New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3622466 =NA (NA)14 (0.150) 6/170 NT 100% coding (3275/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3622497 = 0 (0.000)coding (3306/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGggaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3622564‑3622466
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622497‑3622599
                                                                                                                                                                                                          
TCAGGCCGCACGATGCCAGTCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGG                                                                                                        <  1:1183909/100‑1
TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGG                                                                                                        >  1:2405499/1‑100
TCAGGCCGAACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCGGGAGATCACTTTCCAGCCGTTCGAGCATCTGCACCAGCAGCGGCGG                                                                                                        <  2:1662109/100‑1
 CAGGCCGTACGATGCCAGCCAGCGTCGGCTTTCCTCATTCACCCGGTCAGCCAGGATTTCACTTTCCCGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:683868/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:813796/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:800365/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:798821/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  2:1110724/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:832743/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:809720/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:2611601/100‑1
 CAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGGCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCGCCGGCGGG                                                                                                       <  2:390398/100‑1
  tGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:438511/99‑1
  aaacctCACAATGCCAGCCAGCAGCGGCTTTCCTCACTCACCCAGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:485721/93‑1
  AGGCCTCACGATGCCAGCCAGCGGTGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:931685/100‑1
  AGGCCGCACGATGCCAGCCGGCGGCGGCTTTCTTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGTGCATCTGCACCAGCACTGGCGGGA                                                                                                      <  2:1882043/100‑1
  AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  2:212065/100‑1
  AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:1404229/100‑1
  AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  2:1129309/100‑1
  AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGA                                                                                                      <  1:1000842/100‑1
  AGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:2604767/99‑1
  AGGCCGCACCATGCCAGCCAGCGGCGACTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGG                                                                                                       <  1:566901/99‑1
   GGCCGCACGCTGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGCGAA                                                                                                     >  2:107734/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  2:438507/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  2:2384146/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:1190300/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:1008529/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  2:1508617/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     <  1:2277779/100‑1
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGACGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:39379/1‑100
   GGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCAAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAA                                                                                                     >  1:2233304/1‑100
            ATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAgatcggaaga                                                                                            >  2:1881896/1‑90
                                        nACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAATGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCC                                                                >  1:781422/2‑100
                                                CAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCGTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGC                                                       >  1:712848/1‑100
                                                      GGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCGTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCAT                                                 >  1:1774019/1‑100
                                                           TCACTTTCCAGCCGGTCGAGCATCTGCACCGTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGC                                            >  2:578081/1‑100
                                                             ACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  2:2431840/1‑100
                                                             ACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGAGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  1:2195598/1‑100
                                                             ACTTTCCAGCCGGTCGAGCATCTGCACCGTGCCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  1:686770/1‑99
                                                             ACTTTCCAGCCGGTCGAGCATCTGCACCGTGCCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  1:1071624/1‑100
                                                              CTTTCCAGCCGGTCGAGCATCTGCGCCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCG                                           >  1:944120/1‑99
                                                              CTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGAGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGG                                          >  1:1478001/1‑100
                                                                 TCCAGCCGGTCGAGCATCTGCACCAGCACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCT                                       >  2:230029/1‑100
                                                                  CCAGCCGGTCGAGCATCTGCACCAGCACCGGCTGGAAAGTGAAATCCTGGCTGACAGGGTGAGTGAGGAAAGCCACCGCTGGCTGGCATCGTGCGGCC                                        >  2:1028180/1‑98
                                                                   CAGCCGGTCGAGCATCTGCACCAGCACCGGCTGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGA                                     >  1:2132985/1‑100
                                                                                            ACCGGCGGGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGAT            <  2:2016860/100‑1
                                                                                                   GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCG     <  2:670759/100‑1
                                                                                                   GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCAGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCG     >  1:209335/1‑100
                                                                                                    GAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCGGG    <  2:2030128/100‑1
                                                                                                     AAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGT   <  1:265750/100‑1
                                                                                                      AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGTCGCTGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:829336/100‑1
                                                                                                      AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:2574597/100‑1
                                                                                                      AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  2:2444331/100‑1
                                                                                                      AAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  <  1:520793/100‑1
                                                                                                                                                                                                          
TCAGGCCGCACGATGCCAGCCAGCGGCGGCTTTCCTCACTCACCCGGTCAGCCAGGATTTCACTTTCCAGCCGGTCGAGCATCTGCACCAGCACCGGCGggaa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3622564‑3622466
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAAGTGAAATCCTGGCTGACCGGGTGAGTGAGGAAAGCCGCCGCTGGCTGGCATCGTGCGGCCTGACCGTGGAGCAGATGCAAAACCAGATGGACCCGGTG  >  NC_000913/3622497‑3622599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.