Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 4,488,027 | A→G | 75.9% | D237G (GAC→GGC) | lptG → | lipopolysaccharide export ABC permease |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,488,027 | 0 | A | G | 75.9% | 255.5 / 73.3 | 136 | D237G (GAC→GGC) | lptG | lipopolysaccharide export ABC permease |
Reads supporting (aligned to +/- strand): ref base A (17/16); new base G (53/50); total (70/66) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
GGCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCG > NC_000913/4487928‑4488122 | ggCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGa > 1:814693/1‑100 (MQ=255) ggCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGa > 1:1613625/1‑100 (MQ=255) tGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACt > 1:214171/1‑100 (MQ=255) gTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTg > 1:1507048/1‑100 (MQ=255) gTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTg > 1:1611682/1‑100 (MQ=255) ngTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 1:2346306/2‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 2:586413/1‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 1:1354289/1‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 2:1292769/1‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 2:56522/1‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg > 1:2817237/1‑100 (MQ=255) ggTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtg < 2:392016/100‑1 (MQ=255) gTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtgg > 1:2373272/1‑100 (MQ=255) gTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCgtgg < 2:2253436/100‑1 (MQ=255) ttGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCgtggt < 2:1421613/100‑1 (MQ=255) tgatgaATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCgtggtg < 2:251338/100‑1 (MQ=255) atgaATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGgc > 2:1326392/1‑100 (MQ=255) tgaATCTGATCTGACCAATCCGAAACAGCTTACCGGTTCGCAGACGTTGAGCGGGACCGGGCAAACCAACCTCACGCCGGGCAAACTAGGCgtggtcg > 1:898412/1‑96 (MQ=255) tgaATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCCGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGgcg > 1:2557064/1‑100 (MQ=255) gaATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGgcgc > 1:2875732/1‑100 (MQ=255) aaTCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCt < 1:748441/100‑1 (MQ=255) atctgatctgACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGTACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTg < 1:2545145/100‑1 (MQ=255) tgatctgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGAc > 1:2806993/1‑100 (MQ=255) tgatctgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGAc > 2:2340793/1‑100 (MQ=255) gatctgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGAcc > 1:1506482/1‑100 (MQ=255) ctgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCgg > 2:960225/1‑100 (MQ=255) tgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGa < 2:2373283/100‑1 (MQ=255) tgaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGa > 1:423600/1‑100 (MQ=255) gaCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCGGGAt > 2:870589/1‑100 (MQ=255) aCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATg < 2:2383020/100‑1 (MQ=255) aCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATg < 2:2604448/100‑1 (MQ=255) aCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATg > 1:2562199/1‑100 (MQ=255) aCCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATg < 1:1536991/100‑1 (MQ=255) ccAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGc > 1:2293700/1‑100 (MQ=255) ccAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGCCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGc > 1:76635/1‑100 (MQ=255) cAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCa > 1:1380103/1‑100 (MQ=255) aaTCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCAc > 2:2064421/1‑100 (MQ=255) ccGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActct > 2:2726999/1‑100 (MQ=255) cGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctc < 2:470681/100‑1 (MQ=255) cGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctc > 2:84741/1‑100 (MQ=255) gAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctct < 2:1354291/100‑1 (MQ=255) gAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctct > 2:493950/1‑100 (MQ=255) gAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctct > 1:144141/1‑100 (MQ=255) gAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCActctct < 2:22326/100‑1 (MQ=255) cAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATc < 1:1058550/99‑1 (MQ=255) aGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCGGGATGCACTCTCTATCAg < 1:870587/100‑1 (MQ=255) aGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAg < 2:484174/100‑1 (MQ=255) gATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGc < 1:1098819/100‑1 (MQ=255) gATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGc > 2:1845185/1‑100 (MQ=255) aTTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCg < 2:1141566/100‑1 (MQ=255) ccGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGttt > 2:1254769/1‑100 (MQ=255) ccGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGttt > 2:1644762/1‑100 (MQ=255) cGGTTCGCAGACGGTGAGCGGCACCTGGAAACCCAACCTCCCGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTg < 2:858090/100‑1 (MQ=255) ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGc > 1:1325535/1‑100 (MQ=255) ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGc < 1:650781/100‑1 (MQ=255) ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGc < 1:2811728/100‑1 (MQ=255) ggTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGc > 1:2742518/1‑100 (MQ=255) ttCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGcac < 1:907252/100‑1 (MQ=255) cGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGcaca < 1:2033030/99‑1 (MQ=255) cGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGcaca > 2:277159/1‑99 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc < 2:551877/100‑1 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc < 1:784778/100‑1 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc < 2:1611686/100‑1 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc > 1:790622/1‑100 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc > 2:920165/1‑100 (MQ=255) gCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAAc < 2:1301208/100‑1 (MQ=255) aGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTa < 2:1365634/100‑1 (MQ=255) aCGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTAtg < 1:1263067/100‑1 (MQ=255) aCGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTAtg < 1:557799/100‑1 (MQ=255) gCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTa < 2:1406558/100‑1 (MQ=255) aCCTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGa < 1:1673412/100‑1 (MQ=255) ccTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGaa < 2:1983081/100‑1 (MQ=255) ccTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGaa > 2:405804/1‑100 (MQ=255) cTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAg < 1:663146/100‑1 (MQ=255) cTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAg > 2:1068186/1‑100 (MQ=255) cTGGAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAg > 2:2752137/1‑100 (MQ=255) tGGAAAACCAACCTCACGCCGGGCAAACTGGTCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGt < 2:1980279/100‑1 (MQ=255) tGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGt > 2:2315047/1‑100 (MQ=255) tGGAAAACCAACATCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACTCGGAGGCACACTATATCAGCGGGATGCACAACTATGTGAAGGATATGAAg > 1:2691261/1‑99 (MQ=255) ggAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTc < 1:2307939/100‑1 (MQ=255) gAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCg > 1:2115679/1‑100 (MQ=255) gAAAACCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCg < 1:2197028/100‑1 (MQ=255) aaaCCAACCTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCAATCTCTATCAGCGGGTTGCACAACTATGTGAAGTATCTGAAGTCGAg > 1:2078071/1‑100 (MQ=255) aaaCCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAg < 2:2453610/100‑1 (MQ=255) aaccaaccTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGc < 1:2105000/100‑1 (MQ=255) accaaccTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCg > 2:1842077/1‑100 (MQ=255) accaaccTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCg < 1:2905288/100‑1 (MQ=255) ccaaccTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCgg < 2:163334/100‑1 (MQ=255) ccaaccTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCgg > 1:2289121/1‑100 (MQ=255) ccaaccTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACCCTCTATCAGCGGTTTGCACAACTCTGTGAAGTATCTGAAGTCGAg > 1:1648691/1‑97 (MQ=255) accTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCa > 1:1399069/1‑100 (MQ=255) ccTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAg > 2:626603/1‑100 (MQ=255) ccTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAg > 2:626731/1‑100 (MQ=255) cTCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGTACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAg < 1:1896547/99‑1 (MQ=255) tCACGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGa > 2:2331425/1‑100 (MQ=255) tCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGGAGTATCTGACGTCGAGCGGTGAgca > 1:2766240/1‑98 (MQ=255) cGCCGGGCAAACTGGTGTTGGTGGCGCTGGTCTCGGATGCACTCTCTATCCGCGGTTTGAACATCTCTGTTAAGTTTCTGAAGt < 1:2004455/84‑1 (MQ=255) cGCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGc > 1:1222020/1‑100 (MQ=255) gCCGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGcc > 2:1883069/1‑100 (MQ=255) ccGGGCAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCg < 1:2893915/100‑1 (MQ=255) | GGCGTCTGTCGCAGGTTGATGAATCTGATCTGACCAATCCGAAACAGATTACCGGTTCGCAGACGGTGAGCGGCACCTGGAAAACCAACCTCACGCCGGACAAACTGGGCGTGGTGGCGCTGGACCCGGATGCACTCTCTATCAGCGGTTTGCACAACTATGTGAAGTATCTGAAGTCGAGCGGTCAGGATGCCG > NC_000913/4487928‑4488122 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |