| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,121,887 | (GC)5→4 | coding (400‑401/531 nt) | hslV ← | peptidase component of the HslUV protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,121,879 | 0 | G | . | 96.9% | 426.7 / 6.4 | 98 | coding (409/531 nt) | hslV | peptidase component of the HslUV protease |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base . (44/51); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
| * | NC_000913 | 4,121,880 | 0 | C | . | 99.0% | 431.3 / ‑1.7 | 98 | coding (408/531 nt) | hslV | peptidase component of the HslUV protease |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base . (45/51); minor base G (1/0); total (46/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
CGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGAT > NC_000913/4121780‑4121972 || cGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAg > 2:2652654/1‑100 (MQ=255) gATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgc > 2:1799820/1‑100 (MQ=255) aTGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcg < 2:2387421/100‑1 (MQ=255) gtgtGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgc > 1:3250540/1‑100 (MQ=255) tgtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcg > 1:2430731/1‑100 (MQ=255) tgtgGAAATGGTTGGTATAGATGCAAATGTCGACTGCAATATAAAACGCCTTTTCAGAAATTTTACGCGCGCTAAGTTCAGTGTTTGCTAACAg > 2:2936602/1‑94 (MQ=255) gtgGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc > 2:3266513/1‑100 (MQ=255) ggAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccg > 1:2211931/1‑98 (MQ=255) ggAAATGGTTGGTATAGATGCAAATGACGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccg > 1:1988218/1‑98 (MQ=255) gAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgc > 2:1261975/1‑97 (MQ=255) gAAATGGTTGGTATAGATGCAAATGTCGCCCGCGATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgc > 2:2143888/1‑97 (MQ=255) aaTGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcag < 1:1860299/100‑6 (MQ=255) aTGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcagc > 2:1697986/1‑94 (MQ=255) tggttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgccgcagcc > 1:535774/1‑93 (MQ=255) ggttggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCt > 1:1359351/1‑100 (MQ=255) tggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTggg > 1:1289266/1‑100 (MQ=255) ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGc < 1:693946/100‑1 (MQ=255) ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGc > 1:2034411/1‑100 (MQ=255) ggtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGc > 1:1755085/1‑100 (MQ=255) gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCg < 2:3157001/100‑1 (MQ=255) gtATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCg < 2:84304/100‑1 (MQ=255) tataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGt > 1:1424169/1‑100 (MQ=255) ataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTa < 1:74235/100‑1 (MQ=255) ataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTa < 1:74253/100‑1 (MQ=255) ataGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTa < 2:2069965/100‑1 (MQ=255) taGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTaa > 2:531985/1‑100 (MQ=255) aGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAg < 1:2896110/100‑1 (MQ=255) aGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAg < 1:2983718/100‑1 (MQ=255) aTGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAggg > 2:2799271/1‑100 (MQ=255) aTGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAggg < 1:1099915/100‑1 (MQ=255) aTGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAggg < 2:2029852/100‑1 (MQ=255) tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgc < 2:2993946/100‑1 (MQ=255) tGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgc < 1:200688/100‑1 (MQ=255) aaaTGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGgccgc < 1:1256643/100‑1 (MQ=255) gTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGa > 2:1481579/1‑100 (MQ=255) tCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAg > 2:1587357/1‑100 (MQ=255) cGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc > 2:683801/1‑100 (MQ=255) cGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc > 2:185308/1‑100 (MQ=255) gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc < 1:3005988/100‑1 (MQ=255) gCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCGGGGCGTAAGGGCCGCCGGAGcc > 1:1110405/1‑100 (MQ=255) gCCCGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGcc > 2:1146769/1‑100 (MQ=255) tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt > 2:2884874/1‑100 (MQ=255) tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt < 1:608742/100‑1 (MQ=255) tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt > 1:2725776/1‑100 (MQ=255) tGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGAt > 2:3192289/1‑100 (MQ=255) gCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATa > 1:1544264/1‑100 (MQ=255) cAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAg < 2:3244260/100‑1 (MQ=255) atatCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCa < 2:389073/100‑1 (MQ=255) atatCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑ACGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCa > 2:1844653/1‑100 (MQ=255) tatCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCaa < 2:2211905/100‑1 (MQ=255) tatCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCaa > 2:2485092/1‑100 (MQ=255) tCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa < 2:2396728/100‑1 (MQ=255) tCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa < 2:347125/100‑1 (MQ=255) cAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAG‑G‑GCGCGCCGCCGCCTGGGCGTAAGGGCCGCCGGACCCGATGGCAATAAg > 2:1384381/1‑100 (MQ=255) aCGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGAt > 1:1871785/1‑100 (MQ=255) cGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATc > 2:580116/1‑100 (MQ=255) gCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTCACA‑‑GCGCGCGCCGCAGCCTGGGCGTCAGGGCCGCCGGAGCCGATAGCAATAAGATCg > 2:1225985/1‑100 (MQ=255) ccTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt > 2:3204302/1‑100 (MQ=255) ccTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt > 2:1311185/1‑100 (MQ=255) ccTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt > 1:2384612/1‑100 (MQ=255) cTTTTCAGCAATTTCACGTGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGACGCCGGAGACGATAGCAATAAGATCGtt > 2:1619316/1‑100 (MQ=255) cTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTCTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtt < 1:2292487/100‑1 (MQ=255) ttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGGGCGCG‑GCC‑CAGCCTGGGCGTAAGGGCCGCCGGAGCCGATCGCAATAAGATCGTTTTc > 2:1155456/1‑100 (MQ=255) ttCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTc < 1:1280438/100‑1 (MQ=255) tCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCt < 2:1233521/100‑1 (MQ=255) cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 2:163745/1‑100 (MQ=255) cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg < 2:535766/100‑1 (MQ=255) cAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg > 2:1436567/1‑100 (MQ=255) aGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTgg < 2:3228816/100‑1 (MQ=255) gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc > 2:2604976/1‑100 (MQ=255) gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc < 1:2150855/100‑1 (MQ=255) gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc < 2:2065665/100‑1 (MQ=255) gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc < 1:124577/100‑1 (MQ=255) gCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc > 1:605346/1‑100 (MQ=255) aTTTCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGc < 2:603267/100‑1 (MQ=255) tttCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGca < 1:2652687/100‑1 (MQ=255) tttCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGca < 1:560186/100‑1 (MQ=255) ttCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcac < 1:2434021/100‑1 (MQ=255) tCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacc < 2:3152952/100‑1 (MQ=255) tCACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacc < 2:284457/100‑1 (MQ=255) cACGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacca > 1:3123874/1‑100 (MQ=255) cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg < 1:1704809/100‑1 (MQ=255) cGGGCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACg < 2:2349798/100‑1 (MQ=255) gggCGCTAAGTTCAGTGTTTTCTAGCA‑‑GCTCGCGCCTCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcacca < 2:1254265/97‑1 (MQ=255) gggCGCTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGt < 2:1524492/100‑1 (MQ=255) cgcTAAGTTCAGTATTTTCTAACA‑‑GCGCGCGCCGCAGCTTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAc > 2:2017675/1‑100 (MQ=255) cTAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCg > 2:217900/1‑100 (MQ=255) tAAGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGt > 2:2733990/1‑100 (MQ=255) aaGTTCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGtt > 2:1500451/1‑100 (MQ=255) ttCAGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAcc < 1:217905/100‑1 (MQ=255) aGTGTTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGt < 1:2979877/100‑1 (MQ=255) tgtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtga < 2:1424155/100‑1 (MQ=255) gtTTTCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgat < 1:1227244/100‑1 (MQ=255) ttttCTAACAGCGCG‑G‑GCCGCAGCCTGGGCGTAAGGTTCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgan < 2:726755/99‑2 (MQ=255) ttttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatg < 2:2430703/100‑1 (MQ=255) tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAATGGCCGCCGGAGCCGATAGCAATACGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga > 2:2286056/1‑100 (MQ=255) tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCGCCACGTCACCGGTAACGGtgacgt < 1:2155230/100‑4 (MQ=255) tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgatga < 1:59006/100‑1 (MQ=255) tttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGGTAACGGtgacgt < 2:2681953/100‑4 (MQ=255) ttCTAACA‑‑GCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGGTAACGGtgacgtg < 1:3192326/100‑5 (MQ=255) || CGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGAT > NC_000913/4121780‑4121972 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |