Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,032,336 G→C 17.8% intergenic (‑19/+48) dcm ← / ← yedJ DNA cytosine methyltransferase/putative HD superfamily phosphohydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,032,3360GC17.8% 321.4 / 58.6 123intergenic (‑19/+48)dcm/yedJDNA cytosine methyltransferase/putative HD superfamily phosphohydrolase
Reads supporting (aligned to +/- strand):  ref base G (57/44);  new base C (12/10);  total (69/54)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 125 total aligned reads displayed.

AATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCAT  >  NC_000913/2032237‑2032433
                                                                                                   |                                                                                                 
aaTTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTg                                                                                                   <  1:1429375/100‑1 (MQ=255)
     gcagcaGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATg                                                                                              >  2:210030/1‑100 (MQ=255)
      cagcagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATgg                                                                                             >  2:315331/1‑100 (MQ=255)
         cagTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCg                                                                                          <  2:1117802/100‑1 (MQ=255)
          agTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCgg                                                                                         <  1:1895664/100‑2 (MQ=255)
          agTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCgg                                                                                         <  2:2825661/100‑2 (MQ=255)
           gTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGAc                                                                                        <  1:584967/100‑1 (MQ=255)
           gTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGAc                                                                                        >  1:1982577/1‑100 (MQ=255)
           gTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggt                                                                                        <  2:426320/100‑3 (MQ=255)
           gTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggt                                                                                        <  2:517661/100‑3 (MQ=255)
           gTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggt                                                                                        <  1:2418959/100‑3 (MQ=255)
             ttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAg                                                                                      <  1:2298515/100‑1 (MQ=255)
             ttCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACAGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAg                                                                                      >  1:36822/1‑100 (MQ=255)
               ctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGt                                                                                    >  1:1393976/1‑100 (MQ=255)
               ctcCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCAAAGATTTCACCGGCCATCTGAGATGGCCGACAGGt                                                                                    >  2:90772/1‑100 (MQ=255)
                tcCAGCATTGGCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtgaaa                                                                                    <  1:78780/99‑7 (MQ=39)
                 ccAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTa                                                                                  >  2:758269/1‑100 (MQ=255)
                 ccAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTCAGATGGCCggtgaaat                                                                                   <  1:1669015/99‑8 (MQ=39)
                  cAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTaa                                                                                 <  2:1165305/100‑1 (MQ=255)
                   aGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAAc                                                                                <  2:2521693/100‑1 (MQ=255)
                   aGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAAc                                                                                <  2:1883158/100‑1 (MQ=255)
                    gCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGGTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACa                                                                               >  2:1366518/1‑100 (MQ=255)
                       ttGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATaa                                                                            <  2:1552924/100‑1 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                          >  1:1104279/1‑100 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                          >  1:607387/1‑100 (MQ=255)
                         gCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAAtt                                                                          >  1:1755905/1‑100 (MQ=255)
                            tgtgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACa                                                                       >  2:2404745/1‑100 (MQ=255)
                            tgtgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACa                                                                       <  1:2414920/100‑1 (MQ=255)
                             gtgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAg                                                                      <  2:945381/100‑1 (MQ=255)
                              tgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGc                                                                     <  2:773845/100‑1 (MQ=255)
                              tgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGc                                                                     >  2:225931/1‑100 (MQ=255)
                              tgCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGc                                                                     >  2:1802913/1‑100 (MQ=255)
                              tgCGGCATTCCCGGTGCTGTATGAAGCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGc                                                                     <  2:1104281/100‑1 (MQ=255)
                               gCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                    >  2:2502811/1‑100 (MQ=255)
                               gCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                    >  1:457861/1‑100 (MQ=255)
                               acGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGcc                                                                    >  1:2780445/2‑100 (MQ=255)
                                   cATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCAttt                                                                >  1:2247845/1‑100 (MQ=255)
                                     ttCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAg                                                              <  2:83339/100‑1 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAggg                                                            <  1:950840/100‑1 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAggg                                                            <  2:2640328/100‑1 (MQ=255)
                                       cccGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAggg                                                            >  1:655908/1‑100 (MQ=255)
                                           gTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTGCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGcc                                                          <  1:959477/98‑1 (MQ=255)
                                           gTGCTGTATGAATCGGTTACTGATATATTTTCCTACATAGATTTCAACGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAgg                                                             <  1:236680/95‑1 (MQ=255)
                                            tGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCAcg                                                       <  2:1584079/100‑1 (MQ=255)
                                             gCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCAcgc                                                      >  2:606712/1‑100 (MQ=255)
                                              cTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCAcgcg                                                     >  1:887655/1‑100 (MQ=255)
                                               tGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACgcgc                                                    >  2:2276968/1‑100 (MQ=255)
                                                gTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCt                                                   >  1:1089852/1‑100 (MQ=255)
                                                gTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCt                                                   >  1:919152/1‑100 (MQ=255)
                                                 tATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTc                                                  >  2:2018268/1‑100 (MQ=255)
                                                 tATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGACCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTc                                                  >  1:1346721/1‑100 (MQ=255)
                                                  aTGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTca                                                 <  1:1399596/100‑1 (MQ=255)
                                                  aTGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTca                                                 <  1:2329405/100‑1 (MQ=255)
                                                  aTGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTca                                                 >  2:2562935/1‑100 (MQ=255)
                                                        cGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTcagccagc                                           <  2:655909/100‑1 (MQ=255)
                                                         ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCg                                          <  1:1417912/100‑1 (MQ=255)
                                                         ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCg                                          <  2:376931/100‑1 (MQ=255)
                                                         ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCg                                          >  1:128325/1‑100 (MQ=255)
                                                         ggTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCg                                          <  1:2016534/100‑1 (MQ=255)
                                                          gTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCgg                                         >  1:2479002/1‑100 (MQ=255)
                                                              cTGATATATTTTCCTGCATAGATTTCACCGGCCTTCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGa                                     >  1:1177844/1‑100 (MQ=255)
                                                               tGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGaa                                    <  2:1492339/100‑1 (MQ=255)
                                                               tGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGaa                                    <  1:1280743/100‑1 (MQ=255)
                                                                gATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGaaa                                   >  2:749360/1‑100 (MQ=255)
                                                                gATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGaaa                                   <  2:1956713/100‑1 (MQ=255)
                                                                  tatatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAAc                                 <  1:2140684/100‑1 (MQ=255)
                                                                  tatatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAAc                                 >  2:28063/1‑100 (MQ=255)
                                                                   atatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACg                                >  2:1700316/1‑100 (MQ=255)
                                                                   atatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACg                                >  2:1087449/1‑100 (MQ=255)
                                                                    tatTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGc                               >  1:1337839/1‑100 (MQ=255)
                                                                       tttCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATc                            <  2:1599751/100‑1 (MQ=255)
                                                                           cTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATc                        >  1:2377635/1‑100 (MQ=255)
                                                                           cTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATc                        <  1:934095/100‑1 (MQ=255)
                                                                             gCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCAc                      <  1:225929/100‑1 (MQ=255)
                                                                              cATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCAcc                     >  1:407778/1‑100 (MQ=255)
                                                                               aTAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCt                    >  1:2181167/1‑100 (MQ=255)
                                                                                tAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCtt                   >  2:2680106/1‑100 (MQ=255)
                                                                                tAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCtt                   >  2:1383250/1‑100 (MQ=255)
                                                                                  gATTTCACCGGCCATCTGGGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtgt                 <  1:2164233/100‑1 (MQ=255)
                                                                                  gATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTtgt                 >  2:2176101/1‑100 (MQ=255)
                                                                                    tttCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGa               >  2:2133591/1‑100 (MQ=255)
                                                                                    acctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGa               >  1:1544770/7‑100 (MQ=255)
                                                                                      tCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATc             <  1:315329/100‑1 (MQ=255)
                                                                                      ctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGa               >  1:1176488/5‑98 (MQ=255)
                                                                                      ctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATc             >  2:1821423/5‑100 (MQ=255)
                                                                                      ctgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATc             >  2:1379042/5‑100 (MQ=255)
                                                                                       tgtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            >  1:1893854/4‑100 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            <  2:88899/100‑1 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            <  2:2656955/100‑1 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            >  2:1781758/1‑100 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            >  1:62389/1‑100 (MQ=255)
                                                                                       cACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCg            <  2:2377646/100‑1 (MQ=255)
                                                                                        gtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGa           >  2:2711333/3‑100 (MQ=255)
                                                                                        gtcGGCCATCTCAGATGGCCGACAGGTTAACATAATTACAGCCACTAAGGGCCACGCGCTCAGCCAGCGGATGAAACCGCATCTATCACCTCGTGTTCGa           >  1:60163/3‑100 (MQ=255)
                                                                                         ccGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGac          >  1:2506038/1‑100 (MQ=255)
                                                                                          cGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAATACGCATCTATCACCTTGTGATCGaca         <  2:1771018/100‑1 (MQ=255)
                                                                                          cGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGaca         >  1:830951/1‑100 (MQ=255)
                                                                                                tCTGAGATGGCCGACAGGTTAACATAGTTACCGCCATTTAGTCCCACGCGCTCAGCCAGCCGATCAAAACGCATCTATCACCTTGTGATCGCCCCCTTCa   <  1:2610398/100‑1 (MQ=255)
                                                                                                tCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCa   >  1:2189564/1‑100 (MQ=255)
                                                                                                 cTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGACGAAAACGCATCTATCACCTTGTGATCGACACCTTCAt  <  1:1556095/100‑1 (MQ=255)
                                                                                                   |                                                                                                 
AATTTGCAGCAGTTTCTCCAGCATTGCCTGTGCGGCATTCCCGGTGCTGTATGAATCGGTTACTGATATATTTTCCTGCATAGATTTCACCGGCCATCTGAGATGGCCGACAGGTTAACATAATTACAGCCATTTAGGGCCACGCGCTCAGCCAGCGGATGAAAACGCATCTATCACCTTGTGATCGACACCTTCAT  >  NC_000913/2032237‑2032433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: