| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,459,293 | (G)5→6 | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 97.8% | 314.6 / 0.3 | 89 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base G (41/46); total (43/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGC > NC_000913/3459189‑3459381 | tGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtgg‑t < 1:2679346/100‑1 (MQ=255) ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtgg‑t‑g > 1:738515/1‑100 (MQ=255) ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtgg‑t‑g > 1:628344/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑ggg > 2:2764590/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑ggg > 2:145761/1‑100 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCTTCATGG‑T‑ggg > 2:891189/1‑99 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gggg < 1:1296527/100‑1 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGACCTTCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gggg < 1:995373/100‑1 (MQ=255) gCATTGGGCAACCGCAGGTGAATACCCGTGTGGATATGTCTTTCTCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑ggggg < 2:1479473/99‑1 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gggggg < 2:898504/100‑2 (MQ=255) gggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGCG‑GGGGGAAAtt > 2:288854/1‑100 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTc > 2:698954/1‑100 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTc > 2:706698/1‑100 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTc > 2:708835/1‑100 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑ggggggcaattc > 2:349187/1‑93 (MQ=255) gCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCg > 2:1361219/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGt < 1:1753609/100‑1 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGt < 2:151383/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTg < 1:386316/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTg < 2:163309/99‑1 (MQ=255) aGGTGAATCCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAg < 1:1029628/100‑1 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGaa < 1:2040030/100‑1 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAAc < 1:2219556/100‑1 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAAc < 1:1991364/100‑1 (MQ=255) gAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAAc > 2:1816018/1‑100 (MQ=255) tACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACcgc > 1:3154697/1‑100 (MQ=255) aCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACcgcg < 1:2451884/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCgcgc > 2:2051925/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCgcgc > 1:426002/1‑100 (MQ=255) cccGTGTGGATATGGCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCgcgc < 2:2585197/100‑1 (MQ=255) cccGTGTGGATATATCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCgcgc < 2:2594122/100‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAg < 1:997260/100‑1 (MQ=255) gtgtGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGa < 1:821271/100‑1 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGAt > 1:2653666/1‑100 (MQ=255) tgtgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGAt > 1:625175/1‑100 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTg > 2:205051/1‑100 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGGAATTCGTGATACAGAAACCGCGCAGAt > 2:81740/1‑97 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGc > 2:1364589/1‑100 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGc < 1:2275076/100‑1 (MQ=255) gATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCg < 1:1152490/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg > 2:2219328/1‑100 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 1:1418340/100‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 1:1125933/100‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt > 1:2956264/1‑100 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCa > 2:2538290/1‑100 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCa > 1:1241492/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:2438152/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 2:2567039/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:2577833/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTGCGCCAGGACCTGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgn < 2:506586/100‑2 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 1:2764625/100‑1 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc > 1:928561/1‑100 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc < 2:1598533/100‑1 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc > 1:2529648/1‑100 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc > 1:2966999/1‑100 (MQ=255) gctcgcGGCCTGCGCGCCATACATCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCGGATTGCGGTTCAGGCCTCg > 2:1898220/1‑100 (MQ=255) cgcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTc < 1:1476678/100‑1 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAcc < 2:380005/100‑1 (MQ=255) gCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCg > 1:2988056/1‑100 (MQ=255) gCCTGCGCGCCATACTACGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCg < 2:1912763/100‑1 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg < 2:2172187/99‑1 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc < 1:753545/100‑1 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc > 1:2999539/1‑100 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc > 2:1181270/1‑100 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc > 2:1181077/1‑100 (MQ=255) gcgcgcCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCa < 1:1361233/100‑1 (MQ=255) gcgcgcCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCa > 1:1501376/1‑100 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCt < 1:2684111/100‑1 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTgg < 1:144749/99‑1 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt > 2:570279/1‑100 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 2:3127667/99‑1 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa < 2:2248217/100‑1 (MQ=255) aCTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAct > 2:1528063/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:48951/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:358883/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGACTGCGGCTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:2200484/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa > 1:85442/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:921940/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:114537/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:737569/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:75505/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa > 1:2806262/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:2786850/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:347576/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac > 1:1411008/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑T‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAaca > 1:3167098/1‑100 (MQ=255) cAGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:2786760/99‑1 (MQ=255) aGGACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:161029/98‑1 (MQ=255) ggACCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACt > 1:1775483/1‑100 (MQ=255) aCCCGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 2:2778572/100‑1 (MQ=255) cccGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 1:1348098/1‑100 (MQ=255) ccGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 2:628335/100‑1 (MQ=255) ccGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 2:2313180/100‑1 (MQ=255) cGGATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcaca < 1:2882212/100‑1 (MQ=255) gATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac > 1:2454446/1‑99 (MQ=255) gATGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACt < 1:2967505/100‑1 (MQ=255) tGTCGTCATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTaa < 2:1241478/100‑1 (MQ=255) gtcATGG‑TGGGGGGAAATTCGTGATACAGCAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg < 2:738507/99‑1 (MQ=255) cATGG‑TGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 1:2538321/100‑1 (MQ=255) cATGG‑TGGGGGGAAAGTCGTGATACAGAAACCGCGCAGAGTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc > 2:3102816/1‑100 (MQ=255) | TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGC > NC_000913/3459189‑3459381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |