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 2:1199984/99‑1 (MQ=255) aT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa < 1:2010649/100‑1 (MQ=255) t‑t‑‑‑ttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt > 1:1198630/1‑100 (MQ=37) | ATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAT > NC_000913/3705930‑3706126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |