| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 881947 | NA (NA) | 9 (0.110) | 6/156 | NT | NA | noncoding (8/27 nt) | REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | = 881958 | NA (NA) | noncoding (19/27 nt) | REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP81 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/881838‑881947‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaccggatgACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAAG < NC_000913/881958‑881863 TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGA > 2:209276/1‑100TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGA < 2:205101/100‑1TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGA > 1:2119985/1‑100TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGA > 1:2441149/1‑100 GGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGAT > 2:962781/1‑100 AAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAA > 2:1264606/1‑100 ATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCG < 2:2361535/100‑1 ATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCG < 2:1066596/100‑1 TGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAT < 2:1735286/100‑1 GAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGA > 2:1952462/1‑100 CTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATC < 1:1720274/100‑1 CTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATC < 1:389677/100‑1 CTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATC > 1:356122/1‑100 GTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGTT < 2:891795/100‑1 GTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGT < 1:589305/99‑1 TCGTGTGTGGTATTTCGTTATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGT < 1:2215094/98‑1 TCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGTT < 1:1952480/99‑1 TGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGTTATCAGA < 1:1553648/100‑1 ATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTA < 2:356120/100‑1 cgatctTAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCAC < 2:1686945/94‑1 gcATAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACC > 1:1794220/3‑100 nATAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATAGAATTTCATCATCACGAAATCCCACACCC > 1:924251/2‑100 TAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACAgatcg > 1:1686961/1‑95 TAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGA > 1:102148/1‑100 TAACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGA > 2:2318859/1‑100 AACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGCTTAAGAGAACCAGCTACCAAACAACTAATGGAATTTCATCATCACGAAATCCCACACCCGAC > 1:123879/1‑100 AACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGAC > 1:2006639/1‑100 AACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGAC > 1:16210/1‑100 ACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACC < 2:6734/100‑1 ACCGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATACCACACCCGAC > 1:2554653/1‑99 CGGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAA > 1:962791/1‑100 GGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAA > 1:969455/1‑100 GGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAA > 1:495431/1‑100 GGATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCA < 1:816842/98‑1 GATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAAG > 1:2033316/1‑100 GATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAAG < 1:1747666/100‑1 GATGACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAAG < 2:61570/100‑1 TGGAAAATGTGGAAGAGGGCGGATTCTTTGGTCGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/881838‑881947‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaccggatgACGTTTCGCGCCATCCGGTTATCAGAAGATTAAGAGAACCAGCTGCCGAACCACTGATGGAATTTCATCATCACGAAATCCCACACCCGACCAAAG < NC_000913/881958‑881863 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |