| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,028 | 0 | T | C | 23.7% | 512.0 / 167.5 | 280 | intergenic (‑238/+70) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (128/78); new base C (64/0); total (202/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.86e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAT > NC_000913/3705931‑3706126 | aCAGATTGTTGACAAAGTTCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTc > 2:369323/1‑100 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTc < 2:2928411/100‑1 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTc < 2:1349152/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑g > 2:1735310/1‑100 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑Gt > 1:879260/1‑100 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑Gt > 2:3192613/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTa > 2:30064/1‑100 (MQ=255) aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCATGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAg < 1:3094939/100‑1 (MQ=255) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGc > 1:2091747/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGcc < 2:2243448/100‑1 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTg > 2:2186363/1‑100 (MQ=255) aaaGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATaa < 2:1583110/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGc < 2:3245923/100‑1 (MQ=255) aGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGc > 2:1105529/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCg > 1:589677/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCg < 1:1566178/100‑1 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGa < 1:1467443/100‑1 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGa > 1:2766322/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGa > 2:1012508/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:703611/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:2996701/100‑1 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAgcgc < 1:2920300/100‑1 (MQ=255) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTC‑‑GTAGGCCTGATAAGCGTAGCGCAt > 2:510925/8‑100 (MQ=18) tgtgTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCAt > 1:2206763/1‑100 (MQ=18) tGTTTATGCCGGATGGGGCGTTAGCGCCTTATCCGGTCTAC‑AAGATCGTGCAAATTCGATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:254476/99‑1 (MQ=18) ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGC‑‑A‑GAGATTAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATc > 2:2345972/7‑100 (MQ=17) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa > 2:1826380/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 1:1509871/100‑1 (MQ=255) cgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGT‑‑G‑GG‑CTCCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:2512424/6‑100 (MQ=18) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg > 1:37113/1‑100 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:786826/5‑100 (MQ=18) taggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGC‑‑A‑GA‑AATCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:2269847/4‑100 (MQ=18) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑A‑AT‑TCTCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:1472395/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACTCCGCATCCGGCCTAC‑AAAAGCACGCAAATTCAATATATTGC‑‑A‑GA‑GATTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:409248/4‑100 (MQ=11) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGC‑‑A‑GG‑AGCTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:1747510/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑‑AAACCGCGCAAATTCAATATATTGCGGA‑GA‑AAAT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:200442/4‑100 (MQ=18) taggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg > 2:2439937/4‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:1550083/3‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1225830/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGC‑‑A‑GG‑AGCTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1668977/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAGTTCGTGCAAATTCAATAAATTGC‑‑A‑‑A‑TATGAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGcg > 2:2281968/3‑99 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑‑AAACCGCGCAAATTCAATATATTGCGGA‑GA‑AAAT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGct > 2:1160865/3‑99 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGC‑‑ATGG‑GCCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3200750/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2650298/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:3169858/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2415911/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑‑‑A‑ATCTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:625132/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑‑‑A‑ATCTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:827925/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 1:2664858/2‑100 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2120521/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGC‑‑ATGG‑GCCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:2633705/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:773671/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AGCCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2412234/1‑99 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AGCCAC‑‑GTAGGCCTGATACGCGTAGCGAATCAGGCa > 1:915406/9‑98 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAATCCTTGCGAATTCAATATATTGT‑‑ATGG‑AAATTC‑‑‑‑AGGCCTGATAAGCGTAGCGCATCAGGCtttt > 2:479706/9‑100 (MQ=25) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGC‑‑A‑GA‑GATTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAatt > 2:2807920/8‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:1488497/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AGCCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2153548/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc > 2:184925/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 1:2731792/7‑96 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 1:2827292/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCATACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:1138195/7‑100 (MQ=18) ggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 1:1326323/7‑100 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:1159230/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:4128/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 2:618983/1‑100 (MQ=255) aaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc > 2:3083165/3‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 1:53518/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 2:2120495/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc > 1:2679524/1‑100 (MQ=255) tAACGCCTTATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 1:1576267/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAG‑TGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 2:1645383/1‑100 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc > 1:2461578/1‑100 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 2:812876/1‑100 (MQ=255) ccGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:47441/100‑1 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 1:1769696/100‑1 (MQ=255) aC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 2:2721619/1‑100 (MQ=255) c‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1954730/1‑99 (MQ=255) aaaaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGTATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 1:2301231/100‑1 (MQ=255) aaaaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa > 2:738477/1‑100 (MQ=255) aaaaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTa < 2:112657/100‑1 (MQ=255) aaTCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:1824140/100‑1 (MQ=255) gTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 2:1507270/1‑100 (MQ=255) gCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg > 2:2705416/1‑100 (MQ=255) cAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 2:2881958/1‑100 (MQ=255) cAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:2022323/1‑100 (MQ=255) aaTTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 2:1202125/100‑1 (MQ=255) ttCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATaga < 2:589668/100‑1 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga > 2:893583/1‑100 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga > 1:2355553/1‑100 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGAGAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga > 2:2148239/1‑100 (MQ=255) cATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 1:1396724/1‑100 (MQ=255) tGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt < 2:1380758/97‑1 (MQ=255) tGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg < 2:3233409/100‑1 (MQ=255) c‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa < 1:3192650/100‑1 (MQ=255) gA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 1:3139454/1‑100 (MQ=255) a‑aTTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 1:30065/100‑1 (MQ=255) a‑aTTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 1:332944/100‑1 (MQ=255) aTTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa < 2:725961/100‑1 (MQ=255) ttttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt > 1:1106197/1‑100 (MQ=255) | TACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAT > NC_000913/3705931‑3706126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |