| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,519,367 | C→T | intergenic (‑303/+98) | aroK ← / ← hofQ | shikimate kinase I/DNA catabolic putative fimbrial transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,519,367 | 0 | C | T | 99.3% | 483.0 / ‑5.0 | 140 | intergenic (‑303/+98) | aroK/hofQ | shikimate kinase I/DNA catabolic putative fimbrial transporter |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (58/81); total (58/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
CTGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCACCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTACGGC > NC_000913/3519270‑3519461 | ctGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCa < 1:1959812/100‑1 (MQ=255)ctGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCa < 1:1864052/100‑1 (MQ=255)ctGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCa < 1:2808831/100‑1 (MQ=255)ctGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCa < 1:910485/100‑1 (MQ=255)ctGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCa < 1:3155237/100‑1 (MQ=255) ggCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAAc > 1:2366892/1‑100 (MQ=255) ggCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAAc < 1:1911336/100‑1 (MQ=255) ggCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAAc > 2:1849745/1‑100 (MQ=255) aTAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACtctc < 1:1724721/100‑1 (MQ=255) aaTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCaaa < 1:382934/100‑1 (MQ=255) aaTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCaaa > 2:2222418/1‑100 (MQ=255) aTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAAt > 1:3087492/1‑100 (MQ=255) aTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAAt > 2:1175056/1‑100 (MQ=255) aTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAAt > 2:2491363/1‑100 (MQ=255) aTCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAAt > 1:2644860/1‑100 (MQ=255) cACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCg > 1:1598468/1‑100 (MQ=255) aCCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCgg < 1:805794/100‑1 (MQ=255) aCCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCgg < 1:995885/100‑1 (MQ=255) ccGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGt < 2:890805/100‑1 (MQ=255) ccGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGt > 1:2542128/1‑100 (MQ=255) ccGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGt < 1:1065704/100‑1 (MQ=255) ccGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGt < 1:2019099/100‑1 (MQ=255) cGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTa < 2:258734/100‑1 (MQ=255) gggTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTAc < 1:2932752/100‑1 (MQ=255) aaGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCt < 2:140168/100‑1 (MQ=255) aGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCtt < 1:2911931/100‑1 (MQ=255) aTTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGt < 2:2846727/100‑1 (MQ=255) ttAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTa < 1:2289828/100‑1 (MQ=255) aGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATg < 2:2399327/100‑1 (MQ=255) aGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATg < 2:3045852/100‑1 (MQ=255) gCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGc > 2:2636090/1‑100 (MQ=255) gCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGc > 2:711810/1‑100 (MQ=255) gCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGc < 2:3180571/100‑1 (MQ=255) cGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCt > 1:3066646/1‑100 (MQ=255) aaaaaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTaaa > 1:76379/1‑100 (MQ=255) aaaaaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTaaa > 1:1784551/1‑100 (MQ=255) aaaaaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTaaa > 2:565299/1‑100 (MQ=255) aaaaaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTaaa > 2:2450614/1‑100 (MQ=255) aaaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATa < 2:2608961/100‑1 (MQ=255) aaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATAc < 1:2874629/100‑1 (MQ=255) aaaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATAc < 1:573780/100‑1 (MQ=255) aaGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATAcc < 2:560263/100‑1 (MQ=255) aGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCt > 2:213382/1‑100 (MQ=255) gACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGACCGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTg < 2:2053582/100‑1 (MQ=255) cAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcg < 2:1963891/100‑1 (MQ=255) cAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcg > 1:1367502/1‑100 (MQ=255) cAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcg < 2:328524/100‑1 (MQ=255) cAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcg > 2:1479999/1‑100 (MQ=255) cAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgc > 2:427062/1‑99 (MQ=255) aGCAAACTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgc < 1:142655/100‑1 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCGTCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 2:338722/1‑100 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 2:2158358/1‑100 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 2:1881590/1‑100 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg < 2:2905515/100‑1 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 1:2628340/1‑100 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 1:1524624/1‑100 (MQ=255) gCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTgcgcg > 1:2438193/1‑100 (MQ=255) aaaaTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGcgcgcg > 1:2060827/1‑100 (MQ=255) aaaaTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGcgcgcg < 2:1625357/100‑1 (MQ=255) aaaaTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGcgcgcg > 1:2814817/1‑100 (MQ=255) aaTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTc < 2:2343371/100‑1 (MQ=255) aTGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCa < 1:3139426/100‑1 (MQ=255) nccgccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCaaa > 2:3238038/2‑100 (MQ=255) gccgccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCaaa < 1:958006/100‑1 (MQ=255) gccgccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCaaa < 1:2478805/100‑1 (MQ=255) ccgccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAAGCGGGACTCCTTGTATGCTAAATACCTGCGCGCGTc < 2:46672/96‑1 (MQ=255) cgccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTACATACCTGCGCGCGTCAAATa < 2:1988190/100‑1 (MQ=255) gccTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAg < 2:71244/100‑1 (MQ=255) cTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGAt > 1:912109/1‑100 (MQ=255) tGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATg < 2:2814782/100‑1 (MQ=255) aTAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAacac < 1:426337/100‑1 (MQ=255) aTAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAacac > 2:849640/1‑100 (MQ=255) tAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACg < 2:3190023/100‑1 (MQ=255) tAAATCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACg > 1:1359851/1‑100 (MQ=255) aaaTCATCATCATGGAACGCAGGCAGCGAAGAGCATCAGCTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGt < 2:1784529/100‑1 (MQ=255) aaTCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACCCGtn < 2:812205/100‑2 (MQ=255) aaTCATCATCATGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGtt > 1:548078/1‑100 (MQ=255) catcatcatGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAg < 1:1810511/100‑1 (MQ=255) catcatcatGGAACGCAGGCAGCGAAGAGCATCAACTCGCAAAGCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAg < 1:1089220/100‑1 (MQ=255) tcattatGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAAATGAAACACGTTCAGc < 2:1344892/99‑1 (MQ=255) atcatGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTa > 1:95347/1‑100 (MQ=255) atcatGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTa > 1:1603572/1‑100 (MQ=255) atcatGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTa > 1:2458546/1‑100 (MQ=255) catGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTaaa < 1:2491392/100‑1 (MQ=255) catGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTaaa < 1:3111384/100‑1 (MQ=255) atGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTaaaa > 1:2315631/1‑100 (MQ=255) atGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTaaaa < 2:178551/100‑1 (MQ=255) atGGAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTaaaa > 1:1407477/1‑100 (MQ=255) gAACGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACa < 1:2274732/100‑1 (MQ=255) aCGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACAtt < 1:2348078/100‑1 (MQ=255) aCGCAGGCAGCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACAtt < 1:2611229/100‑1 (MQ=255) aggcagCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCg > 1:69871/1‑100 (MQ=255) gcagCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGc > 2:2276140/1‑99 (MQ=255) gcagCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCt < 1:519908/100‑1 (MQ=255) gCGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCtttt < 1:1849767/100‑1 (MQ=255) cGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCtttt < 2:3095655/99‑1 (MQ=255) cGAAGAGCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTa < 1:1141546/100‑1 (MQ=255) gAAGAGCACCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTAc < 2:4133/100‑1 (MQ=255) agagCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTACgg < 2:2542097/100‑1 (MQ=255) gagCATCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTACGGc < 1:1698656/100‑1 (MQ=255) | CTGGCGATAAATCACCGGGTAAGATTAGCGTAAAAAAGACAGCAAAATGCCGCCTGAATGATAAATCATCATCATGGAACGCAGGCAGCGAAGAGCACCAACTCTCAAATCGGTACTCCTTGTATGCTAAATACCTGCGCGCGTCAAATAGATGAAACACGTTCAGCGTAAAAACATTACCGCTTTTACGGC > NC_000913/3519270‑3519461 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |