| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,765,794 | (C)7→8 | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 93.3% | 393.4 / 21.2 | 121 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (7/1); new base C (53/59); total (61/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765691‑2765881 | tCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc < 2:364768/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c > 1:289461/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c > 2:679101/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c > 1:2738516/1‑100 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c < 2:3115886/100‑1 (MQ=255) gctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c‑cc > 1:1040499/1‑100 (MQ=255) ctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGCACT‑G‑c‑cc‑c‑cc‑‑c > 2:2714142/1‑100 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c‑cc‑‑cc > 2:195165/1‑99 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c‑cc‑‑cc < 2:2048598/100‑2 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c‑cc‑‑cc < 2:2888139/100‑2 (MQ=255) ataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGa < 1:1578202/100‑1 (MQ=255) ataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑c‑cc‑c‑cc‑‑ccggta > 2:143708/1‑93 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGAc < 1:1057658/100‑1 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGAc < 1:2604109/100‑1 (MQ=255) aatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACg > 2:1665525/1‑100 (MQ=255) aatTACTAAGTATCGAGTTGCGGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCACCATTATGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGAc > 1:935453/1‑99 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑C‑CC‑‑CAGGTAGACg > 2:1381663/1‑99 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGAt < 1:2393546/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATcc < 1:2431991/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATcc < 2:2956190/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GAC‑CC‑C‑CC‑‑C‑GGTACACGAtgc > 1:312334/1‑98 (MQ=255) aGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGcc < 1:2322338/100‑1 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCta > 1:1599699/1‑100 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGAAGACGATCCTGCCCta > 2:1940348/1‑100 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCtat > 2:229012/1‑100 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGAGGGACATCAGCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGccc < 1:30773/97‑1 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTGACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCtat < 2:252614/100‑1 (MQ=255) cGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCtata > 2:536079/1‑100 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAg > 2:2618749/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTgg > 1:596627/1‑100 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTgg < 1:941663/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTgg < 1:695684/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTgg < 2:2314624/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTg < 2:467486/99‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑CACC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGa > 1:117438/1‑100 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACA‑GCC‑CC‑C‑CC‑‑C‑GGTAGCCGCTCCTGCCCTATAggcgcagtg > 1:2050185/1‑92 (MQ=255) ctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGc < 2:1171163/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCTAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGccc < 1:1616279/100‑1 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGcccc > 1:2823949/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATGGTTGGAGTGcccc > 1:3002484/1‑100 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGcccc < 2:2343178/100‑1 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTCGAGTGcccc > 2:1676139/1‑100 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:1265657/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:3172909/100‑1 (MQ=255) gTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 2:1040487/100‑1 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAt < 2:3051235/99‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGGTGTACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 1:894591/100‑1 (MQ=255) tCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCa < 2:2648714/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAg > 1:1226643/1‑100 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg > 1:2191268/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 1:3023279/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt < 1:819635/100‑1 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt > 1:359627/1‑100 (MQ=255) ggAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt < 2:2265591/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:1248332/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTg < 1:3132683/100‑1 (MQ=255) gAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATACTGCCCTATAGTTGGAGTGCCCCCTATTAAgggg > 1:1458600/1‑98 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 1:2336559/100‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTgg < 1:762117/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:256897/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 1:2591007/100‑1 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAttt < 2:235500/100‑1 (MQ=255) aCCGAAACGATGGAAATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTAAAGATGGAGTGCCACCTATTCAGGTGGCTAACtta > 1:3113517/1‑99 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:914948/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa > 1:1475292/1‑100 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc > 2:1667190/1‑100 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑CACT‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGCGTGCCCACTATTCAGTCGGCAAAACTTAg > 2:2591662/1‑99 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑C‑CCCAC‑GGTAGACGATCCTGCCCTATAGTTGGCGTGCCCCCTACTCAGGTGGCTAAATTTAg > 1:440765/1‑100 (MQ=255) aaaCGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCa < 1:1384207/100‑1 (MQ=255) aaCGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCaa > 1:538702/1‑100 (MQ=255) aaCGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCaa < 1:52538/100‑1 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCaaa > 1:108081/1‑100 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc < 1:1665545/100‑1 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CCGC‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGGGTGCCCCCTATTCAGGTGGCTAAGCTTAGCAAAt > 2:2145883/1‑99 (MQ=255) tGGACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa < 1:2312527/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:2278928/100‑1 (MQ=255) aCATCATCCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATac < 2:2478757/100‑1 (MQ=255) tcatcCCCCATTTTGTGGACTGG‑C‑CC‑C‑CC‑‑C‑GCTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt < 2:2194821/100‑1 (MQ=255) tcatcCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt > 2:1403585/1‑100 (MQ=255) tcatcCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt < 1:797178/100‑1 (MQ=255) tcatcCCCCATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt < 1:2739431/100‑1 (MQ=255) cccccATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 1:1711168/1‑100 (MQ=255) cccATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 2:3006400/1‑100 (MQ=255) cccATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:1518579/1‑100 (MQ=255) cccATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:2936124/1‑100 (MQ=255) cATTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggggg > 1:3043548/1‑100 (MQ=255) aTTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:2738482/100‑1 (MQ=255) aTTTTGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:3263704/100‑1 (MQ=255) ttttGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGt > 1:1826822/1‑100 (MQ=255) gtttGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:384354/98‑1 (MQ=255) tttGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 1:733773/1‑100 (MQ=255) ttGTGGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCCATAGTTGGAGTGCCCCCTAATCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta > 1:2746139/1‑99 (MQ=255) gtgGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatta > 1:3026426/1‑100 (MQ=255) tgGACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTACATTTAGCAAATCACTACCCCTCAGGGGGGtattgt > 1:90082/1‑98 (MQ=255) ggACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:2542039/1‑100 (MQ=255) gACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 2:2570776/100‑1 (MQ=255) gACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 2:2171067/1‑100 (MQ=255) gACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 1:195170/100‑1 (MQ=255) gACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg > 1:232376/1‑100 (MQ=255) gACT‑GCC‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 2:919869/100‑1 (MQ=255) | TCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACT‑G‑C‑CC‑C‑CC‑‑C‑GGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTG > NC_000913/2765691‑2765881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |