Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,644,2890AC33.0% 225.8 / 186.0 180intergenic (‑6/+144)rlmN/ndkdual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent/multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'‑phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base A (63/57);  new base C (0/59);  total (63/117)
Fisher's exact test for biased strand distribution p-value = 5.94e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 181 total aligned reads displayed.

CTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATT  >  NC_000913/2644194‑2644388
                                                                                               |                                                                                                   
cTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTcc                                                                                                 >  1:2467391/1‑100 (MQ=255)
 tCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCg                                                                                                <  2:2858867/100‑1 (MQ=255)
  cccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCgg                                                                                               <  1:2243607/100‑1 (MQ=255)
  cccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCgg                                                                                               >  1:93906/1‑100 (MQ=255)
  cccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCgg                                                                                               >  1:117112/1‑100 (MQ=255)
   ccGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGAAATATGCTATTCCgg                                                                                               >  1:3110338/1‑99 (MQ=255)
    cGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGcc                                                                                             >  2:863750/1‑100 (MQ=255)
             tgACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGttatta                                                                                    <  1:2063608/100‑1 (MQ=255)
              gACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTac                                                                                   >  2:2310254/1‑100 (MQ=255)
              gACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTac                                                                                   <  1:2592329/100‑1 (MQ=255)
                cGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTacac                                                                                 >  2:126560/1‑100 (MQ=255)
                cGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTacac                                                                                 >  1:684945/1‑100 (MQ=255)
                 ggTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCAGGCCTCGTTATTACACg                                                                                >  2:2529113/1‑100 (MQ=255)
                   ttGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGtt                                                                              >  2:3031732/1‑100 (MQ=255)
                    tGAGATCCAGCAGGTTGA‑TTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTAt                                                                            <  1:2380055/100‑1 (MQ=255)
                     gagaTCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTAt                                                                            <  2:295518/100‑1 (MQ=255)
                         tCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcc                                                                        >  1:654769/1‑100 (MQ=255)
                          ccAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGccc                                                                       >  1:336057/1‑100 (MQ=255)
                           tagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                      <  2:10233/99‑1 (MQ=255)
                           cagcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccc                                                                      <  1:770422/100‑1 (MQ=255)
                            agcagGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGcccca                                                                     >  1:10233/1‑99 (MQ=255)
                                   tGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGt                                                              <  1:1008556/100‑1 (MQ=255)
                                    gATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGtt                                                             >  1:3025119/1‑100 (MQ=255)
                                     aTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTg                                                            <  1:813618/100‑1 (MQ=255)
                                     aTTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTg                                                            <  2:606574/100‑1 (MQ=255)
                                      tttttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGa                                                           <  1:2727404/100‑1 (MQ=255)
                                      tttttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGa                                                           <  1:2521111/100‑1 (MQ=255)
                                       ttttCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaa                                                          <  2:3067625/100‑1 (MQ=255)
                                           ccATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGaaaaaa                                                      <  2:2835268/100‑1 (MQ=255)
                                            cATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAg                                                     <  1:638320/100‑1 (MQ=255)
                                             aTCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGa                                                    <  2:10516/100‑1 (MQ=255)
                                               cTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGaaa                                                  >  1:2361120/1‑100 (MQ=255)
                                                tttCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAAc                                                 >  2:1841291/1‑100 (MQ=255)
                                                     tggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccc                                            >  1:467466/1‑100 (MQ=255)
                                                     tggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGcccc                                            >  2:3116735/1‑100 (MQ=255)
                                                     tggtgACGTTTTCAGGTGTGACTAATTGTTAAGACATATGCTATTCCGGCCTCGTTATTACACGATATGGCACCTGGAGGGTTGAAGAAAAAAAGGc                                               >  1:2719786/1‑97 (MQ=255)
                                                      ggtgACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCg                                           >  2:1733571/1‑100 (MQ=255)
                                                         gACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTg                                        >  1:1070527/1‑100 (MQ=255)
                                                            gTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGc                                     >  1:779184/1‑100 (MQ=255)
                                                            gTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGc                                     >  2:2392440/1‑100 (MQ=255)
                                                                tCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgct                                 >  2:1642492/1‑100 (MQ=255)
                                                                 cAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCggacgagcagcc                                <  2:1256274/100‑11 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                              <  2:2058782/100‑1 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                              >  1:2754925/1‑100 (MQ=255)
                                                                   ggTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGgctgct                              <  2:477401/100‑1 (MQ=255)
                                                                    gtgtGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTc                             <  1:2895856/100‑1 (MQ=255)
                                                                       tgACTCATTGTACAGACATCTGCTAGTCCGGCCTCGTTATTAGACGGTATTGCCCCGTGAGGGTTGGAAGAAGAAACTCCCCGGCGAGCGGCTGCTCGt                           >  2:2719997/1‑99 (MQ=255)
                                                                       tgACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTc                          >  2:2159974/1‑100 (MQ=255)
                                                                        tgactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                         <  1:1890826/92‑1 (MQ=255)
                                                                        gccTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                         >  1:2207776/3‑100 (MQ=255)
                                                                        gACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                         >  2:2900490/1‑100 (MQ=255)
                                                                        gACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTcc                         >  2:2382318/1‑100 (MQ=255)
                                                                         gactggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCg                        <  1:523193/93‑1 (MQ=255)
                                                                          cTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgg                       >  1:307601/1‑100 (MQ=255)
                                                                           ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                      <  1:1943840/95‑1 (MQ=255)
                                                                           ctggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCggg                      <  1:1854187/95‑1 (MQ=255)
                                                                            tggagTTCAGTCGTGTGCTCTTCCGGTGTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGATTCGCCCCGGTGAGCGGCTGCTCGTCCgggg                     <  1:1292771/96‑1 (MQ=255)
                                                                            tggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                     <  1:675103/96‑1 (MQ=255)
                                                                            tggagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                     <  1:295182/96‑1 (MQ=255)
                                                                            naTTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                     >  2:2692644/2‑100 (MQ=255)
                                                                            aaTTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCgggg                     >  1:1836914/1‑100 (MQ=255)
                                                                              ttGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                   >  2:1343957/1‑100 (MQ=255)
                                                                              gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                   <  1:2776936/98‑1 (MQ=255)
                                                                              gagTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgc                   <  1:3069322/98‑1 (MQ=255)
                                                                               tGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcg                  <  1:2309482/100‑1 (MQ=255)
                                                                                gTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                 <  1:1940676/100‑1 (MQ=255)
                                                                                gTTCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                 <  1:2407811/100‑1 (MQ=255)
                                                                                gTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                 >  1:2023783/1‑100 (MQ=255)
                                                                                gTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                 >  1:3200599/1‑100 (MQ=255)
                                                                                gTTCAGACATATGCTATTCCAGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGgcgc                 >  2:1988709/1‑100 (MQ=255)
                                                                                 ttCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCt                <  1:145929/100‑1 (MQ=255)
                                                                                 ttCAGACGTGTGCT‑TTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTg               <  1:217767/100‑1 (MQ=255)
                                                                                  tCAGACGTGTGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTg               <  1:25346/100‑1 (MQ=255)
                                                                                  tCAGACGTGTGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTg               <  1:1602342/100‑1 (MQ=255)
                                                                                   cagacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGc              <  1:1405327/92‑1 (MQ=255)
                                                                                    agacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCa             <  1:1078812/93‑1 (MQ=255)
                                                                                     gacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt            <  1:1349702/94‑1 (MQ=255)
                                                                                     gacgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt            <  1:2665595/94‑1 (MQ=255)
                                                                                     gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt            >  2:1093563/1‑100 (MQ=255)
                                                                                     gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt            <  1:2043789/100‑1 (MQ=255)
                                                                                     gACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAt            <  1:1090286/100‑1 (MQ=255)
                                                                                      acgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAtt           <  1:1772665/95‑1 (MQ=255)
                                                                                      acgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCAtt           <  1:907700/95‑1 (MQ=255)
                                                                                       cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:1160167/96‑1 (MQ=255)
                                                                                       cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:611017/96‑1 (MQ=255)
                                                                                       cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:2835181/96‑1 (MQ=255)
                                                                                       cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:2457798/96‑1 (MQ=255)
                                                                                       cgtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:1383777/96‑1 (MQ=255)
                                                                                       cATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTg          <  1:843554/100‑1 (MQ=255)
                                                                                        gtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt         <  1:1688795/97‑1 (MQ=255)
                                                                                        gtgtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt         <  1:2102079/97‑1 (MQ=255)
                                                                                        atatGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGt         <  2:117109/100‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc       <  1:745870/99‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc       <  1:1060254/99‑1 (MQ=255)
                                                                                          gtGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc       <  1:1713463/99‑1 (MQ=255)
                                                                                          atGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAc       >  2:583794/1‑100 (MQ=255)
                                                                                           tGCTCTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGCGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTAct      <  1:323202/100‑2 (MQ=255)
                                                                                           tGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACa      >  2:2283942/1‑100 (MQ=255)
                                                                                             cTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACaaa    <  1:1195624/100‑1 (MQ=255)
                                                                                               aTTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAAtt  <  1:1919376/100‑1 (MQ=255)
                                                                                               |                                                                                                   
CTCCCGCATCTGCTGACGGTTGAGATCCAGCAGGTTGATTTTTCCATCTTTCGTGGTGACGTTTTCAGGTGTGACTAATTGTTCAGACATATGCTATTCCGGCCTCGTTATTACACGTTATGGCCCCTGGAGGGTTGAAAAAAGAAACGCCCCGGTGAGCGGCTGCTCGTCCGGGGGCGCTGCATTGTACAAATT  >  NC_000913/2644194‑2644388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑