| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,866,592 | +C | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 98.3% | 423.0 / ‑0.0 | 118 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (57/59); total (59/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
CGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866492‑2866682 | cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cc < 2:1372248/100‑1 (MQ=255) cTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATCTTCAG‑c‑cccctgc > 1:1345169/1‑96 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgcg > 1:2665850/1‑95 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgcg < 2:2946862/100‑6 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑c‑cccctgcg > 2:824719/1‑95 (MQ=255) tttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGt < 1:2464619/100‑1 (MQ=255) ttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGtt < 2:924622/100‑1 (MQ=255) tATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGttt > 2:2341848/1‑100 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCa < 2:508110/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGctg < 1:2199475/100‑3 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAgg > 2:1547745/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGAAAAATAAATAAATAATAGAGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAgg < 2:3147530/100‑1 (MQ=255) gCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGa > 2:527630/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 2:1804511/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 2:2739750/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt > 1:383907/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGAttt < 2:2385408/100‑1 (MQ=255) cagaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTc > 1:407310/4‑100 (MQ=255) gcaaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAAGAGCGCTTCGATATTCCGCC‑CCCTGCGTTTGCAGGATCTcg > 2:2643697/3‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcg > 2:1261754/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcg < 1:1109536/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGCTTGCAGGATTTcg > 2:2765136/1‑100 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTcgcg > 1:2947488/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGCTTTCGCGCaa > 2:1134740/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCaa > 1:393793/1‑100 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCaa > 1:757240/1‑100 (MQ=255) cAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACg > 1:208557/1‑100 (MQ=255) ccTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcg > 2:177010/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc > 2:940867/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc > 1:291252/1‑100 (MQ=255) cTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGgcgc < 2:2445032/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATTCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCTCAAACGGCGCAgg < 2:2021269/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg < 2:407303/100‑1 (MQ=255) gCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAgg > 1:621147/1‑100 (MQ=255) cTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCAGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGc < 1:188210/100‑1 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc > 1:1094985/1‑100 (MQ=255) ttGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 1:449486/100‑1 (MQ=255) tGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCt < 1:2702397/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:3078269/100‑1 (MQ=255) gagaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:1139375/100‑1 (MQ=255) agaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:69807/1‑100 (MQ=255) gaCTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa < 2:2302053/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 1:2755551/100‑1 (MQ=255) cTGGCCTTTCTGACAGATGCGTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑CACCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 1:1606084/1‑100 (MQ=255) tGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAcc < 1:2680511/100‑1 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:2852072/1‑100 (MQ=255) ggCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:3081735/1‑100 (MQ=255) gCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg > 2:736903/1‑100 (MQ=255) ccTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGa > 2:2885140/1‑100 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGCACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCCAACGGCGCAGGCCTTCAACCTGaa < 2:641461/99‑1 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt < 1:1261768/100‑1 (MQ=255) tttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAAt > 1:2630292/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg > 2:2612515/1‑100 (MQ=255) tGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCACCCTGAATCTgg < 2:3174591/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc > 2:840568/1‑100 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 2:289064/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:2249455/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 2:2064600/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg < 2:2707873/100‑1 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa < 2:69805/100‑1 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaa < 1:4829/100‑1 (MQ=255) aGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGaa < 2:535964/100‑1 (MQ=255) tGCTTACTTACTCGCGGAACAGCGCTTCGATATACAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCACAGGCCTTCAACCTGAATCTGGCGAacac > 2:1959983/1‑100 (MQ=255) gCTTACTTACTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACg < 1:53573/100‑1 (MQ=255) cttacttaCTCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGt < 1:2629143/100‑1 (MQ=255) tacttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGCTTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTc > 2:1080746/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg > 1:911676/1‑100 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:840578/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:2254999/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCGGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:840250/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:1431405/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 1:2978987/1‑100 (MQ=255) tCGCGGAACAGCGCTTCGATATTCAGCC‑CCCTGCCTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACATGTTCACGGGTg < 2:1720442/100‑1 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 1:3257517/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa < 1:1859399/100‑1 (MQ=255) gcgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg < 2:2914354/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:764044/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 2:125498/100‑1 (MQ=255) cgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg > 2:2205100/1‑99 (MQ=255) cgGAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAg < 2:1108876/99‑1 (MQ=255) ggAACAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGc < 1:2321169/100‑1 (MQ=255) aCAGCGCTTCGATATTTAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa > 2:1862109/1‑100 (MQ=255) aCAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCaa > 2:3075117/1‑100 (MQ=255) cAGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt < 1:1207263/100‑1 (MQ=255) aGCGCTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 2:706183/1‑100 (MQ=255) gcTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 2:1317373/1‑100 (MQ=255) gcTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:824728/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:2947453/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1960693/100‑1 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 2:1361244/1‑100 (MQ=255) cTTCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc > 1:1460563/1‑100 (MQ=255) ttCGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACg > 2:3024651/1‑100 (MQ=255) cGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:1015322/100‑1 (MQ=255) cGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 2:46338/100‑1 (MQ=255) cGATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:527638/100‑1 (MQ=255) gATATTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 2:208552/100‑1 (MQ=255) tatTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 2:2103155/100‑1 (MQ=255) atTCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTAc < 2:3029172/100‑1 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 2:393786/100‑1 (MQ=255) ttCAGCC‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa < 1:238290/100‑1 (MQ=255) | CGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCCTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCAG‑C‑CCCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866492‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |