Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,800,519 T→G 15.5% intergenic (+44/‑204) ygaM → / → nrdH putative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,800,5190TG15.5% 289.5 / 51.9 122intergenic (+44/‑204)ygaM/nrdHputative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein
Reads supporting (aligned to +/- strand):  ref base T (62/41);  new base G (9/10);  total (71/51)
Fisher's exact test for biased strand distribution p-value = 3.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.04e-02

Only 100 of 123 total aligned reads displayed.

CAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATTGT  >  NC_000913/2800420‑2800616
                                                                                                   |                                                                                                 
cagcagCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGt                                                                                                   >  1:1386549/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:2733690/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 <  1:388468/100‑1 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:476609/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:476821/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:205711/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:852012/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:1603500/1‑100 (MQ=255)
    agcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTc                                                                                               <  2:1802844/100‑1 (MQ=255)
    agcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTc                                                                                               >  1:1877040/1‑100 (MQ=255)
    agcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTc                                                                                               >  2:602139/1‑100 (MQ=255)
    agcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAAAGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTc                                                                                               >  1:311341/1‑100 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCgg                                                                                             <  1:1166082/98‑1 (MQ=255)
        gCGGGAGGGAATTTTATCGGCGCACTGTTAAGCATGCGCAAAAAAAAAAAAAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCgggg                                                                                           <  1:2138120/100‑1 (MQ=255)
         cGGTAGGTGTTCTTATCGGGGCACTGATAAGAATGCGGAAATCGTAGTGCAAAAATGATCATAAATACGGGTCTTTGACACAGAAGGCTGTCTTCggg                                                                                            <  1:1473671/98‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:1467312/100‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:431417/100‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:2084233/100‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACGGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:2441613/100‑1 (MQ=255)
          ggtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGtt                                                                                         >  2:2255167/1‑100 (MQ=255)
          ggtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGtc                                                                                         <  2:1403823/100‑2 (MQ=255)
           gtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGttt                                                                                        >  2:900495/1‑100 (MQ=255)
             aggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCt                                                                                      <  1:349682/100‑1 (MQ=255)
             aggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGtcaaa                                                                                      <  2:670101/100‑5 (MQ=38)
              ggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtt                                                                                     >  1:830838/1‑100 (MQ=255)
               gtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCttt                                                                                    >  2:870466/1‑100 (MQ=255)
                taTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtttt                                                                                   >  1:1329730/1‑100 (MQ=255)
                taTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtttt                                                                                   <  2:659878/100‑1 (MQ=255)
                  tttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTg                                                                                 <  2:2739953/100‑1 (MQ=255)
                   ttttATCGGCGCACTGTTAAGCATGCGCAAATCGTATTGCAAAAATGATAATAAATACGCGACTTTGACCCCGATGCCTGTCTTCGGAGTATCttttt                                                                                  >  1:1118102/1‑98 (MQ=255)
                    tttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGcc                                                                               <  2:2809573/100‑1 (MQ=255)
                     ttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCt                                                                              >  1:2752236/1‑100 (MQ=255)
                      tATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTCGCCTg                                                                             >  2:523293/1‑100 (MQ=255)
                       aTCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTgg                                                                            >  1:27566/1‑100 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  1:2902220/100‑1 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  2:144224/100‑1 (MQ=255)
                            cgcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                                       >  2:2093224/1‑100 (MQ=255)
                            cgcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                                       >  2:2033342/1‑100 (MQ=255)
                             gcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTCGCCTGGTGAATc                                                                      <  1:523292/100‑1 (MQ=255)
                               aCTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATcac                                                                    >  2:1592147/1‑100 (MQ=255)
                               aCTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATcac                                                                    <  1:2093217/100‑1 (MQ=255)
                                cTGCTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATcaca                                                                   >  1:2188991/1‑100 (MQ=255)
                                   ttAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaaa                                                                <  1:302574/100‑1 (MQ=255)
                                      aGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATc                                                             >  2:534608/1‑100 (MQ=255)
                                        cATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATccc                                                           >  1:2251004/1‑100 (MQ=255)
                                          tGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATccccc                                                         <  2:296467/100‑1 (MQ=255)
                                          tGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATccccc                                                         >  2:238747/1‑100 (MQ=255)
                                             gcAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTAc                                                      >  1:2435063/1‑100 (MQ=255)
                                                    gTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                               >  2:2599849/1‑100 (MQ=255)
                                                      aGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACg                                             >  2:680095/1‑100 (MQ=255)
                                                       gTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCCCGc                                            >  1:2331076/1‑100 (MQ=255)
                                                       gTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGc                                            >  2:2139049/1‑100 (MQ=255)
                                                       gTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGc                                            <  2:823838/100‑1 (MQ=255)
                                                       gTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGc                                            >  2:2743831/1‑100 (MQ=255)
                                                       gTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGAGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGc                                            >  1:2501985/1‑100 (MQ=255)
                                                        tGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGGCTGTATTCAGGGTTTCTTTTTGACTGTTGGATCACAAAAATCCCCCTATTCCGTCagg                                             >  1:1912705/1‑96 (MQ=255)
                                                        tGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCt                                           >  1:2867521/1‑100 (MQ=255)
                                                         gCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                          >  2:418523/1‑100 (MQ=255)
                                                         gCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                          >  2:953494/1‑100 (MQ=255)
                                                         gCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                          >  2:1462794/1‑100 (MQ=255)
                                                          cAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCa                                         >  2:2906324/1‑100 (MQ=255)
                                                          cAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCa                                         <  2:2740445/100‑1 (MQ=255)
                                                          cAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCa                                         >  1:2189154/1‑100 (MQ=255)
                                                          cAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCa                                         <  2:673019/100‑1 (MQ=255)
                                                           aaaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCat                                        >  2:1457507/1‑100 (MQ=255)
                                                            aaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTTTTTTTTTTTTCACAAAAATCCCCCTACCCCGTCACGCTCa                                         >  1:1366541/1‑98 (MQ=255)
                                                             aaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCatat                                      <  2:167998/100‑1 (MQ=255)
                                                              aaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATc                                     <  1:2193586/100‑1 (MQ=255)
                                                              aaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATc                                     <  2:443540/100‑1 (MQ=255)
                                                                tGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCa                                   >  1:2880257/1‑100 (MQ=255)
                                                                 gATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAg                                  <  2:1932520/100‑1 (MQ=255)
                                                                       aaataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAAt                            <  2:796708/100‑1 (MQ=255)
                                                                           aCGCGTTTTTGAACACGAAACCTGTATTCTGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCTCCTTCCCCGTCACGCTCATATCCAGGGTAATTTc                         <  1:1362001/99‑1 (MQ=255)
                                                                            cgcgTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGa                       <  2:2172681/100‑1 (MQ=255)
                                                                              cgTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGAcc                     <  1:1925842/100‑1 (MQ=255)
                                                                              cgTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGAcc                     <  2:875816/100‑1 (MQ=255)
                                                                                  agaaaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTa                 >  2:310832/5‑100 (MQ=38)
                                                                                     aaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAttt              >  2:59551/2‑100 (MQ=255)
                                                                                     aaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAttt              >  2:1668180/2‑100 (MQ=255)
                                                                                      aCCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             >  2:1007345/1‑100 (MQ=255)
                                                                                      aCCCCGAAGCCAGGCTTCGGAGTTTCTTTTTGCCTGGTGAAGCACACAAATCCCCCTACCCCGTCACGCTCACATCCAGGGTAATTTCCACCACTACTTg             >  1:1248268/1‑100 (MQ=255)
                                                                                      aCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             >  1:1787163/1‑100 (MQ=255)
                                                                                       tccgatctccTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  2:1069412/92‑1 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:106993/1‑100 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  1:101676/100‑1 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  2:291683/100‑1 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCCTATCCAGGGTAATTTCGACCACTATTTGc            >  2:2202898/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  1:2560822/1‑100 (MQ=255)
                                                                                        cccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCt           >  2:172/1‑100 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCta          <  2:1603504/100‑1 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCta          >  1:445125/1‑100 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCta          >  2:793457/1‑100 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCta          <  1:2414238/100‑1 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAAACCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             <  1:1993452/97‑1 (MQ=255)
                                                                                            aaGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCtatat       <  2:1724808/100‑1 (MQ=255)
                                                                                               ccTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGcagatcgga    >  1:1069410/1‑92 (MQ=255)
                                                                                                cTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtg   <  1:533972/100‑1 (MQ=255)
                                                                                                cTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtg   >  2:1987459/1‑100 (MQ=255)
                                                                                                cTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTCGCTatatat     >  1:1719768/1‑98 (MQ=255)
                                                                                                 tGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtgt  >  2:2268499/1‑100 (MQ=255)
                                                                                                   |                                                                                                 
CAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATTGT  >  NC_000913/2800420‑2800616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: